Mirco: Resp, Gastro and Infective Endocarditis Flashcards
S. Pneumonia
+ve diplococci
a-haemolytic
Rusty-coloured sputum. Usually lobar on CXR. Almost always penicillin sensitive.
30-50% CAP
H. influenzae
-ve cocco-bacilli
Smoking, COPD
15-35% CAP
More common with pre-existing lung disease.
May produce beta-lactamasde.
M. catarrhalis
-ve coccus
Smoking
S. aureus
+ve cocci in “grape-bunch clusters”
Recent Viral Infection (post influenza infection in EMQs), ± cavitation on CXR
K. pneumoniae
-ve rod
Alcoholism, Elderly, haemoptysis
Legionella pneumophila
Travel, Air Conditioning, Water towers, Hepatitis, Low sodium
Can cause multi-organ failure
Confusion, abdo pain, diarrhoea. Lymphopenia and hyponatraemia.
Dx - urinary antigens
Requires special culture: buffered charcoal yeast extract
Mycoplasma pneumonia
Common – systemic symptoms, joint pain, cold agglutinin test, erythema multiforme. Risk SJS, AIHA
Chlamydia pneumonia
Hard to diagnose
Chlamydia psittaci (psittacosis)
Birds - inhalation
Splenomegaly, rash, haemolytic anaemia
Dx by serology
Sensitive to macrolide
Bordatella pertussis
Whooping cough in unvaccinated – (often travelling community in EMQs)
Rx - Classical mild-moderate pneumonia
Penicillin e.g Amoxicillin or macrolide if pen allergic (5-7 days)
Rx - Classical moderate-severe pneumonia
Penicillin + Macrolide ( e.g Co-amoxiclav + Clarithromycin) (2-3 weeks)
Allergic: Cefuroxime AND clarithromycin.
Rx - Classical HAP
1st Line: Ciprofloxacin ± Vancomycin
2nd Line/ITU: Piptazobactam + Vancomycin (ITU pts increased risk of resistant bacteria/MRSA)
Rx - HAP - Pseudomonas
Piperacillin+tazobactam (tazocin/piptazobactam) or Ciprofloxacin ± Gentamicin
Rx - HAP - MRSA
Vancomycin
Rx - Atypical Pneumo - Chlamydia, mycoplasma
Macrolide (e.g. Clarithromycin/erythromycin)/tetracycline (e.g. doxy)
(20% CAPs)
Rx - Aspiration Pneumonia
Cefuroxime and metronidazole
Rx - CAP - Legionella
Macrolide + rifampicin
Rx - CAP - S.aureus
Flucloxacillin
Score for Pneumonia Severity
Curb-65
Confusion Urea >7 mmol/l RR >30 BP <90 systolic <60 diastolic >65 years
Score 2 = ?admit
Score 2-5 = manage as severe
Compromise to resp defences
- Poor swallow
- Abnormal ciliary function e.g. smoking, viral infection, kartagener’s
- Dilated airways - bronchiectasis
- Defects in host immunity
Resp Pathogens by age
0-1 mths- E.coli, GBS, Listeria
1-6mths- Chlamydia trachomatis, S aureus, RSV
6mths-5yrs- Mycolpasma, Influenza
16-30yrs-M pneumoniae, S pneumoniae
Bronchitis
Inflammation of medium sized airways (smaller lumen).
Mainly in smokers
S. pneumoniae
H. influenzae
M. catarrhalis
Coxiella Burnetii (Q fever)
- Common in domestic/farm animals
- Transmitted by aerosol or milk
- Dx by serology
- Sensitive to macrolides
Pneumonia failure to improve on treatment
Empyema / abscess
Proximal obstruction (tumour)
Resistant organism (incl. Tb)
Not receiving / absorbing Abx
Immunosuppression
Other diagnosis
- Lung cancer
- Cryptogenic organising pneumonia (type of idiopathic intersitial pneumonia w/fibrosis)
TB - Clues
Clues:
- Ethnicity
- Prolonged prodrome
- Fevers
- Weight loss
- Haemoptysis
TB - CXR
Classically upper lobe cavitation but can vary considerably
Ghon focus/complex
Occasionally milliary
TB - Stains
Auramine and ziehl Neelsen (counter stain with methylene blue)
Most common causes of HAP (organisms)
Staphylococcus aureus - 19%
Enterobacteriaciae - 31%
Pseudomonas spp - 17%
Pneumocystis Jirovecii
Protozoan
Ubiquitous in environment
Insidious onset
Dry cough, weight loss, SOB, malaise
CXR “bat’s wing” - bilateral ground glass shadowing
Dx Immunofluorescence on BAL (bronchoalveolar lavage)
Rx Septrin (Co-trimoxazole)
Prophylaxis Septrin
Aspergillus Fumigatus Lung Diseases
Allergic bronchopulmonary aspergillosis:
- Chronic wheeze, eosinophilia
- Bronchiectasis
Aspergilloma:
- Fungal ball often in pre-existing cavity
- May cause haemoptysis
Invasive aspergillosis:
- Immunocompromised
- Rx Amphotericin B
Immunosuppression & LRTI
HIV: PCP, TB, atypical mycobacteria
Neutropenia: fungi e.g. Aspergillus spp
Bone marrow transplant: CMV
Splenectomy: encapsulated organisms
e.g. S. pneumoniae, H. influenzae, malaria
BUT “Anything can do anything”
Antigen Tests - Pneumonia
Limited urine antigen tests available:
- S. pneumoniae
- Legionella pneumophila
Send in severe community-acquired pneumonia
Antibody Tests - Pneumonia
Only useful on paired serum samples
Usually collected on presentation and 10-14 days later
Look for rise in antibody level over time
Most useful for organisms that are difficult to culture eg:
- Chlamydia
- Legionella
The only organism (pneumonia) for which immunofluorescence is routinely used
Pneumocystisis jirovecii
May also be detected by Silver stain in cytology lab
Prevention of pneumonia
Smoking advice
Vaccination: - Childhood immunisation schedule. - Adults: Influenza annually Pneumovax every 5 years
Pulmonary TB - Sx
FLAWS
+/- cough
+/- haemoptysis
Pulmonary TB - RFs
Recent Migrant HIV Homelessness IVDU Immunosuppression Foreign travel Living closely with people
Pulmonary TB - Ix
Imaging: CXR (Upper lobe cavitation typically). CT
Culture – Sputum (x3), bronchoalveolar lavage (BAL), urine (EMU - early morning urine), pus etc in Lowenstein-Jensen medium (Gold Standard)
Sputum microscopy – ZN/auramine staining: Gram +ve rods, acid fast, aerobic, intracellular
Tuburculin skin tests (TST): Mantoux/Heaf using PPD
IGRA: interferon-γ release assays e.g. Elispot, Quantiferon - used for screening/diagnosing latent TB NOT active.
NAAT: PCR-line probe assays, tests for sensitivities (more sensitive than culture)
Other: Liquid culture mediums
TB - Vaccination
Vaccination: BCG (=Bacille Calmette-Guerin)
Attenuated strain of M. Bovis
Efficacy 0-80% – Bad for pulmonary TB. Good for leprosy, TB meningitis, disseminated TB.
Extrapulmonary TB
All the “ITIS”
Pericarditis, Lymphadenitis, Peritonitis etc
TB Meningitis
- FLAWS + Neurological change
- Diagnose with CT and LP
- Needs 1yr TB tx with Steroids (PP says 10 months?)
Pott’s Disease aka Spinal TB
FLAWS
Hematogenous spread –> initial discitis –> Vertebral destruction + collapse ± Anterior extension (causing iliopsoas abscess)
Ix – MRI/CT ± Biopsy/Aspirate
Rx – 1 year anti TB treatment
Pulmonary TB - Rx
RIPE 6 months (pp says 4?): Rifampicin - raised transaminases, induces CYP450, orange secretions Isoniazid (+pyridoxine) - peripheral neuropathy, hepatotoxicity
2 months:
Pyrazinamide - hepatotoxicity
Ethambutol - visual disturbance (check colour visitant every review)
+ vit D, nutrition, surgery
M. Leprae & M. Lepromatosis
SNEB
Skin: Depigmentation, macules, plaques, nodules, ulcers
Nerves: Thickened nerves, sensory neuropathy
Eyes: Keratitis, Iridocyclitis
Bone: Periositis, aseptic necrosis
M. Avium (part of M avium complex with M. intracellulare)
Children – Pharyngitis/cervical adenitis
Pulmonary – Underlying lung disease (resembles TB)
Disseminated – Lymphoma etc
AIDS – Disseminated infection, Mycobacteraemia (consider in HIV pts with longstanding diarrhoea)
M. Marinarum
- Single or clusters of papules/plaques –> granulomas
- Swimming pool/aquarium owners
M. Ulcerans
- Insect Transmission / Bite
- Early – painless nodule
- Usually slowly progressive leading to ulceration, scarring + contractures –> Bairnsdale ulcer, Buruli ulcer
- Seldom fatal, hideous deformity
MTB complex includes
M. tuberculosis
M. bovis