Module 1 Organelles (Lesson 3) Flashcards

1
Q

What is the largest continuous membrane structure in a cell?

A

Endoplasmic Reticulum (ER)

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2
Q

What are the two types of ER?

A

Rough ER and Smooth ER

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3
Q

What structure is responsible for giving rough ER its “rough” appearance?

A

Ribosomes attached to its surface

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4
Q

What is the main function of the ER in protein synthesis?

A

It is the site where secretory and membrane proteins are synthesized, folded, and modified.

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5
Q

What type of ER is associated with lipid metabolism and detoxification?

A

Smooth ER

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6
Q

What protein family is responsible for shaping the curved ER membrane?

A

Reticulons

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7
Q

What small GTPase is responsible for ER membrane fusion?

A

Atlastin

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8
Q

What process ensures that only properly folded proteins leave the ER?

A

ER quality control mechanism

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9
Q

What post-translational modification is important for protein folding in the ER?

A

Glycosylation

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10
Q

What hereditary disease is associated with mutations in reticulons and atlastin?

A

Hereditary Spastic Paraplegia (HSP)

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11
Q

Why is the ER considered a continuous structure despite having distinct rough and smooth regions?

A

The ER is a single interconnected network, sharing a common luminal space, including connections to the nuclear membrane.

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12
Q

How do ER tubules maintain their shape despite phospholipid bilayers preferring a flat structure?

A

Reticulons insert into the membrane in a wedge-like fashion, inducing curvature.

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13
Q

What role do microtubules play in ER movement?

A

ER membranes extend, retract, and move along microtubules through motor protein interactions.

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14
Q

Why must ER targeting occur during protein synthesis for secretory proteins?

A

Because cotranslational translocation is required for proteins to enter the ER lumen as they are being synthesized.

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15
Q

How do glycosylation and disulfide bond formation contribute to protein quality control in the ER?

A

These modifications help ensure proper protein folding and stability, preventing misfolded proteins from leaving the ER.

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16
Q

Why do Type II and Type III membrane proteins have different orientations despite similar translocation mechanisms?

A

The positioning of positively charged residues around the signal-anchor sequence determines their orientation in the membrane.

17
Q

What happens to misfolded proteins in the ER?

A

They are targeted for degradation through the ER-associated degradation (ERAD) pathway.

18
Q

How does ER dysfunction contribute to neurodegenerative diseases like HSP?

A

Defects in ER membrane shaping and organization disrupt axon maintenance, leading to neuronal degeneration.

19
Q

How would you determine if a newly discovered protein is ER-targeted?

A

Look for an ER signal sequence at the N-terminus, perform co-translational translocation assays, or use fluorescence microscopy with ER markers.

20
Q

If a protein fails to fold properly in the ER, what experimental techniques could be used to study its fate?

A

Western blot for ubiquitinated proteins, proteasome inhibition assays, or fluorescent protein misfolding sensors.

21
Q

How could you artificially target a cytoplasmic protein to the ER?

A

Add an ER signal peptide sequence to its N-terminus.

22
Q

If a researcher mutates the signal recognition particle (SRP), what impact would this have on secretory protein synthesis?

A

Translation would be impaired, and proteins would fail to enter the ER, leading to mislocalization in the cytoplasm.

23
Q

What would happen to ER membrane structure if Atlastin function were inhibited?

A

The three-way branching of ER tubules would be disrupted, leading to fragmented and unconnected ER networks.

24
Q

If a drug inhibits glycosylation in the ER, how would this affect protein function?

A

Proteins may misfold or lose their proper function, leading to ER stress and degradation.

25
Q

How would you differentiate Type I, II, and III membrane proteins experimentally?

A

Use protease protection assays, immunofluorescence, or analyze sequence features like signal-anchor sequences and stop-transfer signals.

26
Q

If a patient has a mutation in reticulons, what cellular defects might you expect?

A

Abnormal ER morphology, reduced ER tubule formation, and potential neurological impairments.