Mixed Flashcards

1
Q

Diagnostic test for CF

A

pilocarpine iontophoresis. High levels of Cl (>60) and high Na (>60) in 100mg sweat

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2
Q

CFTR protein

A

Part of ATP binding cassette. Transmembrane ion channel than lets Cl through (also bicarb) - movement draws water with it
It found in plasma membrane (apical membrane) of multiple tissues, including cells linins lungs, liver, pancreas, intestines, reproductive tract and skin.
Gene is carried on chromosome 7

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3
Q

CFTR mutation classes

A
Class 1 is protein loss (G542X)
Class 2 is trafficking error (delta 508F)
Class 3 is functional loss (G551D)
class 4 is functional reduction
class 5 is protein reduction
class 6 is unstable (degraded easily)
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4
Q

Delta 508 F mutation

A

Phenylalanine deleted at 508, causes problem with trafficking protein to membrane. Severe mutation. Class II

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5
Q

G542 x CF mutation

A

Stop codon inserted at 542, premature end and no protein (class 1). Severe mutation

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6
Q

621 + 1G>T

A

mRNA splicing mutation in intron 4, results in loss of an exon. Class 1

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7
Q

CF modifier mutation increase bacterial infection risk

A

NOS1

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8
Q

CF modifier mutation increasing meconium ileus risk

A

CFM1

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9
Q

CF modifier mutation increasing GI phenotype risk

A

MUC1

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10
Q

CF modifier genes affecting pulmonary phenotype

A

TGF beta, HLAII, TNFA,MBL2

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11
Q

Gene therapy for CF

A

Could use viral vector (retrovirus or adenovirus) - but these had limited effects and increasing dose lead to inflammation
Adeno-associated viral vectors (AAVV)
being trialed, deemed safer in terms of immune response
Non-viral vectors include DNA fused to cationic liposome (encapsulates DNA, allows cell entry)

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12
Q

Barriers to gene therapy

A

Host immune response counters virus vectors
Resp epithelium has defences against infection (cilia, complement cellular and humoral immune)
Also get cytoplasmic degradation of non-viral vectors
These barriers limit the number of cells that can be affected by the therapy and therefore limit the response.

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13
Q

Which CF mutation classes cause no/not enough protein?

A

Class I, class II, class V (also class VI as degrades). So delta 508F (class II) and G542X / 621 + 1G>T(class I).

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14
Q

Which CF mutation classes cause no/reduced function

A

Class III and IV. G551D is Class III

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15
Q

Potentiators

A

e.g. ivacaftor
these increase the flow of Cl- through the CFTR bu binding in a non-conventional way
Improves lung function, reduce infective exacerbations, reduces sweat chloride and improves weight gain.(therefore fix theme III, V and VI)

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16
Q

Correctors:

A

e.g. VX809
these increase the synthesis, processing and/or delivery of CFTR proteins to the cell surface (these target theme I, II and IV)

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17
Q

Antenatal CF presentation

A

echogenic bowel, but not specific as can occur in CMV infection

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18
Q

Meconium ileus treatment

A
Gastrograffin enema (water soluble contrast)is diagnostic, and may also be therapeutic.
Can also add N/G tubel acetylcysteine (mucolytic agent) that helps dissolve meconium plug.
If these don't work, then surgery can be performed (defunctioning ileostomy)
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19
Q

CF screening

A

Heel prick checks IRT (immune reactive trypsin). If high, then screen for 4 common mutations.
If 2 mutations then CF
If 1 then screen for more. If find another then CF. If not then repeat IRT and see in clinic if raised.
If no mutations were found on initial mutation screen then repeat IRT and if raised then see in clinic.

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20
Q

CF resp infections

A

Viral risks include RSV, influenza (same as other babies)
Bacterial infections:
Early common infections:
- Haemophilus influenzae
- Staphylococcus aureus (particularly dangerous as destructive)
Late common infections:
- Pseudomonas aeroginosa
- Burkholderia cepacia
- Aspergilus, MRSA
Often, these infections become chronic.
Management is with antibiotics, guided by sputum culture (older patients) and cough swab (younger patients, unlikely to have sputum).
If no positive results, but symptomatic then cover them with antibiotics that are appropriate for their likely organisms.
High dose over long course (14 days ) - as difficult to penetrate the sputum.
If they don’t work orally then can use IV or inhaled antibiotics.
Babies born with CF now get put on antibiotic prophylaxis (flucloxacillin to prevent staph. Aureus). Used for first 3 years to prevent initial infection leading to chronic infection.
Although this reduces the risk of hospitalisation with S aureus later, there is concern that it may leave room for other organisms to take hold (currently under trial).
Other lung treatment
- Bronchodilators
- DNase (mucolytic) - nebulised drug used od. It cleaves DNA (DNA thick mucus secretions in CF). It improves expectoration, improves lung function, reduces infective exacerbations.
- Steroids (systemic)- can be useful acutely, and has effects when used long term (effects on growth). Inhaled steroids not useful.
- Oxygen supplementation (initially at night, but may progress to day use too)
Transplantation (big complication is obliterative bronchiolitis (seen in lung transplants in general, is overwhelming organ rejection and this is not CF specific))

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21
Q

CF - GI tract

A

Pancreatic insufficiency leads to malabsorption (fats + ADEK), and CF patients already have higher metabolic demand. Creon is given (pancreatic enzyme) with food (dose according to fat content). Sometimes NG needed to supplement.
Complications include DIOS - distal intestinal obstruction syndrome (equivalent of meconium ileus). Due to not enough pancreatic enzyme replacements, causes faecal retention. Present with RIF abdominal pain and RIF mass (could mimic an appendix problem/abcess).
Treatment is with Lactulose/acetylcystine/gastrograffin

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22
Q

CF: Liver disease

A

Can have gallstones.
Thick bile secretions cose scarring, fibrosis and cirrhosis (but liver is still functional). Leads to portal hypertension and oesophageal varcies.
Treatment is with Ursodeozycholic acid (reduce cholesterol in bile), shunts to reduce liver hypertension and transplant

23
Q

CF renal disease

A

Calculi can occur, but rare.
Many drugs and antibiotics are nephrotoxic, so increased risk of kidney damage. Pseudo-Barters syndrome can occur, this is a physiological compensation that can occur due to the loss of sodium and chloride through the skin. This compensation leads to metabolic alkalosis (associated with sodium and potassium depletion, body trying to retain more chloride to replace loss by allowing potassium and sodium excretion).

24
Q

CF fertility

A

Males often have bilateral absence of vas ddeferens. reduced fertility in females. May have issues with antibiotics or teratogenic drugs. Pregnancy used to be CI if FEV1<40% but no longer the case

25
Q

CF diabetes

A

Gradual decline in endocrine function. Don’t tend to get polyuria and polydipsia. or ketoacidosis. Tend to be insulin dependent but less than T1D as still have some endocrine function

26
Q

CF bone disease

A

Reduced D so predisposes to osteoporosis
Also, nutritional aspects
Also, exercise and weight bearing effects
Steroid use also decreases bone mass

27
Q

CF pseudomonas

A

Encapsulated, Gram-negative, rod-shaped bacterium
This is a milestone in the clinical CF course, with 80% of adults chronically infected.
Chronic infection is associated with serious disease and reduced survival.
Initial strains are non-mucoid phenotype.
Early aggressive treatment may delay chronic infection (mucoid type). Aggressive initial therapy is 3 week treatment of nebulised colomycin (aminoglycoside) and oral ciprofloxacin (one of few oral drugs active against pseudomonas - fluoroquinolones). This can keep pseudomonas away for some time, but eventually becomes chronically colonised.
Parenteral antibiotics can be used for chronically colonised patients: aminoglycosides, ceftazidime (cephalosporin), pipericillin, meropenem (carbapenem), aztreonam (monobactam). Given 2 week period, 3-4 times per year (
Repeated vascular access, so indwelling vascular device (Portacath) fitted.
Pseudomonas can be passed on between patients, and so chronic pseudomonas patients need to be kept separate from non-pseudomonas patients - has social impacts from segregation.

28
Q

CFSPID

A

CF screen positive indeterminate disease.
These patients have raised IRT, and have mutations identified - but, on examination, they look normal, have normal lung function, are pancreatic sufficient and have normal sweat tests.
In this situation, the outcome for them is unclear and there is no indication of their prognosis. But they still get monitored, even though it’s questionable if they have CF or not.

29
Q

CFQoL assessment

A

9 domains (physical function, social function, treatment issues, chest symptoms, emotional responses, body image, interpersonal relations, career concerns and future concerns)with 52 items to assess this (those items come from patient feedback, literature reviews, mdt consulation).
Scores are converted into values (0 (worst) to 100 (best))
<50 is negative, over 50 is positive.
These assessments are reliable, validated etc

30
Q

MUST score

A

Combines BMI, recent Hx of unplanned weight loss (5-10%+ from usual weight in 3-6 months) and acute disease effects (acutely ill or lower intake). This gives a score (0-6).
0 is low risk, routine clinical care with regular screening
1 is medium risk (observe)
2 or more is high risk and requires referral and treatment

MUST is a generic screening tool, so clinical judgement is needed (not all low BMIs are malnourished, not all high BMIs are well nourished.)

31
Q

Nutritional interventions in order

A

Range of interventions:

1) Poor appetite advice
2) Food fortification
3) Specialist diets
4) Nutritional supplements/products
5) Enteral nutrition (NG/NJ tube, short term feed (4-6 weeks), allows pyloric and non-pyloric feeding. Typically on pump infusion. Can be total or supplementary. Exclusive feeding through 6-12FR guage)
6) Parenteral nutrition (PEGs, RIGs are long term, ethe endoscopy/radio placed, either pump or bolus infusion. Can be total or supplementary. Needs daily tube care. Can be pyloric or post pyloric)

32
Q

Albumin in malnourishment

A

T1/2 is 14-20 days, only 5% produced faily, so consumption of protein has small effect only. Negative acute phase protein, affected by acute illness. Not good marker for malnourishment. Nutritional assessment is better

33
Q

Re-feeding syndrome

A

Idenfitify patients at risk (“starved” recently.
During starvation, body switches to ketones, causing phosphate shift and reduced insulin. Reintroduction of carbs causes insulin spike and large electrolyte shift from intra - > extracellular space.
Typified by marked hypophosphataemia, but may see Na abnormalities or fluid imbalance.
During refeeding, glycaemia leads to increased insulin and this stimulates glycogen, fat and protein synthesis. This requires phosphate, magnesium as well as cofactors such as thiamine. Insulin stimulates potassium uptake into cells via Na/K/ATPase symport, which also transports glucose. Magnesium and phosphate are also taken up, and water follows by osmosis.
This results in serum being depleted of phosphate, potassium and magnesium, all of which are depleted already through malnourishment.

34
Q

High risk of refeeding syndrome

A

anorexia nervosa, chronic alcoholism, oncology patients, postop patient, elderly patient, DM patients (uncontrolled), chronic malnutrition, long term antacid use (mg and aluminium salts bind phosphates), and long term diuretic use (loss of electrolytes)

35
Q

Management of refeeding

A

In order to manage at risk patients, check K/Ca/P/Mg levels, and give thiamine, multivitamin and vitamin B prior to feeding. Rehydrate carefully. Refeed at nmt 50% of energy requirements for patients who have eaten little/nothing in 5+ days.

36
Q

Clinical manifestations of refeeding syndrome

A

HF/arrhythmias, Resp failure, pulmonary oedema, Renal failure, GI distress, Muscle cramp/oedema, confusion, depression, hallucinations

37
Q

Risk factors for PE

A

Obesity, surgery, cancer, pregnancy, oestrogen (COC/HRT), immobility, long haul travel, smoking personal/Fhx

38
Q

PE signs and symptoms

A

SOB, fever (esp if ischaemia induced inflammation), pleuritic chest pain, sweaty, palpitations, anxiety, LOC/dizziness/fainting, haemoptysis.
Signs include shick (poor perfusion), tachycardia, tachyponoea, pleural rub, heart sound changes, leg swelling

39
Q

Investigations for PE

A
  • CXR (may look normal, may have unilateral oligaemia, may have consolidation from inflammation)
  • ECG - tachycardia, may be normal but may have RBBB or S1Q3T3 pattern
  • D dimer - may be raised, often elevated in several conditions

Echocardiogram - may see dilated right ventricle
- V/Q scan in young, low risk
CTPA is gold standard

40
Q

D Dimer

A

Fibrin degradation products
Very non specific. Raised in cancer, infection, haemorrhage, middle of pregnancy to 6 weeks post partum AS WELL as embolism.
Also, the older you get, the higher D dimer gets.

41
Q

WELLS score

A

takes into account age, GR, O2 sats, leg swelling, haemoptysis, trauma or surgery recently, previous DVT/PE, hormone use (COCP).
If 1-1.5, then exclude PE and consider alternative diagnosis
If 2-4, then can do D dimer. If normal then consider alternative diagnosis.
If raised then sPESI score to see if outpatient or inpatient management. Looking for tachycardia, systolic BP<100, hypoxic, age over 80, chronic lung/heart disease, cancer (Hx or active) - > in patient.

42
Q

Management of PE

A

If PE is high in ddx from previous pathway, then start anticoagulation with enoxeparin (1mg/kg BD - unless very overweight). Administer this, unless there is a major complication (E.g. very recent surgery).
Imaging. If over 50, CTPA. If under 50 then get V/Q scan.
If have answer, and patient has PE then continue with anticoagulation. Decide if want to move them to warfarin or NOACs.

If very unwell, and very clearly PE, then thrombolysis (clot busting) - use alteplase. If don’t thrombolyse them, then they can get pulseless electrical activi

43
Q

How can an adaptive immunity defect inhibit an innate immune response?

A

classical complement pathway is antibody mediated, so an adaptive defect may affect innate response

44
Q

Immune deficiency infections are:

A

Serious, persistant, unusual/uncommon, recurrent

45
Q

Graft vs Host disease

A

Complication of haematopoetic stem cell transplant. Has 3 phases: Phase 1 is APC activation (often aided by underlying pathology), phase 2 is donor T cell activation/proliferation and phase 3 is the resulting inflammation.
Causes maculopapular rash, N&V, diarrhoea, fever.
Treatment is with steroids. Prevention is with calcinuerin inhibitor/methotrexate.

46
Q

Primary antibody deficiencies

A

Example

  • x-linked agammaglobulinaemia (B cell defect- seen in Bruton’s disease)
  • Hyper IgM syndrome (class switching defect)
  • B cell to plasma cell development can be affected by CD4+ defects, cytokine defects
  • CVID (common variable immune deficiency) (most common primary antibody immunodeficiency, causes low levels of specific Igs)

These defects can lead to pulmonary infections (often bronchiectasis), GI issues (giardia) and malignancies

47
Q

Secondary antibody deficiencies

A

Can be due to lymphoproliferative disease, renal/gut loss of IgG, malnutrition, or drug induced etc

48
Q

Di George Syndrome/Thymic Hypoplasia

A

Defect of the 3rd and 4th pharyngeal arches
Can affect:
- Parathyroids (causes hypocalcaemia)
- Great vessels (congenital heart disease)
- Face (dysmorphic features)
-Thymus (T cell deficiency - increase risk of fungal and viral infections
Caused by deletion on long arm of Chromosome 22

49
Q

HIV binding modes

A

GP120 binds to CD4+ on Th, dendritic cells, macrophages
Virus binding also mediated through co-receptors (CCR5 co-receptor, found on T cells, Dendritic cells and macrophages, targeted by R5 virus; CXCR4 co-receptor, found on activated T cells, targeted by X4 virus).
Gp41 allows viral fusion with the target cell.
The R5 virus is preferentially transmitted by sexual contact as this enables it to infect dendritic cells and monocytes within the mucosae.
If dendritic cells pick up the virus in epithelia then they can transfer it to T cells in lymphoid tissues.
However, once infected, CD4+ T cells are the major HIV source throughout the infection.
In about 50% of cases, during late infection, there is a switch from R5 to X4 types.
Dendritic cells and macrophages tend to migrate and spread the infection to other tissues (e.g. the brain).

50
Q

HIV depletes CD4+ cells by

A
  • Virus induced lysis
    • Syncitia formation (fusion of virally infected cells with non-infected cells)
    • Immune killing (CD8+ Tc, NK/ADCC stimulated to kill virus infected cell)
    • Induction of apoptosis
      Thymic impairment
51
Q

Severe Combined Immune Deficiency (SCID)

A

Primary, inherited defect reducing B and T cells
There are several subtypes.
In terms of clinical presentation, it presents in first year of life and shows increased susceptibility to infections of all types (fungi, virus, bacterial (e.g. disseminated BCG), protozoa (oneumocystis), failure to thrive, diarrhoea and can also have graft vs host disease.
It is fatal if not treated, needs either bone marrow transplant (curative) or gene therapy (more future based medicine)

52
Q

Neutrophil defects

A

Can be lack of production (e.g. Kostman’s, cyclical neutropenia or secondary through chemo/infections).
Can also be excess destruction
Can also be functional problem (e.g. extrinsic (adhesion/migration/longetivity ) or intrinsic (e.g. impaired killing ability)
Signs include chronic granulomatous diseases (bacterial infections (often with abscesses) of skin, lymph nodes, ears, lungs, liver and bone. Can also get fungal infections.

53
Q

Complement Deficits

A

Can be regulatory defect (e.g. C1q inhibitor causes hereditary angiooedema)
Could also be with the complement proteins themselves (E.g. immune complex disease (causes inability to remove used up immune complexes), MAC complex loss (increased susceptibility to diseases like Neisseria).

54
Q

Causes of Secondary Immune Deficiency

A
  • Could be iatrogenic (with immunosuppressive treatment, but also with ablation/removal of lymphoid tissue by radiation/surgery).
    • Could be with malignancy of immune system (leukaemia, lymphoma or myeloma)
    • Some infections (HIV, chronic malaria, measles)
    • Malnutrition
    • Protein losing diseases
    • Some chronic diseases (E.g. chronic renal failure)
      Burns