Midterm #2 Review Flashcards

1
Q

gram positive, spore forming rods

A
  • Bacillus anthracis
  • Bacillus cereus
  • Clostridium tetani
  • Clostridium botulinum
  • Clostridium perfringens
  • Clostridium difficile
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

gram positive, spore forming, aerobic

A
  • Bacillus anthracis
  • Bacillus cereus
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

gram positive, spore forming, anaerobic

A
  • Clostridium tetani
  • Clostridium botulinum
  • Clostridium perfringens
  • Clostridium difficile
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

gram positive, non-spore forming

A
  • Listeria monocytogenes
  • Corynebacterium diptheriae
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

gram negative bacilli

A
  • Salmonellae
  • Shigellae
  • Escherichia coli
  • Cronobacter spp.
  • Vibrio and Campylobacter
  • Pseudomonas
  • Legionella
  • Helicobacteraceae
  • Alcaligenaceae
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q
  • gram positive
  • spore forming
  • aerobic
  • causative agent of anthrax
  • unique protein capsule; antiphagocytic
  • exotoxin composed of 3 proteins
A

Bacillus anthracis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q
  • gram positive
  • spore forming
  • aerobic
  • motile
  • non-encapsulated
  • resistant to penicillin
  • causes food poisoning
A

Bacillus cereus

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q
  • gram positive
  • spore forming
  • anaerobic
  • produces lethal neurotoxin that causes rapidly fatal food poisoning
  • neurotoxin blocks release of Ach in ANS
  • causes botulism
A

Clostridium botulinum

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q
  • gram positive
  • spore forming
  • anaerobic
  • exotoxin is called tetanospasmin
  • causes tetanus
  • spores found in soil and animal feces
A

Clostridium tetani

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q
  • gram positive
  • spore forming
  • anaerobic
  • causative agent of gas gangrene
  • 2 classes of infection: cellulitis/wound infection and clostridial myonecrosis
A

Clostridium perfingens

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q
  • gram positive
  • spore forming
  • anaerobic
  • responsible for antibiotic-associated pseudomembranous enterocolitis
  • infects the colon
  • releases exotoxins
  • exotoxin A: causes diarrhea
  • exotoxin B: is cytotoxic to colonic cells
A

Clostridium difficile

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q
  • gram positive
  • non-spore forming
  • can cross 3 protective barriers
  • psychrophile
  • causes disease known as listeriosis in high risk individuals
A

Listeria monocytogenes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q
  • gram positive
  • non-spore forming
  • pathogen responsible for diptheria
  • colonizes the pharynx, forming grayish pseudomembrane composed of fibrin, leukocytes, necrotic epithelial cells, and its own cells
A

Corynebacterium diptheriae

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q
  • gram negative
  • lactose non-fermenters
  • motile
  • causes enterocolitis and enteric fever
A

Salmonellae

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q
  • min dose of 10^5 required for symptoms to occur
  • short incubation period (6-48hrs, usually 8-12hrs)
  • caused by many serotypes of S. enterica
A

Enterocolitis (Gastroenteritis): key features

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

clinical:
- nausea, vomiting, profuse diarrhea
- fever, chills, headache, myalgia
- recovery within 2-3 days
- septicemia; rare complication in susceptible hosts
diagnosis:
- stool culture

A

Enterocolitis (Gastroenteritis): clinical and diagnosis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

epidemiology:
- infection by ingestion of contaminated food or drink
- animal products and animals are major sources
- person-to-person spread may occur
treatment:
- antimicrobials not recommended

A

Enterocolitis (Gastroenteritis): epidemiology and treatment

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q
  • S. enterica serovar Typhi causes typhoid fever
  • S. enterica serovar Paratyphi causes paratyphoid fever
  • generalized infection
  • multiplication in lymphoid tissue
  • mortality is about 10% if left untreated
  • survivors usually become convalescent carriers or chronic carriers
A

Enteric fever (typhoid and paratyphoid): key features

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

convalescent carrier

A

excreting bacteria for up to 3 months

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

chronic carrier

A

excreting bacteria for 6 months or occasionally life long

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Enteric fever (typhoid and paratyphoid): diagnosis and epidemiology

A

diagnosis:
- isolation of organism from blood (1st week)
- isolation of organism from stool and urine (2nd-3rd week)
epidemiology:
- human carriers are only known reservoir
- infective dose is about 10^6
- major vehicles are sewage contaminated drinking water, shellfish, contaminated milk/milk products
- chronic carriers maintain endemic typhoid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Enteric fever (typhoid and paratyphoid): prevention

A
  • sanitary disposal of human faeces
  • scrupulous cleanliness while handling food
  • purification and chlorination of water supplies
  • vaccines are available but are of low efficacy
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

Escherichia coli (E. coli)

A
  • gram negative bacilli
  • lactose fermenters
  • most numerous aerobic species of the normal human intestinal flora
  • most frequent cause of UTIs
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q
  • type of E. coli
  • major cause of infant diarrhea in developing countries
  • frequent cause of traveller’s diarrhea
  • enterotoxins
A

Enterotoxigenic E. coli

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Q
  • type of E. coli
  • bloody diarrhea and dysentery similar to Shigella species
A

Enteroinvasive E. coli

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
26
Q
  • type of E. coli
  • can cause severe diarrhea in infants, especially in developing countries
A

Enteropathogenic E. coli

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
27
Q
  • type of E. coli
  • haemorrhagic collitis
  • hamburger disease
  • proper handling of food, safe preparation, and proper cooking practices are essential to prevent illness
A

E. coli O157:H7

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
28
Q
  • may colonize and infect hospitalized patients
  • causes wound infections, bacteremia, and hospital acquired pneumonia
  • may be naturally resistant to antibiotics
  • Cronobacter Sakazakii linked to outbreaks of contaminated powdered infant formula
A

Cronobacter spp.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
29
Q
  • gram negative bacterium
  • produces an enterotoxin (cholera toxin)
  • causes cholera: acute gastrointestinal illness
  • profuse watery diarrhea (10-15 litres per day), cramps and vomiting
  • enterotoxin binds cells in small intestine, cells secrete chlorides, Na+ absorption decreases, water accumulates in gut –> watery diarrhea
  • can lead to severe dehydration and death if left untreated
  • mainly water-borne
A

Vibrio cholerae

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
30
Q

Campylobacter

A
  • C. jejuni and C. coli
  • major cause of human enteritis
  • symptoms: fever, abdominal pain, bloody diarrhea
  • maybe one cause of traveller’s diarrhea
  • normal flora in birds and domestic animals
  • some strains invasive, others toxigenic
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
31
Q
  • opportunistic pathogen
  • found in many moist habitats and water
  • source of infection can be humidifiers, etc.
  • treatment is difficult because all pseudomonas are resistant to many antibiotics
A

Pseudomonas

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
32
Q
  • type of pseudomonas
  • respiratory pathogen in cystic fibrosis patients
  • infections in lesions of burn patients
A

Pseudomonas aeruginosa

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
33
Q
  • type of pseudomonas
  • common contaminant of saline solutions and water
  • able to multiply in low nutrient environment
  • respiratory pathogen in cystic fibrosis patients
A

Pseudomonas cepacia

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
34
Q

Haemophilus influenzae: key features and treatment

A
  • part of normal nasopharyngeal flora in many adults and children
  • causes invasive infection of young children
  • meningitis, pneumonia, joint infections
  • treatment: development of vaccine has decreased the number of cases in Canada
  • can cause increased bronchial inflammation in patients already having chronic bronchitis
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
35
Q
  • microaerophillic, spiral bacilli
  • most common cause of stomach ulcers
  • urease: protection from low pH
  • triple therapy treatment: antibiotics and H+ pump inhibitors
A

Helicobacter pylori

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
36
Q

Bordetella pertussis and its 4 virulence factors

A
  • whooping cough (violent cough)
  • 4 virulence factors:
    1. pertussis toxin (A-B)
    2. extra cytoplasmic adenylate cyclase (weakens host defense)
    3. filamentous heamgglutinin (bronchial attachment and exotoxin release)
    4. tracheal cytotoxin (destroys ciliated cells –> poor clearance of mucous and bacteria)
  • prevention: vaccination with heat-killed organism
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
37
Q
  • causes legionnaires disease
  • opportunistic pathogen
  • may cause severe pneumonia
  • grows in water and is found in shower heads, water tanks, air cooling/heating tanks
  • exposure is by aerosol and there is no person-to-person transmission
A

Legionella pneumophila

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
38
Q
  • no cell invasion - bacteria bind to intestinal epithelial cells but do not enter the cell
  • diarrhea caused by release of exotoxins (enterotoxins in the GI tract)
  • enterotoxins cause electrolyte and fluid loss
  • watery diarrhea with systemic symptoms (fever) - example includes Vibrio cholera
A

diarrhea - with or without systemic invasion

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
39
Q
  • factors allow binding and invasion of cell
  • toxins released destroy the cells
  • systemic immune response (fever)
  • cell death results in blood stools
  • examples include E. coli O157:H7
A

diarrhea with invasion of intestinal epithelial cells

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
40
Q
  • abdominal pain and diarrhea containing red and white cells
  • fever, headache, and increased white cell counts
  • examples include Salmonella enterica serovar Typhi, Yersinia entercolitica, Campylobacter jejuni
A

diarrhea with invasion of lymph nodes and bloodstream

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
41
Q

biochemical classification of gram negative bacteria

A
  • ability to ferment lactose to gas and acid
  • production of H2S
  • ability to hydrolyze urea
  • ability to liquify gelatin
  • ability to decarboxylate specific amino acids
  • growth media (EMB and MacConkey)
  • classified based of surface structure
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
42
Q

classification of gram negative bacteria: ability to ferment lactose to gas and acid

A

E. coli and most enterobacteriaceae ferment lactose while Salmonella, Shigella, and Pseudomonas do not

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
43
Q

Eosine-methylene-blue (EMB)

A
  • methylene blue inhibits gram positive
  • lactose fermenters are deep purple to black
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
44
Q

MacConkey

A
  • bile salts inhibit gram positive
  • lactose fermenters develop pink-purple colouration
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
45
Q

3 major surface antigens of the enterics

A

O antigen
- most external component of LPS
- differs from enteric to enteric
K antigen
- this is a capsule that covers the O antigen
H antigen
- is part of the subunits of the bacterial flagella (only motile bacteria with have H antigen)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
46
Q

mycobacteria

A
  • group of bacteria including the causative agents of tuberculosis and leprosy
  • high content of lipids (waxes)
  • waxy coat renders bacteria resistant to disinfectants and interferes with gram stain
  • mycobacteria are acid fast and resist decolourization
  • use Ziehl-Neelsen staining technique (acid-fast technique)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
47
Q

Ziehl-Neelsen staining technique

A
  1. Ziehl-Neelsen carbol fuchsin to the slide for 5 minutes while applying heat
  2. follow with a gently wash with water to cool the slide
  3. acid alcohol is now added to decolourize the slide
  4. wash the slide in water again and counterstain with methylene blue for 1-2 minutes
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
48
Q
  • chronic slow-progressing pulmonary infection
  • transmission by aerosol droplets
  • obligate aerobe, facultative intracellular parasite
  • 4-6 weeks to see colonies on a plate
  • Lowenstein-Jensen medium
  • use microscopy of sputum smears as first line of diagnosis
  • infection develops in stages
A

Mycobacterium tuberculosis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
49
Q

primary tuberculosis

A
  1. aerosol inhalation
  2. bacteria multiplication in alveoli
  3. macrophage ingestion of bacilli and formation of 1* complex
  4. foci of infection in lungs (may be spread to kidneys, bones, meninges)
    ~ 6 weeks ~
  5. CMI is fully active, infection is stopped (majority of cases)
  6. some bacilli survive, reactivation several years later
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
50
Q

post-primary tuberculosis

A
  • late reactivation of lesions in lungs, kidneys, bones, etc
  • 5% of cases, higher in patients with AIDS
  • chronic infection
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
51
Q

immunity in tuberculosis

A
  • cell-mediated immunity is most important (T-cells)
  • mantoux test is done to test immunity
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
52
Q

mantoux test

A
  • tuberculin solution is injected intradermally
  • wait 48-72 hours
  • check for induration
  • record diameter of induration
    >10mm: positive
    5-9mm: doubtful, maybe cross reaction with other mycobacteria
    <4mm: negative
  • a positive test does not necessarily mean there is currently an active infection
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
53
Q

atypical mycobacteria

A
  • occasionally isolated from patients with chronic pulmonary disease
  • M. kansassi, M. avium, M. intracellulare
  • indisguishable from TB
  • higher resistance to anti-TB drugs
  • give ‘doubtful’ mantoux test (5-9mm)
  • M. marinum
  • M. fortuitum
  • all these infection are most typically seen in the immunocompromised
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
54
Q

M. marinum

A

skin infections

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
55
Q

M. fortuitum

A

soft tissue abscesses

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
56
Q

mycobacterium leprae

A
  • causes leprosy
  • 2 kinds: tuberculoid leprosy and lepromatous leprocy
  • rarely found in developed countries
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
57
Q
  • visible nerve enlargment
  • few erythmatous plaques
  • few bacilli in infected tissues
  • many lymphocytes and granulomas in infection tissues
  • low infectivity
A

tuberculoid leprosy

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
58
Q
  • no visible nerve enlargment
  • many erythromatous nodules
  • many bacilli in infected tissue
  • high infectivity
A

lepromatous leprosy

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
59
Q

spirochetes

A
  • spiral shape pathogens
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
60
Q

treponema pallidum

A
  • causes syphilis
  • non-gram stainable, helical bacteria
  • unculturable in vivo
  • use dark field microscopy
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
61
Q

primary syphilis

A
  • appearance of chancre 3-4 weeks after infection
  • fluid from lesion contains bacteria -> seen under dark field microscopy
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
62
Q

secondary syphilis

A
  • 6 weeks after appearance of chancre
  • generalized or local rash
  • mucosal lesions with many treponemes
  • spontaneous remission may occur after 1 or 2 phase
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
63
Q
  • no symptoms of infection
  • non-transmittable after 4 years
  • congenital infection may occur
    which phase of syphilis?
A

latent syphilis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
64
Q
  • obliterative endarteritis
  • can involve skin, mucosae, nervous system, cardiovascular system and tissues
  • very rare
  • can cause lethal symptoms
    which type of syphilis?
A

late syphilis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
65
Q

serology testing for syphilis

A

2 step serology test:
non-treponemal tests (VDRL, RPR, Wassermann)
- non-specific: use cardiolipin as antigen
- screening
- positive in early stages
treponemal tests
- specific: use treponemal extracts
- FTA-ABS: fluorescent treponemal antibody absorption
- MHA-TP: microhemagglutination of T. pallidum
- used to confirm positive VDRL

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
66
Q
  • lyme disease
  • tick bites
  • affects skin, joints, nervous system, and heart
  • common in US, rare in Canada
  • use serology for diagnosis (ELISA)
  • organism is very difficult to see under microscope
  • difficult to culture
  • serology does not give positive result in first 2-4 weeks of infection
A

borrelia burgdorferi

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
67
Q

lyme disease: treatment

A
  • doxycycline, amoxicillin, cefuroxime for early disease
  • for neurological and musculoskeletal manifestations, undergo prolonged treatment
68
Q

lyme disease: prevention

A
  • avoid ticks and wear protective clothing in woods (long sleeves and pants)
  • vaccine available: ospA antigen of organism
69
Q
  • obligate intracellular energy parasites; cocci
  • can not make their own ATP or other energy intermediates
  • can not be grown on artificial media
  • life cycle has 2 forms: elementary body and reticulate body
A

chlamydiae

70
Q

elementary body (chlamydiae)

A
  • 300-400 nm
  • infectious form
  • no growth or replication
71
Q

reticulate body (chlamydiae)

A
  • 800-1000 nm
  • replication and growth
72
Q
  • STD chlamydia
  • most commmon STD in Canada and US
  • males: urethritis
  • females: cervicitis
  • many patients are asymptomatic and untreated due to limited diagnostic tools
  • untreated male: prostatitis, epididymitis
  • untreated female: PID, tubal infertility, ectopic pregnancy, chronic pelvic pain
  • 2 biovars: trachoma and LGV
  • Trachoma: 15 serovars
  • LGV: 4 serovars
A

chlamydia trachomatis

73
Q

other infections caused by C. trachomatis

A
  • trachoma: chronic ocular infection; leading cause of blindness in middle east, north africa, and south east asia
  • conjunctivitis in newborns –> perinatal transmission
  • lymphogranuloma venereum: STD from some serotypes of C. trachomatis; endemic in tropical and subtropical countries
74
Q

Chlamydia pneumoniae

A
  • respiratory tract infections, mild pneumonia
  • usually sub-clinical infections
75
Q

Chlamydia psittaci

A
  • bird pathogen
  • can transmit to humans
  • pneumonia or endocarditis
76
Q

mycoplasma

A
  • smallest free-living bacterium (100-300nm)
  • saprophytes, part of normal flora of oropharynx and genital tract of humans and animals
  • lack true cell wall
  • some species are pathogenic
77
Q

mycoplasma pneumoniae

A
  • primary cause of atypical pneumonia
  • more common in younger individuals (15-35 years)
  • rarely complications lead to meningoencephalitis, myocarditis
  • diagnosis is usually clinical, no lab confirmation
  • treatment: erythromycin or tetracycline
78
Q

genital mycoplasma

A
  • Mycoplasma hominis
  • Ureaplasma urealyticum
  • part of normal genital flora
  • rate of colonization increases with number of sexual partners
  • may cause urethritis, epididymitis, pelvic inflammatory disease and postpartum fever
79
Q

fungi

A
  • eukaryotic
  • lack chlorophyll
  • cannot generate energy through photosynthesis
  • aerobic
80
Q

dimorphic fungi

A

fungi that grow as either yeast or mold (depends on temperature, environmental conditions, etc)

81
Q

hyphae

A

threadlike, branching tubules composed of fungal cells attached end to end

82
Q

molds (mycelia)

A

multicellular colonies composed of clumps of intertwined and branching hyphae

83
Q

saprophytes

A

fungi that live and use organic matter such as soil, rotten vegetation as the energy source

84
Q

spores

A

reproducing bodies of molds

85
Q

yeast

A
  • unicellular growth form of fungi
  • can appear spherical to ellipsoidal
  • reproduce by budding (if they do not separate, they form long chains of yeast cells known as pseudohyphae)
86
Q

levels (depth) of infection by fungal pathogens

A

[skin]-superficial-cutaneous-subcutaneous-systemic-[bloodstream]

87
Q
  • pityriasis versicolour (multicoloured) caused by Malassezia furfur - hypo or hyperpigmented patches that remain white if you suntan
  • tinea nigra (black coloured) caused by Exophiala werneckii - painless patches on soles of hands and feet
  • pigment change of skin
  • treatment: spreading dandruff shampoo containing selenium sulfide over skin
A

superficial fungal infections

88
Q

common ones include microsporum, trichophyton, and epidermophyton
- Tinea corporis (body)
- Tinea curis (groin)
- Tinea pedis (feet)
- Tinea capatis (scalp)
- Tinea unguium (onychomyosis)
treatment usually topical imidazoles (keep skin dry)
- Candida albicans (mouth, groin, and vagina)

A

cutaneous fungal infections (skin, hair, nails)

89
Q

dermatophytic fungi

A
  • live in dead, horny layers of skin, hair, and nails
  • secrete enzyme keratinase (digests keratin), thereby resulting in scaling of skin, loss of hair, and crumbling of nails
90
Q

dermatophytosis

A

infections of the hair, skin, and nail

91
Q

Tinea corporis

A
  • body
  • ringworm
  • looks like ring-shaped worm under skin
92
Q

Tinea cruris

A
  • groin
  • jock itch
  • itchy red patches on groin and scrotum
93
Q

Tinea pedis

A
  • feet
  • athlete’s foot
  • commonly begins between toes
94
Q

Tinea capitis

A
  • scalp
  • primarily in children, seen as scaly, red lesions with loss of hair
95
Q

Tinea unguium

A
  • onychomyosis
  • nails are thickened, discoloured and brittle
96
Q

Candida albicans

A
  • can infect the mouth (oral thrush), groin (diaper rash), and vagina (vaginitis)
97
Q

subcutaneous infections

A
  • Sporothrix schenkii
  • Phialaphora and Cladosporium
98
Q

Sporothrix schenkii

A
  • causes sporotrichosis, an occupational hazard for gardeners
  • subcutaneous nodule appears and becomes necrotic and ulcerative
  • ulcer may heal but new nodules will arise nearby and along the lymphatic tracts of the arm
  • treatment with potassium iodide or amphotericin B
99
Q

Phialaphora and Cladosporium

A
  • cause chromoblastomycosis
  • found on rotting wood, infection follows puncture wound
  • violet-coloured wart like lesions (cluster of lesions resemble cauliflower)
  • treatment with intraconazole and local excision
100
Q

systemic fungal infection

A
  • 3 fungi that cause systemic disease in humans are: Histoplasma capsulatum, Blastomyces dermatitis, and Coccidioides immitis
  • Cryptococcus
101
Q

Histoplasma capsulatum, Blastomyces dermatitis, and Coccidioides immitis

A
  • similar mechanisms of disease
  • acquired by inhalation (inhaled as spores) but are not transmitted person to person like TB
  • local infection in lung, then bloodstream dissemination
  • 3 clinical presentations:
    • asymptomatic
    • pneumonia
    • disseminated
102
Q

Cryptococcus neoformans

A
  • polysaccharide encapsulated yeast
  • inhaled in lungs
  • usually asymptomatic
  • major manifestation in meningoencaphalitis
  • most cases occur in immunocompromised persons (~10% of AIDs patients develop Cryptococcus)
  • treatment with amphotericin B and flucytosine
  • treatment may last for 6 months (AIDs patients may need for life)
103
Q

Aspergillus flavus

A
  • spores of this mold are everywhere
  • some develop type 1 hypersensitivity reaction (IgE-mediated)
  • persons with lung cavitations from TB or malignancies can get aspergillus fungal ball (aspergilloma) in cavity
  • immunocompromised person can develop invasive pneumonias and disseminated diseases
  • A. flavus and other fungi produce toxins called mycotoxins
  • A. flavus produces aflatoxin (contamination of grains, peanuts, rice)
104
Q

parasitism

A
  • intimate and obligatory symbiotic relationship between 2 organisms of different species
  • short term (mosquito) or permanent (tapeworm)
  • very common
105
Q

parasite

A
  • metabolically and physiologically dependent on host
  • ‘true parasites’ include protozoans (single celled), helminths (worms), and arthropods (ectoparasites)
106
Q

‘success’ of parasites is defined in terms of:

A
  • prevalence in hosts
  • number of host species available
  • geographic range
  • number of offspring
  • available routs of transmission
107
Q

Giardia lamblia

A
  • most frequently identified intestinal parasite worldwide
  • protozoan
  • can cause acute giardiasis
108
Q

G. lamblia: symptoms

A
  • most infections are asymptomatic (carreirs)
  • retardation of growth and development in young children (failure to thrive)
    acute giardiasis:
  • diarrhea
  • weight loss
  • abdominal discomfort
  • nausea
  • vomiting
109
Q

G. lamblia: prevalence

A
  • most common infection of intestinal tract worldwide
  • 2-5% in industrialized world
  • 20-30% in developing world
  • prevalence rises through infancy and childhood and declines in adolescence (related to faecal-oral route of transmission)
  • other high-risk groups include travellers and immunocompromised
110
Q

protozoan life cycle

A
  • multiply using a form of life cycle that is consisting of 2 important components
    1. cyst
    2. trophozoites
111
Q

cyst form: protozoan life cycle

A
  • similar to bacterial spores
  • protect cell
  • do not multiply
  • form that is found in the environment and is infectious
  • will try to get into a host
112
Q

trophozoite form: protozoan life cycle

A
  • once cyst makes enters a host, turns to trophozoite form
  • trophozoite form multiplies inside host
113
Q

G. lamblia: diagnosis

A

microscopy (stool exam)
- look for cysts
- cysts concentrated by flotation and identified using bright-field microscopy
- immunofluorescence microscopy using fluorochrome-conjugated mAb’s that bind to cyst wall
immunological testing
- detection of Giardia-specific antigens in faeces

114
Q

is G. lamblia treatable?

A

yes

115
Q

parasites and drug resistance

A

just like bacteria, parasites can develop drug resistance as well

116
Q

G. lamblia: prevention

A
  • water filtration
  • cysts resistant to chlorination
  • ozone/UV light promising
  • EPA method 1623
  • public health education
117
Q

Trichomonas vaginalis

A
  • possibly the most common STD worldwide (200 million cases)
  • transmitted through mucous membrane contact (no resistant cyst stage)
118
Q

Trichomonas vaginalis: symptoms

A
  • 40-50% asymptomatic carriage
  • vaginitis (trichomoniasis) with itching, foul-smelling, sometimes frothy discharge
  • may increase susceptibility to cervical cancer and HIV infection
  • infection during pregnancy may result in premature delivery and low birth weight
  • males usually asymptomatic; occasionally urethritis, prostatitis
119
Q

Trichonomas vaginalis: diagnosis

A
  • microscopy (wet mounds) to identify trichonomads in vaginal or urethral discharge
120
Q

Trichonomas vaginalis: treatment

A
  • treated with drugs
  • to avoid re-infection, testing and treatment of partners is important
121
Q

Toxoplasma gondii

A
  • recognized as a human pathogen in early 1900’s
  • very common worldwide
  • large number of mammals and birds act as intermediate hosts
  • cats are the only definitive hosts
122
Q

intermediates hosts

A
  • although parasites can infect these animals, they do not shed cysts
  • cannot pass on cysts through faecal material to contaminate food or any other environmental material
123
Q

Toxoplasma gondii: transmission

A
  1. ingestion of sporulated oocysts
    - contaminated soil/sand
    - contaminated fruits and veggies’- waterborne outbreaks
  2. ingestion of tissue cysts
    - consumption of raw or poorly cooked meat
  3. congenital infection of fetus- infection acquired during pregnancy (most severe if acquired in first trimester
124
Q

symptoms of toxoplasmosis

A
  1. immunocompetent host
    - 90% asymptomatic
    - lymphadenopathy
    - headaches
    - muscle aches
    - fever
    - malaise
  2. immunocompromised host
    - encephalitis
    - myocarditis
    - pneumonia
  3. congenital infection
    - hepatosplenomegaly
    - mental retardation
    - retinochoroiditis
    - hydrocephalus
125
Q

treatment of toxoplasmosis

A
  • diagnosis based on serological assays
  • immunocompetent patients normally don’t require treatment unless symptoms become severe or chronic
  • immunocompromised patients require prompt treatment with a combination of pyrimethamine and sulfadiazine
  • congenital infections:
    • mother/fetus can be treated to reduce incidence and severity of fetal infection
    • infected newborns can also be treated to minimize sequelae
126
Q

malaria: transmission

A
  • anopheline mosquitoes (vectors)
  • blood transfusion/shared needles
  • congenital infection
  • ‘airport’ malaria
127
Q

malaria: symptoms

A
  • spiking fever and chills
  • flu-like symptoms (myalgias, headaches, abdominal pain, malaise)
  • severe symptoms (seizures, coma, renal failure, respiratory failure)
128
Q

Malaria prophylaxis: treatment

A
  • anti-parasitic drugs used for treatment and prevention
  • drug resistance is a serious problem
129
Q

malaria: control/prevention

A
  • eradication or control of mosquitoes (resistant to insecticides)
  • protection against mosquito bites:
    • avoid rural areas at night
    • long-sleeved shirts/long pants
    • insect repellant
    • bed netting
130
Q

Cryptosporidium spp.

A
  • recognized as human pathogen (1976)
  • reported in humans worldwide
  • causes cryptosporidiosis
  • most common symptoms of cryptosporidiosis is watery diarrhea; other symptoms include dehydration, weight loss, abdominal pain, fever, nausea, vomiting
  • chronic, debilitating, and potentially life-threatening symptoms in immunocompromised
131
Q

cryptosporidiosis: symptoms and treatment

A
  • most common symptoms of cryptosporidiosis is watery diarrhea; other symptoms include dehydration, weight loss, abdominal pain, fever, nausea, vomiting
  • chronic, debilitating, and potentially life-threatening symptoms in immunocompromised
  • no drug treatment available
132
Q

Cryptosporidium: transmission

A

water
- numerically the most important mode of transmission (contaminated drinking water)
- recently numerous outbreaks associated with water parks/pools

133
Q

C. parvum: transmission

A

person-to-person
- ingestion of oocysts due to poor hygiene (e.g. day care)
autoinfection
- thin-walled oocysts are released into the lumen and cause autoinfection
- responsible for chronic and life-threatening disease in immunocompromised
zoonotic
- cattle serve as important reservoir hosts
- calves with diarrhea can excrete up to 10^10 oocysts/day
- environmental contamination; veterinary personnel and animal handlers at increased risk (petting zoo visitors)

134
Q

C. parvum: diagnosis

A

microscopy
- oocysts shedding intermittent; multiple stools examined
- concentration methods can be used when low oocyst shedding
- wet mounts or permanent stains are used (acid-fast)
- fluorescein-labelled IgG mAb is used in immunofluorescense microscopy

135
Q

C. parvum: control/prevention

A
  • watershed management
  • flocculation/sand filtration
  • resistance to chlorination
  • ozone, UV light
  • water testing (EPA method 1623)
  • public health education
136
Q

Cyclospora cayetanensis

A
  • identified as a coccidian protozoan parasite and named in 1993
  • pretty widespread
  • endemic countries include: Nepal, Haiti, Peru, and Guatemala
  • cause cyclosporiasis
137
Q

cyclosporiasis: symptoms and treatment

A
  • low infectious dose
  • incubation period approx. 1 week
    symptoms:
  • profuse and prolonged diarrhea
  • abdominal pain
  • nausea
  • vomiting
  • fatigue
  • fever
  • loss of appetite
    treatment
  • effectively treated with bactrim
138
Q

cyclosporiasis: diagnosis

A
  • microscopic examination of wet mount stool for oocysts
  • staining methods
  • many microscopic and staining methods used to diagnose
139
Q

cyclosporiasis: transmission

A
  • person-to-person transmission unlikely
  • zoonotic transmission unlikely
  • most earlier outbreaks were waterborne
    numerous foodborne outbreaks in recent years
  • 90-99% of cases in US are foodborne
  • contamination of food
    • direct contamination
    • indirect contamination
140
Q

direct contamination

A
  • infected pickers, sorters, inspectors, or other food handlers (poor hygiene, sporulation)
141
Q

indirect contamination

A
  • contaminated water used for irrigation, mixing pesticides, washing equipment, washing hands
142
Q

eneterobius vermicularis (pinworm)

A
  • very common worldwide
  • highest incidence in school-age children
  • up to 50% of children in north america
  • more of a nuisance than a health problem
  • eggs ingested (faecal-oral route)
  • very mild symptoms
143
Q

pinworm: symptoms

A
  • mild infection of caecum/colon
  • may cause itching (pruritus ani) leading to disturbed sleep, irritability
  • scratching may cause secondary infections
144
Q

pinworm: diagnosis/treatment

A
  • scotch-tape test of perianal area
  • microscopic identification of eggs; adult female worms may also be present on the tape
  • drug of choice is pyrantel pamote
145
Q

pinworm: control/prevention

A
  • personal hygiene education for children (wash hands)
  • discourage scratching, nail biting
  • frequent bathing; regular change of underclothing, pajamas, and bedding
146
Q

Trichinella spp.

A
  • very commonly found worldwide
  • small roundworm found worldwide in many carnivorous and omnivorous animals, including humans
  • transmitted through ingestion of larvae in raw or poorly cooked meat
  • survives as an adult in small intestine; as larvae encysted in striated muscle
147
Q

Trichinella spiralis

A
  • domestic form
  • humans, swine, rats (responsible for endemicity)
  • horses (probably fed animal products as supplement)
148
Q

Trichinella nativa

A
  • sylvatic or wild form
  • humans, bears, wild boar, wolf, fox, walrus, etc
149
Q

Trichinellosis: symptoms

A
  • symptoms dependent on phase of life cycle
  • when larvae excyst (grow into worms) in small intestine: diarrhea, abdominal pain, comting
  • when next generation of larvae migrate into muscle tissues: facial edema, conjunctivitis, fever, myalgias
  • occasional life-threatening manifestation include myocarditis, CNS involvement, and pneumonitis
150
Q

Trichinellosis: treatment

A
  • different options of drugs based on phase of life cycle
  • steroids may be used to reduce inflammation
151
Q

trichinellosis: control/prevention

A
  • rodent control
  • avoid garbage feeding to livestock
  • inspection programs
  • cooking/freezing (making sure meat is cooked well)
152
Q

Diphyllobothrium spp.

A
  • broad fish tapeworm
  • large tapeworm
  • adult tapeworm inhabits the small intestine of humans and other fish-eating mammals
  • larval stages in freshwater fishes which act as intermediate hosts
153
Q

Diphyllobothrium spp.: transmission

A
  • transmitted through the consumption of raw or poorly cooked freshwater fish containing infective larvae
154
Q

Diphyllobothrium spp.: symptoms

A
  • most cases are asymptomatic
  • abdominal pain, dizziness, fatigue, vomting, diarrhea/constipation
  • vitamin B12 deficiency with pernicious anemia
155
Q

Diphyllobothrium spp.: diagnosis and treatment

A
  • stool examination for eggs (microscopy) or proglottids (segments)
  • proglottids can sometimes be fund in stool sample
  • anthelmintic drugs effective
156
Q

Taenia spp.

A
  • large tapeworms (up to 20 m in length)
  • adult stage inly found in humans
157
Q

Taenia spp.: transmission

A

transmitted through ingestion of larvae in raw or poorly cooked meat

158
Q

Taenia saginata

A

beef tapeworm

159
Q

Taenia solium

A

pork tapeworm

160
Q

Taenia spp.: symptoms, diagnosis, and treatment

A

symptoms
- mild abdominal complaints
diagnosis
- eggs or proglottids in stool
- serological techniques
treatment
- anthelmintic drugs
- surgery

161
Q

T. solium neurocysticerosis

A
  • infection with larval stage following ingestion of T. solium eggs (humans act as the intermediate host)
  • larvae migrate and develop in brain
  • intracranial hypertension, hydrocephalus, convulsive seizures
162
Q

Taenia spp.: control/prevention

A
  • both species are rare in Canada
  • routine inspections
  • cooking meat readily kills larvae
  • in endemic countries: sanitation, prevent access of pigs to human faeces
163
Q

Schistosoma spp.

A
  • blood flukes
  • worldwide (200-300 million cases)
  • free-swimming larvae in fresh water penetrate skin and develop in blood vessels surrounding intestine or bladder
  • 3 main species: S. haematobium, S. japonicum, and S. mansoni
  • transmission by skin penetration
164
Q

schitosomiasis: symptoms

A
  • usually not very severe
  • symptoms are rare except in heavily infected individuals
  • rash, itchiness from penetrating larvae
  • fever, lymphadenopathy, hepatosplenomgaly
165
Q

schitosomiasis: diagnosis and treatment

A
  • microscopic examination for eggs in faeces or urine
  • treated with drug
166
Q

schitosomiasis: control/prevention

A
  • eliminate habitat for snails which act as intermediate hosts
  • spraying with molluscicides
  • improves sanitation
  • avoid contact with fresh water in endemic areas