Mock exam Flashcards
what are the organelles surrounded by a lipid membrane
- nucleus
- endoplasmic reticulum
- golgi apparatus
- mitochondria
what is the difference between cytosol and cytoplasm?
cytosol: fluid contained within the cytoplasm
cytoplasm: entire content within the cell membrane except the nucleus
elaborate on the asymmetry of the plasma membrane
- composition of membrane leaflets is highly uneven
- maintained by flippases and floppases
- extracellular leaflet: phosphatidylcholine, SM, phosphatidylserine, phosphatidylethanolamine
- CHL resides in cytoplasmic leaflet
- asymmetry creates a difference in orientation and positioning of proteins
- difference in lipids/protein/carb composition
what types of lipids and proteins are found in plasma membrane?
lipids: glycolipids/cholesterol/phospholipids
proteins: intrinsic (integral) /extrinsic (peripheral)
classify plasma membrane proteins based on their function
- structural proteins
- enzymes
- transport proteins
what is endocytosis and what are the different endocytic pathways?
endocytosis: process by which cells take in substances from outside of the cell by engulfing them in a vesicle
endocytic pathways
- pinocytosis
- receptor mediated endocytosis
- phagocytosis
what’s the difference between each endocytic pathway?
phagocytosis: engulfment of large particles that pinch off from the membrane to form a vacuole that surrouds the particle
receptor mediated endocytosis: ligands bind to cell surface receptors on membrane
pinocytosis: small vesicles dissolve small material in liquid
what are the general steps of phagocytosis?
- engulfment
- phagosome formation
- phagolysosome digestion
- expulsion of undigested material
what cells are capable of phagocytosis?
- neutrophils
- monocytes
- dendritic cells
- macrophages
- mast cells
what enzymes are found in lysosomes?
hydrolytic enzymes
e.g. proteases, nucleases, glycosidases, lipases, phospholipases, phosphatases, sulfatases
what is the role of iron in cells?
- electron transport chain of the mitochondria depends on iron as an electron acceptor/donor
- many enzymes of electron transport chain are iron dependent (cytochrome c/cytochrome oxidase/succinate dehydrogenase)
- it helps oxygenate blood cells and haemoglobin by binding oxygen thus aiding oxygen transport to tissues
what genes are critical for cancer?
oncogenes
tumor suppressor genes
what are apolipoproteins and what do they do?
proteins that bind lipids to form lipoproteins
they transport lipids in blood, CSF, and lymph
what diseases are caused by apolipoproteins?
- alzeheimer → amyloid beta peptide (APO E)
- parkinson’s → alpha synuclein (APO D)
- spongiform encephalopathies → prion proteins (APO E)
- familial amyloiditic polyneuropathy → transthyretin (APO A)
- huntington’s → polyQ
- familial amyotrophic lateral sclerosis → superoxide dismutase 1
define autophagy
destruction of damaged cellular components occuring in vacuoles within the cell
what is the role of the cytoskeleton in membrane traffic?
provides support and directionality
compare and contrast:
prokaryotes and eukaryotes
compare and contrast:
gram negative and gram positive bacteria
what are the different bacterial structures and what are their functions?
- pili → genetic exchange (conjugation)
- fimbrae → adhesins (attachment)/biofilm formation/hemagglutination
- flagella → motor movement/flagellin protein
- S-layer → increase robust/permeability barrier
- capsule/slime → barrier against antibacterials/dessication-phagocyte protection
what is the extracellular polysaccharide in
(1) pseudomonas aueriginosa
(2) leuconostoc mesateronides
- alginate
- dextran
what is the function of dextran
provides protection against external environment
enhances adhesion to solid surfaces
how do bacteria divide and grow?
most bacteria reproduce by binary fission
bacterial growth: change in population rather than size or mass
what is binary fission?
division into two identical daughter cells
what are the growth requirements for bacteria?
- warmth
- moist (water)
- proteins
- neutral or slightly acidic pH
- oxygen
what is microbial enumeration test?
quantative test that determines the total aerobic microbial count and total yeast and mold count present in test product
what are the methods available for microorganism enumeration?
- direct
- indirect
- viable
- total cell count
-
RMM:
- growth based
- direct measurement
- cell component analysis
what bacterial classes are there
- spherical (cocci)
- rod (bacilli)
- spiral (spirilla)
- coma (vibrois)
- corkscrew (spirochaetes)
why is bacterial identification important
because it is essential for correct diagnosis and treatment and trace back of disease outbreaks
what are some traditional and modern identification methods?
traditionals:
- cultivation (growth requirement)
- cultivation (selective agar)
- biochemical profiling
New/rapid:
- serological testing
- nucleic acid techniques
- MALDI TOF
draw a bacterial spore structure
how do sporulation and germination occur?
Spore is metabolically dormant structure produced during unfavorable condition by the process called sporulation. Sporulation occur during late log phase or early stationary phase. Under favorable condition spores germinate to give vegetative cell.
why are spores resistant to antimicrobials?
because they are highly dehydrated with no metabolic activity and their constituents of small acid soluble proteins dipicolinic acid and their multilayered structure
true or false
most spore forming bacteria are gram positive
true
define sterilization
process that kills all microorganisms including spores
which antibiotics are most likely to cause c.diff?
broad spectrum antibiotics like: cephalosporins/fluoroquinolones/ampicillin/amoxicillin/clindamycin
explain the cell cycle of chlamydia
- they alternate between infectious extracellular elementary body and reticulate body
- elementary bodies enter mucosal cells and differentiate to reticulate bodies in membrane bound compartment
- replication occurs, reticulate bodies redifferentiate into elementary bodies and released from host cell to infect other cells
what are the features of mycobacteria?
- hydrophobic cell wall, peptidoglycan linked to arabinogalactan esterfied to mycolic acid
- lipids 25% of dry weight
- mycolic acid, high molecular weight (3 hydroxy fatty acid)
- cord factor, parallel alignment of rows of bacilli
what treatments are available for TB
- isoniazid
- rifampicin
- pyrazinamide
- ethambutol
what are the common routes of infection?
- direct contact
- fomites
- aerosols
- oral
- vector borne
what is the normal flora?
microbes that are both helpful and potentially harmful occupying the a habitat (human)
what is a virulence factor?
microbial product that contributes to virulence
what is virulence?
intensity of pathogenicity of an organism
what are toxins?
substance of organisms that damage the host
what is an opportunistic pathogen?
organism that becomes pathogenic following a perturbation to a host / disruption of microflora
what is the difference between endotoxin and exotoxins?
endotoxins are toxic at high doses whereas exotoxins are can be extremely toxic at low doses.
endotoxins are released when bacterial cell dies
exotoxins produced during growth/division
what exotoxins are there?
neurotoxins
enterotoxins
cytotoxins
what is the toxic molecule of gram negative?
lipopolysaccharide molecule (Lipid A)
what’s the difference between DNA and RNA
what’s the difference between DNA polymerase and RNA polymerase
what factors affect antimicrobial treatment?
- bacterial status (resistance/biofilm/susceptibility)
- antimicrobial concentration and subinhibitory concentration
- host factors (serum effect/gut impact)
what are mycoses?
infections caused by fungus invading tissues and causing, superficial/subcutaneuous/systemic infections