Mixed Flashcards

Biological molecules ✔ Cells

1
Q

Endopeptidases and exopeptidases are involved in the hydrolysis of proteins.
Name the other type of enzyme required for the complete hydrolysis of proteins to amino acids.

A

Dipeptidase

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Suggest and explain why the combined actions of endopeptidases and exopeptidases are more efficient than exopeptidases on their own.

A

Endopeptidase hydrolyse the peptide bonds in the middle of the protein.
Exopeptidase hydrolyse the peptide bonds at the end of the protein.
More efficient because their are more ends for the exopeptidase to hydrolyse.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

figure 1 shows the co-transport mechanism for the absorption of amino acids into the blood by a cell lining the ileum. The addition of a respiratory inhibitor stops the absorption of amino acids.
Use Figure 1 to explain why.

A

A respiratory inhibitor will lead to less ATP produced this means no active transport. Therefore the sodium ions cannot be uptaken or leave the cell. This will lead to their being no concentration gradient for the sodium ions to be uptaken with amino acid. Therefore stopping absorption of amino acid.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

The pieces of leaf tissue examined were very thin.

Explain why this was important.

A

The leaf tissue being very thin means there are less layers of cell therefore light can pass through

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Give two reasons why it was important that the student counted the number of stomata in several parts of each piece of leaf tissue.

A
  1. This means the sample is representative

2. This means the mean of the results will be more reliable for comparison

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What are the three ways a pathogen can damage hosts cells?

A

1) rupturing them to release nutrients inside them
2) breaking down nutrients inside the cell for their own use. This starves and eventually kills the cell.
3) replicating inside the cells and bursting them when they’re released

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What are the two ways pathogens cause disease?

A

1) production of toxins

2) cell damage

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What are the three surfaces of contact- where pathogens enter our body? and how do they get in?

A

1) gas-exchange system = if you breathe in air that contains pathogens, most of them will be trapped in mucus lining the lung epithelium. Some pathogens are able to reach the alveoli where they can invade cells and cause damage.
2) Skin = if you damage your skin, pathogens on the surface can enter your bloodstream. blood clots prevent pathogens from entering.
3) Digestive system = if you eat or drink food that contains pathogens. Some will survive from the acidic conditions of the stomach, and invade cells of the gut wall and cause disease.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Explain the process of phagocytosis.

A

1) A phagocyte recognises the antigens on a pathogen
2) The cytoplasm of the phagocyte moves round the pathogen, engulfing it.
3) The pathogen is now contained in a vacuole or a vesicle in the cytoplasm of the phagocyte.
4) A lysosome fuses with the phagocytic vacuole and the lytic enzymes break down with the pathogen
5) The phagocyte presents the pathogens antigens, it sticks the antigens on its surface to activate other immune system cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What is the cellular and humoral response?

A

Cellular = The T-cells and other immune system cells that they interact with e.g phagocytes , form the cellular response

Humoral - B cells and the production of antibodies form the humoral response.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Explain what is meant by a primary response.

A

The primary response is slow because there aren’t many B-cells that can make the antibody needed to bind to it.

The infected person will show symptoms of the disease while the body produces enough of the right antibody to overcome the infection.

T-cells and B-cells produce memory cells. Memory T-cells remember the specific antigen and will recognise it second time round. Memory B-cells record the specific antibodies needed to bind the antigen.

The body is now immune.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Explain what is meant by the secondary response.

A

If the same pathogen enters the body again, the immune system will produce a quicker, stronger immune response.

Memory B-cells divide into plasma cells that produce the right antibody to the antigen. Memory T-cells divide into the correct type of T cells to kill the cell carrying the antigen.

The secondary response often gets rid of the pathogen before you begin to show any symptoms.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Explain how monoclonal antibodies target cancer

A

1) Cancer cells have antigens called tumour markers that are not found on body cells.
2) Monoclonal antibodies can be made that will bind to the tumour markers.
3) You can also attach anti-cancer drugs to the antibodies
4) Antibodies come into contact with the cancer cells and bind to the tumour markers
5) This means the drug will acuumulate in the body where there are cancer cells.
6) side effects of an antibody based drug are lower than other drugs because they accumulate near specific cells

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

how do monoclonal cells work in pregnancy tests?

A

1) The application area contains antibodies for hCG bound to a coloured bead
2) when urine is applied to the application area any hCG will bind to the antibody on the beads, forming an antigen-antibody complex.
3) the urine moves up the stick to the test strip, carrying any beads with it
4) the test strip contains antibodies to hCG that are stuck in place.
5) if there is hCG present the test strip turns blue because the immobilised antibody binds to any hCG. if no hCG is present, the beads will pass through the test area without binding to anything so it won’t go blue.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

How do vaccines protect individuals and populations against disease?

A

Vaccines contain antigens that cause your body to produce memory cells against a particular pathogen, without the pathogen causing disease. This means you become immune without getting the symptoms.

Vaccines protect individuals because they reduce the occurance of the disease. Those not vaccinated are less likely to catch the diease because there are fewer people to catch it from - this is called herd immunity.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Explain the primary, secondary, tertiary and quaternary structure of a protein.

A

Primary structure = A sequence of amino acids in the polypeptide chain

Secondary structure = Hydrogen bonds form between the amino acids. This makes it coil or fold.

Tertiary structure = The coiled or folded chain is coiled or folded furthur. More bonds form between different parts of the polypeptide chain. For proteins made from a single polypeptide chain, It forms their final 3D structure

Quaternary structure = the way the polypeptide chains are assembled together. Several different polypeptide chains held together by bonds. For proteins made from more than one polypeptide chain this is their final 3D structure

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Describe the test for proteins.

A

1) add sodium hydroxide solution
2) add a few drops of copper (II) sulfate solution
3) if theres protein = it will go purple
if theres no protein = it will stay blue

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Describe three functions of proteins:

A

REMEMBER EAST:
Enzymes = break down large food molecules or help to synthesise large molecules

Antibodies = involved in the immune response, they have variable regions.

Structural proteins = physically strong. They consist of long polypeptide chains lying parallel to each other with cross links between them.

Transport proteins = transport ions and molecules across membranes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

Describe the cause and symptoms of lactose intolerance

A

When you don’t have enough of the enzyme lactase, you can’t break down lactose in milk properly.

undigested lactose is fermented by bacteria and can cause a whole host of intestinal complaints such as stomach cramps, excessive flatulence and diarrhoea

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

Describe the test for reducing sugars

A

Add benedicts and heat

if the sample contains reducing sugars = will turn red

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Describe the test for non-reducing sugars

A

1) boil with hydrocholric acid and neutralise with sodium hydrogencarbonate.
2) carry out the benedicts test as if you would for the reducing sugars test.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Describe the test for starch

A

1) Add iodine dissolved in potassium iodide solution

2) if there is starch = will turn a blue-black colour

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

Explain the effect of temperature on enzymes.

A

1) The rise in temperature makes the enzymes molecules vibrate more
2) If the temperature goes above a certain level, this vibration breaks some of the bonds that hold the enzyme in shape
3) The active site changes shape and the enzyme and subtrate no longer fit together
4) At this point, the enzyme in denatured

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

Explain the effect of PH on enzymes

A

1) All enzymes have an optimum PH value
2) Above and below the optimum PH, the H + and OH - ions can mess up the ionic and hydrogen bonds that hold the enzymes tertiary structure in place.
3) The active site changes shape, so the enzyme is denatured

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Q

Explain the effect of substrate concentration on enzymes.

A

1) the higher the substrate concentration, the faster the reaction.
2) More substrate molecules means a collision between substrate and enzyme is more likely
3) This only happens until the saturation point, when there are too many substrates, all active sites are full and adding more makes no difference

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
26
Q

Explain What a competitive inhibitor is

A

1) Competitive inhibitors compete with the substrate to bind to the active site but no reaction takes place.
2) Instead they block the active site so that no subtrate molecule can fit in it
3) If theres a high concentration of the inhibitor, it’ll take up nearly all the active sites and hardly any of the substrate will get to the enzyme.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
27
Q

Explain what a non-competitive inhibitor is.

A

1) non-competitive inhibitor molecules bind to the enzyme away from its active site
2) This causes the active site to change shape so the substrate molecules can no longer bind to it.
3) They dont compete with the substrate molecules to bind to the active site because they are a different shape.
4) increasing the concentration wont make any difference - enzyme activity will still be inhibited.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
28
Q

Explain the function of the:

1) plasma membrane
2) nucleus
3) lysosome
4) ribosome

A

1) regulates the movement of substances in and out of the cell
2) The pores allow substances to move between the nucleus and cytoplasm, the nucleolus makes ribosomes.
3) Contains digestive enzymes. These are kept seperate from the cytoplasm by the surrounding membrane and can be used to digest invading cells or to break down worn out components of cell.
4) The site where proteins are made.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
29
Q

Explain the functions of:

1) endoplasmic recticlum
2) golgi apparatus
3) microvilli
4) mitochondrion

A

1) synthesises and processes lipids
2) Processes and packages lipids and proteins. it also makes lysosomes
3) They increase the surface area of the plasma membrane - found on cells involved in processes such as absorption
4) the site of aerobic respiration

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
30
Q

Explain the process of cell fractionation

A

1) homogenisation = breaking up the cells = by vibrating the cells or grinding the cells, this breaks up the plasma membrane and releases the organelles into solution
2) filtration = getting rid of the big bits = by filtering through a gauze to seperate any large debris or tissue debris.
3) ultracentrifuguation = seperating the organelles = to seperate a particular organelle from all the others.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
31
Q

Explain the process of ultracentrifugation.

A

1) Cell fragments are poured into a tube. The tube is put in a centrifuge and is spun at low speed. The heaviest organelles get flung to the bottom of the tube by the centrifuge.
2) the supernatent (fluid above sediment) is drained off, poured into another tube and spun in the centrifuge at a higher speed. the heaviest organelles form a pellet at the bottom, the supernatant is drained and spun at a higher speed.
3) The process in repeated at higher speeds until all the organelles are seperated.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
32
Q

Explain what order organelles are seperated in ultracentrifugation

A

1) nuclei
2) mitochondria
3) lysosome
4) endoplasmic recticulum
5) ribosomes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
33
Q

Explain the two types of microscope - light and electron

A

light =
they have a lower resolution than electron microscopes
they use light

Electron microscopes =
They use electrons
they have a higher resolution so give a more detailed image

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
34
Q

Explain the strengths and weaknesses of the transmission scanning microscope and the scanning electron microscope

A

TEM = good because they give high resolution images, but bad because they can only use thin specimens

SEM = good because they can be used on thick specimens but bad because they give a lower resolution

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
35
Q

Explain what an aneurysm is

A

Aneurysm is a balloon-like swelling of the artery. Atheroma plaques damage and weaken arteries, they narrow arteries increasing blood pressure.

When blood travels through a weakened artery at high pressure, it may push inner layers through the outer elastic layer to form an aneurysm.

This may burst - causing a haemorrahage

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
36
Q

Explain what thrombosis is.

A

Thrombosis is a formation of a blood clot.
An atheroma plaque can rupture the endothelium damaging the artery wall and leaving a rough surface

platelets and fibrin accumulate at the site of damage and form a blood clot

This blood clot can cause a complete blockage of the artery or it can become dislodged and block a blood vessel elsewhere in the body.

Debris from the rupture can cause another blood clot to form furthur down the artery.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
37
Q

Explain what atheroma is.

It blocks the lumen of the artery and restricts blood flow, which causes blood pressure to increase.

A

If damage occurs to the endothelium, white blood cells and lipids clump together to form fatty streaks.

over time, white blood cells, lipds and connective tissue builds up and hardens to form an atheroma - a fibrous plague.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
38
Q

Explain the process of the cardiac cycle.

A

1) The sino-atrial node (SAN) sends out impulses across atrial walls
2) This causes the right and left atria to contract at the same time / causes atrial systole
3) impulses can not cross to ventricles due to non conducting tissue
4) Waves of electrical activity are transferred from the SAN to the atrioventricular node (AVN)
5) new impulse travels down bundle of His
6) slight delay before the AVN reacts to make sure ventricles contract after atria empty
7) bundle of His conducts impulses to the purkyne fibres.
8) purkyne fibres carry the impulses to the muscular walls of the right and left ventricles causing ventricles to contract from bottom up.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
39
Q

Describe what happens in inspiration and expiration in the lungs.

A

1) the intercostal and diaphragm muscles contract.
2) this causes the ribcage to move upwards and downwards and the diaphragm to flatten increasing the volume of the throax
3) As the volume of the throax increases, the lung pressure decreases.
4) This causes air to flow into the lungs. Inspiration requires energy.Expiration_
1) The intercostal and diaphragm muscles relax
2) the ribcage moves downwards and inwards and the diaphragm becomes curved again
3) the thorax volume decreases, causing the air pressure to increase
4) air is forced out of the lungs. it doesnt require energy_

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
40
Q

Explain what happens when someone gets cholera

A

1) The toxin causes chloride ion protein channels in the plasma membranes of the small intestine epithelial cells to open.
2) chloride ions move into the small intestine lumen. The build up of chloride ions lowers the water potential of the lumen.
3) water moves out of the blood across the epithelial cells and into the small intestine lumen by osmosis.
4) the increase in water secretion in intestine leads to diarrhoea causing the body to become dehydrated.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
41
Q

Describe the chemical reactions involved in the conversion of polymers to monomers and monomers to polymers.

Give two named examples of polymers and their associated monomers to illustrate your answer (5 marks)

A
  1. A condensation reaction joins monomers together and forms a (chemical) bond and releases water
  2. A hydrolysis reaction breaks the (chemical) bond between monomers and uses water
  3. A suitable example of polymers and monomers from which they are made
  4. A second suitable example of polymers and the monomers from which they are made
  5. Reference to a correct bond within a named polymer

Suitable Example =

Amino Acids –> Polypeptide/Protein/Enzyme/Antibody

Nucleotides –> Polynucleotide/DNA/RNA

Alpha Glucose –> Starch/Glycogen

Beta Glucose –> Cellulose

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
42
Q

Describe how the structures of starch and cellulose molecules are related to their functions. (5 marks)

A

Starch (max 3)

  1. Helical/spiral shape so compact;
  2. Molecule is insoluble so osmotically inactive (does not affect water potential)
  3. Branched so glucose is easily accessible by enzymes to break down for respiration;
  4. Large molecule so cannot leave cell/cross cell-surface

membrane

Cellulose (max 3)

  1. Long, straight & unbranched chains of β glucose;
  2. Joined by hydrogen bonding, to form (micro/macro) fibrils
  3. These provide rigidity/strength;
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
43
Q
Describe the structure of a cellulose molecule and explain how cellulose is adapted for its function
in cells (6 marks)
A
  1. made from β-glucose;
  2. joined by condensation to form glycosidic bond;
  3. 1 : 4 link described;
  4. “flipping over” of alternate molecules;
  5. hydrogen bonds linking long straight chains;
  6. cellulose makes cell walls strong;
  7. can resist turgor pressure/osmotic pressure;
  8. bond difficult to break;
  9. resists action of enzymes
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
44
Q

Describe the structure of proteins (5 marks)

A
  1. Polymer of amino acids;
  2. Joined by peptide bonds;
  3. That are formed by condensation;
  4. Primary structure is the order of amino acids;
  5. Secondary structure is folding of polypeptide chain due to hydrogen bonding;
  6. Tertiary structure is 3-D folding due to hydrogen bonding and ionic / disulfide
    bonds;
  7. Quaternary structure is two or more polypeptide chains
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
45
Q

ATP is useful in many biological processes. Explain why (4 marks)

A
  1. Releases energy in small & easily manageable amounts;
  2. Broken down in a one step reaction which makes sure energy is available rapidly;
  3. Phosphorylates substances to make them more reactive
  4. Reformed/made again rapidly
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
46
Q

Describe the biochemical tests you would use to confirm the presence of lipid, non-reducing sugar and amylase in a sample (5 marks)
LIPID

A
  1. Add ethanol/alcohol then add water and shake/mix
  2. White/Milky emulsion

NON-REDUCING SUGAR

  1. Do Benedict’s Test and stays blue/negative
  2. Boil with acid then neutralises with alkali
  3. Heat with Benedict’s and becomes red/orange (precipitate)

AMYLASE

  1. Add biuret (reagent) and becomes purple/vioelt/mauve/lilac
  2. Add starch, (leave for time), test for reducing sugar/absence of starch
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
47
Q

Haemoglobins are chemically similar molecules found in many different species. Differences
in the primary structure of haemoglobin molecules can provide evidence of phylogenetic
(evolutionary) relationships between species.
Explain how. (5 marks)

A
  1. Mutations change base / nucleotide (sequence);
  2. (Causing) change in amino acid sequence;
  3. Mutations build up over time;

4.More mutations / more differences (in amino acid/ base / nucleotide sequence / primary
structure) between distantly related species;
OR
Few(er) mutations / differences (in amino acid / base / nucleotide sequence / primary structure) in
closely related species;

5.Distantly related species have earlier common ancestor;
OR
Closely related species have recent common ancestor;

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
48
Q

Describe the roles of iron ions, sodium ions and phosphate ions in cells (5 marks)

A

IRON IONS
1. Haemoglobin binds/associates with oxygen

SODIUM IONS

  1. Co-transport of glucose/amino acids (into cells)
  2. (Because) sodium moved out by active transport/sodium potassium pump
  3. Creates a sodium ion concentration/diffusion gradient
  4. Affects osmosis/water potential

PHOSPHATE IONS

  1. Affects osmosis/water potential
  2. Joins nucleotides/in phosphodiester bond/in backbone of DNA/RNA/in nucleotides
  3. Used in/to produce ATP
  4. Phosphorylates other compounds (usually) making them more reactive
  5. Hydrophilic/water soluble part of phospholipid bilayer/membrane
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
49
Q

Explain five properties that make water important for organisms (5 marks)

A
  1. A metabolite in condensation/hydrolysis/photosynthesis/respiration
  2. A solvent so (metabolic) reactions can occur
  3. High heat capacity so buffers changes in temperature
  4. Large latent heat of vaporisation so provides a cooling effect (through evaporation)
  5. Cohesion (between water molecules) so supports columns of water (in plants)
  6. Cohesion (between water molecules) so produces surface tensions supporting (small) organisms
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
50
Q

Describe the induced fit model of enzyme action. (2 marks)

A

Active site of enzyme is not complementary;

Active site is flexible & can mould around the substrate;

Change in enzyme allows substrate to fit and form an E-S complex

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
51
Q

Explain why maltase:
• only breaks down maltose
• allows this reaction to take place at normal body temperature.
(5 marks)

A
  1. Specific Tertiary structure enzyme (means)
  2. Active site is only complementary to maltose
  3. Description of induced fit;
  4. Enzyme is a catalyst which lowers the activation energy required for the reaction
  5. By forming an enzyme-substrate complex;
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
52
Q

Describe competitive and non-competitive inhibition of an enzyme (5 marks)

A
  1. Inhibitors reduce binding of enzyme to substrate & prevent the formation of E-S complexes

(Competitive inhibition),

  1. Inhibitor has a similar shape to substrate;
  2. It binds to the active site (of enzyme);
  3. Inhibition can be overcome by adding more substrate;

(Non-competitive inhibition),

  1. Inhibitor binds to a site on enzyme other than active site;
  2. This changes the shape of the active site
  3. Inhibition cannot be overcome by adding more substrate
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
53
Q

Describe the role of the enzymes of the digestive system in the complete breakdown of starch
(5 marks)

A

Amylase (mouth);
Breaks down starch to maltose

Maltase (Small Intestine);
Breaks down maltose to glucose
Hydrolysis of starch involves breaking of glycosidic bond

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
54
Q

Describe the processes involved in the absorption of the products of starch digestion (5
marks)

A

Sodium removed from epithelial cell by active transport/sodium- potassium pump;

Into blood;

Maintaining low concentration of sodium in the epithelial cell compared to the
lumen;

Glucose moves in to the epithelial cell with sodium
Via carrier/channel protein
Glucose moves into blood;

By (facilitated) diffusion

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
55
Q

Describe how proteins are digested in the human gut (4 marks)

A
  1. Hydrolysis of peptide bonds;
  2. Endopeptidases break polypeptides into smaller peptide chains;
  3. Exopeptidases remove terminal amino acids;
  4. Dipeptidases hydrolyse dipeptides into amino acids.
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
56
Q

The epithelial cells that line the small intestine are adapted for the absorption of glucose.
Explain how. (6 marks)

A
  1. Microvilli provide a large surface area;
  2. Many mitochondria produce ATP for active transport;
  3. Carrier proteins present for active transport;
  4. Channel / carrier proteins for facilitated diffusion;
  5. Co-transport of sodium and glucose achieved through carrier protein for sodium (ions) and glucose;
  6. Membrane-bound enzymes digest disaccharides to produce glucose;
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
57
Q

The movement of substances across cell membranes is affected by membrane structure. Describe how. (5 marks)

A
  1. Phospholipid (bilayer) allows movement/diffusion of non-polar/lipid-soluble substances
  2. Phospholipid (bilayer) prevents movement/diffusion of polar/lipid-insoluble substances
  3. Carrier proteins allow active transport
  4. Channel/carrier proteins allow facilitated diffusion/co-transport
  5. Shape/Charge of channel/carrier determines which substances move
  6. Number of channels/carriers determines how much movement
  7. Membrane surface area determines how much diffusion/movement
  8. Cholesterol affects fluidity/rigidity/permeability
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
58
Q

Explain how the structure of DNA is related to its functions (6 marks)

A
  1. Sugar-phosphate (backbone) is double stranded into a helix so provides strength &
    stability (protects bases);
  2. Long / large molecule so can store lots of information;
  3. Helix / coiled so compact;
  4. Base sequence allows information to be stored (protein formation);
  5. Double stranded so replication can occur semi-conservatively as existing
    strands can act as templates via complementary base pairing
  6. Weak hydrogen bonds for replication and strand separation
    OR
    many hydrogen bonds so stable/strong;
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
59
Q

Describe and explain how the structure of DNA results in accurate replication (4 marks)

A
  1. Two strands therefore semi-conservative replication;
  2. base pairing held together by hydrogen bonds
  3. hydrogen bonds weak so easily broken, which allows strands to separate;
  4. bases exposed and act as a template;
  5. A with T, C with G;
  6. DNA made has one parent strand and one new strand
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
60
Q
Messenger RNA (mRNA) is used during translation to form polypeptides. Describe how mRNA is
produced in the nucleus of a cell. (5 marks)
A
  1. DNA Helicase;
  2. Breaks hydrogen bonds between base pairs, exposing them;
  3. Only one DNA strand acts as a template;
  4. RNA nucleotides attracted to exposed bases;
  5. (Attraction) according to base pairing rule (A-U & C-G);
  6. RNA polymerase joins the RNA nucleotides together, to form pre-mRNA;
  7. Pre-mRNA is spliced to remove introns, forming mRNA
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
61
Q

Starting with mRNA in the nucleus of a cell, describe how a molecule of protein is synthesised.
(6 marks)

A
  1. mRNA leaves the nucleus through nuclear pore;
  2. Enters the ribosome;
  3. tRNA molecules bring amino acids to the ribosome;
  4. A specific tRNA molecule exists for a specific amino acid;
  5. Anticodon of tRNA complementary to codon on mRNA;
  6. Peptide bonds form between adjacent amino acids;
  7. tRNA detaches and leaves to collect another amino acid;
  8. Ribosome moves along mRNA
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
62
Q

Explain how a mutation can result in the production of a non-functional protein receptor (4 marks)

A
  1. Change in DNA base sequence;
  2. Change in amino acid sequence;
  3. This alters position of hydrogen/ionic/disulfide bonds;
  4. And causes a change in the tertiary structure (of receptor);
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
63
Q

Describe the behaviour of chromosomes during mitosis and explain how this results in the production of
two genetically identical cells. (7 marks)

A
  1. chromosomes shorten & thicken;
  2. chromosomes made from two identical chromatids, due to replication in interphase;
  3. chromosomes move to equator of the cell;
  4. Chromosomes attach to individual spindle fibres;
  5. Spindle fibres contract & the centromeres divide;
  6. Sister chromatids move to opposite poles;
  7. Each pole receives all the genetic information;
  8. Nuclear envelope re-forms around each group of chromosomes
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
64
Q

Describe what happens to chromosomes in meiosis (6 marks)

A
  1. Chromosomes shorten & thicken;
  2. Chromosomes associate into their homologous pairs;
  3. Crossing-over occurs between chromosomes, through the formation of a chiasma;
  4. Chromosomes join to spindle fibres, via there centromeres
  5. Whilst at the equator
  6. Homologous chromosomes move to opposite poles
  7. Pairs of chromatids separated in 2 nd division;
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
65
Q

Meiosis results in genetic variation in the gametes which leads to variation in the offspring formed
by sexual reproduction. Describe how meiosis causes this variation and explain the advantage of
variation to the species. (5 marks)

A
  1. Crossing-over;
  2. Independent assortment (segregation of homologous chromosomes) in meiosis I;
  3. Independent assortment (segregation of chromatids) in meiosis II;

+ Any three from:
4. Causes individuals to have different adaptations making some better adapted;

  1. Better adapted survive;
  2. To reproduce;
  3. These pass on the gene / allele;
  4. Allows for changing environment / different environment
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
66
Q

Describe and explain how selection will have affected the genetic diversity of a species (2 marks)

A
  1. Diversity reduced as fewer different alleles present creating a smaller gene pool;
  2. As alleles have been chosen or rejected;
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
67
Q

Describe how you could make a temporary mount of a piece of plant tissue to observe the position
of starch grains in the cells when using an optical (light) microscope. (4 marks)

A
  1. Add drop of water to glass slide;
  2. Obtain thin section of plant tissue and place on slide;
  3. Stain with iodine in potassium iodide.
  4. Lower cover slip using mounted needle
68
Q

Describe and explain how cell fractionation and ultracentrifugation can be used to isolate
mitochondria from a suspension of animal cells. (5 marks)

A
  1. Cell homogenisation to break open cells;
  2. Filter to remove large debris / whole cells;
  3. Use isotonic solution to prevent damage to mitochondria/organelles;
  4. Keep cold to reduce damage by enzymes/ use buffer to prevent enzyme denaturation;
  5. Centrifuge at lower speed to separate nuclei / cell fragments / heavy organelles;
  6. Re-spin (supernatant / after nuclei / pellet removed) at higher speed to get
    mitochondria at bottom.
69
Q

Describe the principles and the limitations of using a transmission electron microscope to
investigate cell structure. (5 marks)

A

Principles:

  1. Electrons pass through thin specimen;
  2. Denser parts absorb more electrons;
  3. So denser parts appear darker;
  4. Electrons have short wavelength so give high resolution;

Limitations:

  1. Cannot look at living material / Must be in a vacuum;
  2. Specimen must be very thin;
  3. Artefacts present;
  4. Complex staining method / complex / long preparation time;
  5. Image not in 3D / only 2D images produced
70
Q

Scientists use optical microscopes and transmission electron microscopes (TEMs) to investigate cell structure.
Explain the advantages and the limitations of using a TEM to investigate cell structure. (5 marks)

A

Advantages:
1 Small objects can be seen;
2 TEM has high resolution as wavelength of electrons shorter;

Limitations:
3 Cannot look at living cells as cells must be in a vacuum / must cut section / thin specimen;
4 Preparation may create artefact
5 Does not produce colour image;

71
Q

Many different substances enter and leave a cell by crossing its cell surface membrane. Describe
how substances can cross a cell surface membrane.(5 marks)

A
  1. Simple / facilitated diffusion from high to low concentration;
  2. Small / non-polar / lipid-soluble molecules pass via phospholipids / bilayer;
    OR
    Large / polar / water-soluble molecules go through proteins;
  3. Water moves by osmosis from high water potential to low water potential;
  4. Active transport against concentration gradient;
  5. Active transport/facilitated diffusion involves proteins /carriers;
  6. Active transport requires energy / ATP;
  7. Ref. to Na + / glucose co-transport
72
Q

Oxygen and chloride ions can diffuse across cell-surface membranes. The diffusion of
chloride ions involves a membrane protein. The diffusion of oxygen does not involve a
membrane protein.
Explain why the diffusion of chloride ions involves a membrane protein and the diffusion of oxygen
does not. (5 marks)

A
  1. Chloride ions water soluble/charged/polar;
  2. Cannot cross lipid bilayer;
  3. Chloride ions transported by facilitated diffusion using
    channel/carrier protein;
  4. Oxygen not charged/non-polar;
  5. Oxygen soluble in/can diffuse across lipid bilayer;
73
Q

The epithelial cells that line the small intestine are adapted for the absorption of glucose. Explain
how. (6 marks)

A
  1. Microvilli provide an increased surface area;
  2. Many mitochondria produce ATP / release or provide energy for active
    transport;
  3. Carrier proteins for active transport;
  4. Channel/carrier proteins for facilitated diffusion;
  5. Co-transport of sodium ions and glucose using a symport / carrier protein;
  6. Membrane-bound enzymes digest disaccharides to produce glucose;
74
Q

What is an antigen? (2 marks)

A

Protein on surface/membrane (of cell);

causes an immune response

75
Q

Describe the difference between active and passive immunity. (5 marks)

A
  1. Active involves memory cells, passive does not;
  2. Active involves production of antibody by plasma cells / memory cells;
  3. Passive involves antibody introduced into body from outside;
  4. Active long term, because antibody produced in response to antigen;
  5. Passive short term, because antibody given is broken down;
  6. Active can take time to develop / work, passive fast acting.
76
Q

When a pathogen enters the body it may be destroyed by phagocytosis. Describe how. (4 marks)

A
  1. Phagocyte recognises foreign antigen;
  2. Pathogen engulfed / ingested;
  3. Enclosed in vacuole, forming a phagosome;
  4. Vacuole fuses with lysosome;
  5. Lysosome contains enzymes that are emptied into the vacuole;
  6. Pathogen digested / molecules hydrolysed;
77
Q

Describe how B-lymphocytes respond when they are stimulated by antigens. (4 marks)

A

Divide by mitosis to form clones;

Produce plasma cells;

Plasma cells make antibodies;

Plasma cells produce memory cells

78
Q

An antigen in a vaccine leads to the production of antibodies. Describe the part played by B lymphocytes in this
process. (4 marks)

A

1 Macrophages present antigens to B lymphocytes;

2 antigen binds to complementary receptors on B lymphocyte;

3 lymphocyte becomes activated;

4 (B) lymphocytes reproduce by mitosis;

5 plasma cells secrete antibodies;

79
Q

What is a monoclonal antibody? (2 marks)

A

Antibodies from the same plasma cell;

Specific to/complementary to only one antigen;

80
Q

What is vaccination? (2 marks)

A

Injection of antigens from attenuated microorganism;

Stimulates the formation of memory cells;

81
Q

When a vaccine is given to a person, it leads to the production of antibodies against a disease-causing organism.
Describe how. (5 marks)

A
  1. Vaccine contains antigen from pathogen;
  2. Antigen is displayed on antigen-presenting cells (macrophages);
  3. Helper T cell with complementary receptor protein binds to antigen;
  4. Helper T cell stimulates B cell;
  5. With the complementary antibody on its surface;
  6. B cell secretes large amounts of antibody;
  7. B cell divides to form clone which produces the same antibody
82
Q

Vaccines protect people against disease. Explain how. (5 marks)

A
  1. Vaccines contain antigens from a dead/weakened pathogens are injected;
  2. Memory cells made;
  3. On second exposure memory cells produce become active and produce antibodies;
  4. Rapidly produce antibodies/ produces more antibodies;
  5. Antibodies destroy pathogens;
83
Q

Scientists use an antibody to detect an antigen on the bacterium that causes stomach ulcers. Explain why the
antibody will only detect this antigen. (3 marks)

A
  1. Antibody has a variable region with a specific amino acid sequence / primary structure;
  2. The shape of tertiary structure of the binding site;
  3. Complementary to the antigens;
  4. Forms complex between antigen and antibody;
84
Q

Describe how HIV is replicated after it has entered a human cell. (4 marks)

A

Reverse transcriptase;

Enzyme uses HIV RNA to make DNA copy;

DNA joined to host cell’s DNA/chromosome;

DNA used to make HIV RNA copies;

And HIV capsid proteins/enzymes;

Made at host ribosomes;

Assembly of new virus particles;

Budding off from membrane of host cell;

85
Q

Explain how the heart muscle and the heart valves maintain a one-way flow of blood from
the left atrium to the aorta. (5 marks)

A
  1. Atrium has higher pressure than ventricle due to filling / contraction. This causes the
    atrioventricular valves to open;
  2. Ventricle now has higher pressure than atrium (due to filling / contraction).
    This causes atrioventricular valves to close;
  3. Ventricle has higher pressure than aorta causing semilunar valve to open;
  4. This leads to a higher pressure in the aorta than the ventricle (as heart
    relaxes) causing semilunar valve to close;
  5. (Muscle / atrial / ventricular) contraction causes increase in pressure;
86
Q

Describe and explain four ways in which the structure of a capillary adapts it for the
exchange of substances between blood and the surrounding tissue (4 marks)

A
  1. Permeable capillary membrane;
  2. Single cell thick walls - reduces diffusion distance;
  3. Flattened (endothelial) cells - reduces diffusion distance;
  4. Fenestrations - allows large molecules through;
  5. Small diameter/ narrow - gives a large surface area to volume / short
    diffusion distance;
  6. Narrow lumen - reduces flow rate giving more time for diffusion;
  7. Red blood cells in contact with wall / pass singly - gives short diffusion
    distance / more time for diffusion
87
Q

Explain how tissue fluid is formed and how it may be returned to the circulatory
system. (6 marks)

A
  1. Hydrostatic pressure of blood is high at arterial end;
  2. Fluid & soluble molecules pass out;
  3. Proteins & large molecules remain behind;
  4. This lowers the water potential;
  5. Water moves back into venous end of capillary
    by osmosis;
  6. Lymph system collects any excess tissue fluid which returns to blood and
    returns this tissue fluid to the veins;
88
Q

Describe and explain how fish maintain a flow of water over their gills. (4 marks)

A
  1. mouth opens, operculum/opercular valve shuts;
  2. floor of mouth is lowered;
  3. water enters due to a decreased pressure & an
    increased volume;
  4. mouth closes, operculum/opercular valve opens;
  5. floor raised results in an increased pressure & a decreased volume;
  6. Increased pressure forces water over gills;
89
Q

Explain how the ventilation mechanism of a fish and the structure of its gills result in the
efficient uptake of oxygen from water (6 marks)

A

filaments / lamellae –> large surface area;

gill plates or secondary lamellae;

large number of capillaries –> to remove oxygen / to maintain a gradient;

thin epithelium –> short diffusion pathway;

pressure changes –> to bring in more water / to maintain gradient;

countercurrent flow (or description) –>Exchange occurs along the whole length as a concentration gradient is maintained & an equilibrium is not achieved (blood always meets water with higher oxygen concentration);

90
Q

Describe and explain how the structure of the mammalian breathing system enables
efficient uptake of oxygen into the blood. (6 marks)

A
  1. Alveoli provide a large surface area;
  2. Walls of alveoli thin to provide a short diffusion pathway;
  3. Walls of capillary are thin between the alveoli so provides a short diffusion pathway;
  4. Walls of capillaries/alveoli have flattened cells;
  5. Cell membrane permeable to gases;
  6. Many blood capillaries provide a large surface area;
  7. Intercostal muscles & diaphragm muscles used to ventilate lungs to maintain a diffusion
    gradient;
  8. Wide trachea & branching of bronchi/bronchioles for efficient flow of air;
  9. Cartilage rings used to keep airways open
91
Q

From the root, water is transported upwards through the stem. Explain how evaporation
from the leaves can cause the water to move upwards (4 marks)

A
  1. Water potential in leaf cells decreases / becomes more negative;
  2. Therefore water moves out of xylem (into surrounding tissues)
  3. by osmosis; this creates a tension on the water in xylem;
  4. which is in a continuous column as water molecules are cohesive;
  5. The cohesion is due to H bonding;
  6. The column of water doesn’t break because of adhesion with xylem walls;
92
Q

Describe the processes involved in the transport of sugars in plant stems (5 marks)

A
  1. At source sucrose is actively transported into the phloem/sieve tube;
  2. By companion cells;
  3. Lowers water potential in phloem/sieve element/tube and
    water enters by osmosis;
  4. This produces a high hydrostatic pressure;
  5. Mass flow/transport towards sink/roots/storage tissue
    occurs;
  6. At sink/roots sugars are removed/unloaded;
93
Q

Use your knowledge of the cohesion-tension theory of water movement
through a plant, to explain why the diameter of the trunk is smallest at midday (6 marks)

A
  1. Diameter of trunk is minimal at warmest/brightest time of day;
  2. Stomata are open in light → so more water loss;
  3. Water evaporates more when warm as there is more heat energy for water
    evaporation;
  4. Hydrogen-bonding between water molecules causes cohesion between
    water molecules;
  5. Adhesion occurs between water molecules and walls of the xylem vessels;
  6. The xylem is pulled inwards by faster flow of water/tension;
94
Q

Describe and explain three ways in which the leaves of xerophytic plants may be
adapted to reduce water loss (3 marks)

A

Think cuticle / wax layer waterproof –> impermeable;

Sunken stomata –>saturated layer of still air outside;

Hairy –> saturated layer of still air outside;

Leaves small / reduced to spines / needles –> reduced surface area for water loss;

Leaves roll up in dry weather –> Less surface area for water loss / stomata covered / saturated region of still air;

Reduced number of stomata –> Reduced surface area for water loss;

95
Q

Different cells in the body have different functions

The epithelial cells that line the small intestine are adapted for the absorption of glucose. Explain how. (6)

A
  1. Microvilli provide a large / increased surface area;
  2. Many mitochondria produce ATP / release or provide energy (for active transport);
  3. Carrier proteins for active transport;
  4. Channel / carrier proteins for facilitated diffusion;
  5. Co-transport of sodium (ions) and glucose or symport / carrier protein for sodium (ions)
    and glucose;
  6. Membrane-bound enzymes digest disaccharides / produce glucose;
96
Q

Describe and explain how the lungs are adapted to allow rapid exchange of oxygen between air in the
alveoli and blood in the capillaries around them. (5)

A
  1. Many alveoli / alveoli walls folded provide a large surface area;
  2. Many capillaries provide a large surface area;
  3. (So) fast diffusion;
  4. Alveoli or capillary walls / epithelium / lining are thin / short distance between alveoli
    and blood;
  5. Flattened / squamous epithelium;
    Accept: endothelial
  6. (So) short diffusion distance / pathway;
  7. (So) fast diffusion;
  8. Ventilation / circulation;
    Accept: descriptions for ventilation / circulation
  9. Maintains a diffusion / concentration gradient;
  10. (So) fast diffusion;
97
Q

Breathing out as hard as you can is called forced expiration.
Describe and explain the mechanism that causes forced expiration. (4)

A
  1. Contraction of internal intercostal muscles;
  2. Relaxation of diaphragm muscles / of external intercostal muscles;
  3. Causes decrease in volume of chest / thoracic cavity;
  4. Air pushed down pressure gradient.
98
Q

Forced expiration volume (FEV) is the volume of air a person can breathe out in1
second. Explain how an asthma attack can cause a drop in the mean FEV

A
  1. Muscle walls of bronchi / bronchioles contract;
  2. Walls of bronchi / bronchioles secrete more mucus;
  3. Diameter of airways reduced;
  4. (Therefore) flow of air reduced.
99
Q

Describe and explain how the structure of the mammalian breathing system
enables efficient uptake of oxygen into the blood.

A
  1. alveoli provide a large surface area;
  2. walls of alveoli thin to provide a short diffusion pathway;
  3. walls of capillary thin / close to alveoli provides a short diffusion pathway;
  4. walls (of capillaries / alveoli) have flattened cells;
  5. cell membrane permeable to gases;
  6. many blood capillaries provide a large surface area;
  7. intercostal / chest muscles / diaphragm muscles / to ventilate lungs / maintain a diffusion /
    concentration gradient;
  8. wide trachea / branching of bronchi / bronchioles for efficient flow of air;
  9. cartilage rings keep airways open;
    (reject moist and thin membranes)
100
Q

Explain how the ventilation mechanism of a fish and the structure of its gills result in the efficient
uptake of oxygen from water. (6)

A

(explanation must be linked to structures to gain second mark for each linked
pair)

filaments / lamellae –> large SA;

large number of capillaries; –> to remove oxygen / to maintain a gradient;

thin epithelium; –> short diffusion pathway;

pressure changes; –> to bring in more water / to maintain gradient;

countercurrent flow (or description); –> exchange / diffusion along whole length / concentration gradient maintained / equilibrium not achieved / blood always meets water with higher oxygen concentration

101
Q

Explain the movement of oxygen into the gas exchange system of an insect when it is at
rest. (3)

A
  1. Oxygen used in (aerobic) respiration;
  2. (so) oxygen (concentration) gradient (established);
    Accept description of gradient
    Ignore: ‘along gradient idea’ unless direction is made clear
    Ignore: movement through gas/water
    Reject: gradient in wrong direction
  3. (so) oxygen diffuses in; 2 and 3.
    Accept: oxygen moves down a diffusion gradient for 2 marks
102
Q

Describe how carbon dioxide in the air outside a leaf reaches mesophyll cells inside the
leaf. (3)

A
1. (Carbon dioxide enters) via stomata;
Reject stroma
2. (Stomata opened by) guard cells;
3. Diffuses through air spaces;
Allow concentration gradient. Reject along gradient unless direction made clear
4. Down diffusion gradient;
103
Q

Describe the part played by the diaphragm in causing air to enter the lungs during
breathing.(3)

A

Diaphragm (muscle) contracts;
Flattens / Increases volume of chest;
Reduced pressure allows air to enter;

104
Q

What’s the difference between alpha and beta glucose?

A

The OH group in alpha is on the same level on both sides but in beta glucose it is on opposite levels on both sides.
Alpha -H OH
Beta -OH H

105
Q

What is a condensation reaction?

A

When two monomers bond through the loss of a water molecule.

106
Q

Describe amylose

A

Long, UNbranded chain of alpha glucose
Coiled structure because of the angle of glycosidic bonds
Almost cylindrical

THEREFORE, it is good for storage

107
Q

Describe amylopectin

A

A long, branched chain of alpha glucose.
Side branches increase SA for enzymes to break down the molecule {EXOPEPTIDASE}

THEREFORE, glucose is released quickly

108
Q

Does starch affect water potential?

A

No, doesn’t cause water to enter cells by osmosis which can make cells swell

THEREFORE, it is good for storage

109
Q

How do animals store glucose?

A

Glycogen which is a polysaccharide of alpha glucose

110
Q

Difference and similarities between starch and glycogen

A

Difference=Glycogen is highly branched whereas starch has a few branches

Therefore, it releases glucose quickly

Similarities=They are both good for storage as they’re compact

111
Q

How does cellulose form?

A

When beta glucose molecules bond, they form straight cellulose chains
The cellulose chains are linked together by hydrogen bonds to form microfibrils
This provides structural support for cells

112
Q

What is the structure of a triglyceride?

A

one glycerol and three fatty acids

113
Q

Describe the fatty acid molecule

A

Has a long tail
Made of hydrocarbons
Tails are hydrophobic (repel water) —> insoluble in water

114
Q

State the structure of a fatty acid

A

Oxygen=Carbon Atom - R group
|
Hydroxyl group

A carbon attached to an oxygen,hydroxyl and a R group

115
Q

What bond forms in the triglyceride?

A
Ester bond (—O—)
Formed when the -OH hydroxyl group is replaced by an -O- alkyl group
116
Q

State the difference between saturated and unsaturated fatty acids

A

Unsaturated fatty acids have 1 or more double bonds

117
Q

What are phospholipids?

A

a lipid containing a phosphate group in its molecule found in the cell membrane

118
Q

How are phospholipids and triglycerides different

A

1 fatty acid is replaced by a phosphate group

119
Q

What part of the phospholipid hydrophilic?

A

The phosphate group

120
Q

Structure of a phospholipid

A
1 glycerol, 2 fatty acids and 1 phosphate
Phosphate forms a hydrophillic head
Fatty acids form hydrophobic tails
forms a phospholipid bilayer
basic structure of membranes
121
Q

How does the structure of triglycerides relate to its function?

A

Triglycerides = energy storage molecules

Long hydrocarbon tail containing lots of chemical energy

  • > lots of energy released when they’re broken down
  • > lipids contain 2x the energy per gram of carbohydrates

They have a hydrophobic tail

  • > They’re insoluble and don’t effect water potential or water to enter by osmosis
  • > triglycerides clump as insoluble droplets which shields themselves from water with their glycerol heads
122
Q

How does the structure of phospholipids relate to its function?

A

Phospholipids = cell membranes/bilayer
Cell membranes control the movement of substances in a cell

Hydrophilic heads
-> form double layer with their heads facing out towards the water on either side

Center of bilayer is hydrophobic

  • > water soluble substances can’t easily pass through the membrane
  • > acts as a barrier
123
Q

Describe the structure of an amino acid

has an:

A
  • amino group
  • carboxyl group
  • H atom
  • and an R group
  • all bonded to a central C atom
124
Q

How is glycine different from other amino acaids?

A

Only amino acid without a C in its R group

It has 1 H in the R group

125
Q

How are polypeptides formed?

A

the condensation of many amino acids causing the release of a water molecule and peptide bonds to form in the (di/poly)peptide chain

126
Q

How is a disulphide bridge formed?

A

When sulphur atom in one cysteine bonds to the other sulphur in the other cysteine when the 2 molecules get close.

127
Q

Name an example of a quaternary protein

A

Haemoglobin
Insulin
Collagen

128
Q

Features of an enzyme

A

Roughly spherical in shape –> tight folding of polypeptide chains
Soluble
Have a role in metabolism (can break or synthesise things)

129
Q

Features of an antibody

A

Involved in immune response
Made of 4 polypeptide chains (2 light + 2 heavy) [quaternary structure]
Have variable regions-amino acid sequence varies here

130
Q

Features of a structural protein

A

Physically strong
Parallel, long polypeptide chains that have cross links
E.g Keratin or Collagen

131
Q

Features of a transport protein using an example

A

Channel proteins
present in cell membrane
contain hydrophobic and hydrophilic amino acids- causing protein to fold up into channels
transport molecules and ions across membranes

132
Q

Enzymes act as…

A

Biological Catalysts

as they speed up chemical reactions

133
Q

What is activation energy often in the form of?

A

Heat

134
Q

What is activation energy?

A

energy needed to start a reaction

135
Q

Why are enzymes highly specific?

A

due to their tertiary structure, only one complementary substrate will fit into the active site

136
Q

What is an enzyme-substrate complex?

A

The physical interaction between enzyme and substrate… duh

137
Q

How is activation energy reduced?

A

Enzyme-substrate complexes hold substances close together, reducing repulsion which allows bonds to form more easily

Enzyme-substrate co flexes can strain bonds so substrate molecule breaks easily.

138
Q

How do enzymes help a reaction?

A

They lower the activation energy required allowing reaction to happen at a lower temperature

139
Q

Describe the lock and key model

A

The enzyme and the substrate have specific complementary geometric shapes that fit exactly into one another

140
Q

Problems with the lock and key method

A

New evidence shows enzyme-substrate complex changes the shape slightly of the enzymes

141
Q

Describe the induced fit model

A

~ Substrate collides with active site

~ The tertiary structure of the active site is able to combine with complementary substrates

~ The active site changes to fit more closely around the substrate - held in position by oppositely charged R-groups

~ Enzyme-substrate complex forms

~ Change in shape puts strain on the bonds, weakening them, so lowers the activation energy

~ Enzyme-product complex forms and the substrate no longer fits so is released

142
Q

State the factors affecting the enzyme activity

Increases the rate of reaction to a point

A

Temperature
pH
Substrate Concentration
Enzyme Concentration

143
Q

How does temperature affect enzyme activity?

A

Temperature increases enzyme activity.

More heat = more kinetic energy so molecules move faster

Makes enzymes more likely to collide with substrate molecules –> more successful collisions as energy of each collision also increases

If the temperature gets too high, the reaction stops

144
Q

How does temperature stop a reaction?

A

Rise in temperature makes enzyme molecules vibrate more

The excessive vibration breaks some bonds holding the tertiary structure

Active site changes shape so substrate no longer fits

Enzyme is denatured and can’t function as a catalyst

145
Q

How does pH affect enzyme activity?

A

Increases the rate of reaction to a point

H+ and OH- ions found in acids and alkalis can distrupt the ionic bonds and hydrogen bonds that hold the enzymes tertiary structures in place making the active site change shape

146
Q

Optimum pH values of Pepsin (an endopeptidase)

A

Pepsin = 2

Pepsin found in stomach where HCl is present

147
Q

How does enzyme concentration affect enzyme activity?

A

The increased number of enzymes, increases the chance of successful collisions

This increases the rate of reaction to a point

148
Q

What is the limiting factor for enzyme concentration?

A

Substrate concentration

There’s a point where there is no further effect of adding more enzymes if all substrates occupy an enzyme

149
Q

How does substrate concentration affect enzyme activity?

A

Increases rate of reaction to a point

Higher the substrate concentration, the faster the concentration

more substrate molecules = more successful collisions

150
Q

Function of RNA

A

transfer genetic info from DNA to ribosomes

151
Q

What do ribosomes use RNA for?

A

Read RNA to make polypeptides (proteins) in a process called translation
Ribosomes are made of RNA and proteins

152
Q

How are polynucleotides formed?

A
  • Nucleotides join by condensation reactions
  • Phosphodiester covalent bonds form [2 ester bonds and a phosphate group]
  • Phosphate group combines to OH group of pentose sugar of adjacent nucleotide
  • chain of phosphate and sugars are called a sugar-phosphate backbone
153
Q

How do 2 DNA strands form a double helix?

A

Hydrogen bonding between bases

154
Q

How many hydrogen bonds are between A and T?

A

2 bonds

155
Q

How many hydrogen bonds are between C and G?

A

3 bonds

156
Q

What do hydrogen bonds do?

A

hold the nitrogen bases together

keeps strands coiled together

157
Q

How is the double helix formed?

A

2 antiparallel polynucleotide strands twist to form double helix structure

158
Q

How does DNA replicate?

A

semi conservatively

exact daughter DNA consists half of parental DNA and half of new DNA

159
Q

Describe the process of DNA semi conservative replication

A
  • DNA Helicase breaks hydrogen bonds between bases on the 2 nucleotides causing helix to unwind forming 2 single strands
  • Each original strand acts as a template for new strand to be formed
  • Complimentary base pairing occurs where free floating DNA nucleotides are attracted to the exposed complimentary base
  • DNA polymerase catalyses a condensation reaction between the nucleotides
  • Hydrogen bonds form
  • each new DNA molecule contains one strand from the original DNA and one new strand
160
Q

Advantages of semi conservative replication

A

daughter DNA consists half of parental DNA which allows genetic continuity

161
Q

Which way does DNA polymerase move?

A

DNA moves down template strand in 3’ to 5’ direction

162
Q

How did Meselson and Stahl confirm the semiconservative mechanism of DNA replication?

A
  • 2 samples of bacteria grown:
  • in nutrient broth containing light nitrogen isotope
  • in nutrient broth containing heavy nitrogen isotope

-bacteria reproduces whilst taking nitrogen from broth to form nucleotides for new DNA. Gradually the different types on nitrogen become part of DNA

  • Sample of DNA taken from each batch and is spun in a centrifuge:
  • Heavier Nitrogen containing DNA settles lower than the light one
  • Bacteria grown in heavier nitrogen taken out of centrifuge tube and placed in light nitrogen nutrient broth only for it to replicate for 1 round
  • DNA sample is taken and spun in centrifuge

Expected observation to prove conservative replication –> original heavy DNA settles at the bottom | new lighter DNA settles at the top

Actual result that proves semi conservative mechanism –> new DNA contains strand of old and new nitrogen strands so should settle in the middle

163
Q

Structure of water

A

2 slightly positive hydrogen atoms, 1 slightly negative oxygen atom

Polar molecule
Intermolecular force = van der Waals and hydrogen bonding

164
Q

Name 4 properties of water

A

Polar
High specific latent heat of vaporisation
High specific heat capacity
Cohesive

165
Q

Name 5 functions of water

A
Transport in plants
Buffer to changes in temperature
Metabolite
Reduced water loss 
solvent