Microbiology Flashcards
Malaria
Vector
Female anopheline mosquito
Malaria
Lifecycle
-
Sporozoites
- Transmitted form
- Innoculated from mosquito saliva
- Rapidly cleared from blood in 15-30 minutes
-
Sporozoites ⇒ merozoites in hepatocytes
- Asexual replication
- Parasites contained within a Schizont
- Non-pathogentic infection
- Merozoites released from Schizont ⇒ RBC
-
Merozoite ⇒ trophozoites (ring stage) in RBC
- Asexual replication inside RBC ⇒ release
- Responsible for pathology
- Asexual replication inside RBC ⇒ release
-
Merozoite ⇒ gametocyte
- Sexual stage
- Picked up by mosquitos that feeds
- Gametocytes mature into gametes in mosquito gut
- Fertilization ⇒ zygote ⇒ motile ookinete ⇒ penetrates gut ⇒ sporozoites ⇒ salivary glands

Plasmodium vivax
and
Plasmodium ovale
-
Tertian fever patterns
- Sx every 3 days
-
Latent state
- Long term persistance in the liver
- Potential for reactivation
- Prefers immature erythrocytes or reticulocytes
- Lower parasitemia

Plasmodium malariae
-
Quartan fever pattern
- Sx every 4 days
- Frequently becomes synchronous in vivo
- Periodic release of parasites with fever
- Low parasitemia
- Prefers senescent RBCs
- No latent phase
P. falciparum
- Asynchronous replication of blood-stage
- Irregular fever pattern
- Developmental period of 14 days
- Characteristic crescent shape
- Trophozoite and schizont forms occur in visceral capillaries ⇒ sequestration
- Infects all RBCs ⇒ high parasitemia
- Causes cerebral malaria
- Reponsible for the most deaths

Malaria
Host Cell Invasion
- Active process of the parasite
- Interactions between parasite surface molecules and host receptors
- Contents of apical organelles responsible

Malaria
Lifecycle Comparison

Malaria
Fever Generation
- Usually paroxysmal except for P. falciparum
- Coincides with parasite release from RBCs
- Parasite products induce cytokine production
- GPI anchors
-
Hemozoin
- Malarial pigment produced from digestion of heme
- Elevated TNF-α and IL-1
Malaria
Infectious Determinants
-
Host factors
-
Sickle cell trait & other hemoglobinopathies
- Heterozygosity confirs resistance
-
Duffy blood group system
- Duffy ⊖ cells resistant to P. vivax
-
Sickle cell trait & other hemoglobinopathies
-
Parasite factors
- Multiplication rate
- 1% parasitemia = 5x1010 in blood
- Parasite “toxins”
-
Cytoadherence-dependent tissue distribution
- Cerebral sequestration
- Placental sequestration
- Multiplication rate

Cytoadherence
- Specific receptor-ligand interactions
- Form knob-like structions on surface of RBCs ⇒ rosettes
- Contain late stage trophozoites and schizonts (merozoites inside)
-
Knob-associated parasite proteins
- PfEMP-1, rifin, stevor, clag
- Host cell receptors on endothelium, placenta, and uninfected RBCs
Malaria
Diagnosis
- History and clinical symptoms
-
Peripheral blood smears
- Thick smears ⇒ parasite detection
- Thin smears ⇒ species ID
-
P. falciparum ⇒ only see ring stages and banana shaped gametocytes in blood
- Due to sequestration of mature stages
-
Detection of circulating parasite Ag or nucleic acid
- HRP2 ⇒ secreted Ag
- Lactate dehydrogenase
- Dipstick and PCR

Uncomplicated Malaria
- Often cyclic high fever and chills
- Malaise
- Myalgia
- Dizziness
- HA
- Weakness
- Nausea
- Diarrhea
Recurrent Malarial Infections
-
Relapse from dormant liver stage ⇒ hypnozoites
- P. vivax and P. ovale only
- May occur within months to years after primary infection
-
Reinfection, multiple infections
- Frequent w/ P. falciparum
- Occurs w/ P. vivax
- Immunity is region specific
Malaria
Recrudescence
- Occurs esp. w/ P. falciparum
- Due to:
- Partially effective host immune response
- Incomplete treatment and development of resistance
Severe Malaria
P. vivax
- Severe anemia
- Splenomegaly
- Splenic rupture
Severe Malaria
P. malariae
Immune complex glomerulonephritis associated with persistent low level of parasitemia
Severe Malaria
P. falciparum
- Splenomegaly
- Lactic acidosis
- Hypoglycemia
- Severe anemia
- Cerebral malaria
- Acute renal failure
- Pulmonary edema
- Hyperparasitemia
- Multi-organ failure
Cerebral Malaria
- Severe complication of P. falciparum
- Affects children 3-5 y/o
- Parasitized RBC cytoadhere to endothelium of brain microvasculature
- pRBCs form rosettes with uninfected RBCs
-
Pathogenesis
-
Ischemia/hypoxia
- Occlude capillaries ⇒ impair flow of blood, oxygen, nutrients to brain
-
Inflammation
- Inflammatory response ⇒ ↑ vascular permeability ⇒ tissue damage
-
Ischemia/hypoxia
-
Symptoms
- Impaired consciousness
- Cerebral dysfunction
- Coma
- Death ⇒ mortality rate 15-30% w/ tx
Severe Malarial
Anemia
- Criteria
- Hb < 7 g/dL or Hct < 20%
- Presence of any malarial parasitemia
- Almost always d/t P. falciparum
- Mainly affects children < 1 y/o in sub-Saharan Africa
Malaria
Immunity
- Acquired very slowly
-
Transient
- Wanes rapidly if person leaves the area
- Specific to region and strains
- Likely involves both Ab and cell-mediated immunity but poorly understood
Malaria
Vaccines
Still in development
- Sporozoites
- Circumsporozoite surface protein target
- Being tested
- Circumsporozoite surface protein target
- Erythrocytic stage
- Major merozoite surface protein
- Rhoptry proteins
- Cytoadherence molecules
- Gametocyte and zygotes
- Transmission blocking immunity
Malaria
“Anti-disease” Immunity
- People in endemic areas w/ persistent parasitemia may appear asymptomatic
- Sterilizing immunity may not be possible
- If possible, may be short lived and cause ↑ severity w/ subsequent infection
Hemoflagellates
- Flagellated, insect-transmitted protozoa
- Infects blood and tissues
- Have kinetoplasts ⇒ specialized mitochondria at base of flagella
-
Contains maxicircle and minicircle DNA
- Drug target and strain ID
-
Contains maxicircle and minicircle DNA
-
Leishmania and Trypanosoma
- Two major genera that cause human & domestic animal disease

Leishmania
Vector and Reservoirs
Vector ⇒ sandfly
(Phlebotomus and Lutzomyia)
Reservoirs ⇒ rodents, dogs, foxes, small mammals
Animal-vector-human cycle
Human-vector-human cycle
Leishmania
Lifecycle
- Extracellular promastigotes in sandfly vector
- Differentiate in salivary glands to metacyclic promastigotes ⇒ infectious form
-
Metacyclic promastigotes innoculated by sandfly during blood meal
- Motile and resistant to complement
- Metacyclic promastigotes invade macrophages
- Differentiate into amastigote form
-
Amastigotes multiply within phagolysosome of Mφ
- Cell lysis releases parasite for further spread
- Amastigotes transferred to sandfly when infected host bitten
- Differentiates back into promastigotes

Cutaneous Leishmaniasis
Organisms
Caused by 4 geographically specific species:
-
L. mexicana & L. braziliensis
- South and central America
- Can become visceral
-
L. major & L. tropica
- Asia, Africa, Mediterreanan, Middle East, Russia
- Typically remains cutaneous

Cutaneous Leishmaniasis
Pathogenesis
-
Red papule develops @ site of bite after 1 wk - 2 months
- Secondary bacterial infections problematic
- Becomes hard and crusted
-
Usually self-limiting but may persist for months to years
- Resolution associated with protective immunity

Diffuse Cutaneous Leishmaniasis
- Occurs with ineffective immune responses
- Esp. cell-mediated
- See massive, disseminated nodular skin lesions
- Resembles leprosy

Mucocutaneous Leishmaniasis
- Usually caused by L. braziliensis
- Central and South America
- Develops from cutaneous leishmaniasis
- Spreads to mucosal surfaces
-
Destruction of mucous membranes and tissues
- Edema
- Secondary infections
- Severe and disfiguring facial lesions
- Intense inflammatory responses
- May involve autoimmune component

Visceral Leishmaniasis
Organisms
“Kala-azar or Black Fever”
- Caused by 3 regionally specific species
-
L. donovani
- Asia, Africa, SE Asia
-
L. chagasi
- South and Central America
-
L. infantum
- Mediterranean basin
-
L. donovani

Visceral Leishmaniasis
Pathogenesis
“Kala-Azar or Black Fever”
- Incubation ⇒ weeks to years
- No characteristic skin lesion
-
Parasites invade and proliferate in Mφ of liver and spleen
- Gradual onset fever and anemia
- Weight loss
- Marked hepatosplenomegaly
- Glomerulonephritis
-
May continue as a persistant chronic illness
- Death in 1-2 years
-
May progress to fulminant deilitating disease
- Death in weeks
- HIV patients
- Severe disease w/ unusual manifestations
- Can invade CNS
- Successful treatment for L. donovani can result in Post-Kala Azar Dermal Leishmaniasis (PKDL) in some pts

Post-Kala Azar Dermal Leishmaniasis
(PKDL)
- Follows after successful treatment of visceral leishmaniasis w/ L. donovani
- Parasites persist in cutaneous nodules to varying degrees

Leishmaniasis
Immunity
Different clinical pictures determined by subset of responding T-cells
-
Th1 response
- IFN-𝛾 and Mφ activation
- Strong cellular immunity
- Limited course of disease
-
Th2 response
- Strong Ab response
- Ineffective against intracellular parasites
- Disease progression
- Believed that parasites persist for life ⇒ reactivation
Leishmaniasis
Diagnosis
-
Microscopic examination of specimen
- Cutaneous/mucocutaneous ⇒ skin ulcers
- Visceral ⇒ tissue biopsy or bone marrow aspirates
- Demonstrate amastigotes in macrophages ⇒ Leishman-Donovan bodies
- Culture of specimen
-
Leishmanin skin test
- DTH serologic testing
- Not for disseminated disease
- Limited use in highly endemic areas
Leishmaniasis
Treatment
- Ulcer management
- Prevention of secondary infections
-
Severe localized or disseminated disease
-
Pentavalent antimonials
- Heavy metal drugs that intefere w/ sulfhydryl groups
-
Pentamidine
- Interferes with DNA
-
Amphotericin B
- Binds sterols in parasite membrane
-
Pentavalent antimonials
- High toxicity of drugs, high cost, treatment failure
Trypanosoma
Life Cycle
-
Epimastigote in insect vector
- Flagella w/ partial undulating membrane
-
Trypomastigote in mammalian host
- Flagella w/ full undulating membrane
-
Amastigote found intracellularly in infected mammalian host
- Not all species
African Trypanosomiasis
“African Sleeping Sickness”
- Caused by Trypanosoma brucei species
- Causes disease in human and lifestock
- Humans ⇒ sleeping sickness
- Cattle ⇒ Nagana
Trypanosoma brucei
Vector
Tsetse flies

Trypanosoma brucei
Species
3 subspecies of Trypanosoma brucei
-
T. b. gambiense ⇒ more chronic
- West and Central Africa
- Human disease
- Domestic pigs reservoir
-
T. b. rhodesiense ⇒ more acute
- East Africa
- Human disease in hunters, travelers
- Cattle and sheep reservoirs

Trypanosoma brucei
Lifecycle
- Metacyclic trypomastigotes injected by Tsetse fly
- Transform into bloodstream trypomastigotes remain extracellular in the blood, lymph, and spinal fluid
- Divide by binary fission
- No intracellular amastigote state present

African Trypanosomiasis
Pathogenesis
“African Sleeping Sickness”
- Chancre often develops @ site of bite
- Parasites disseminate into through blood stream and lymphatics 2-3 weeks later
- Fever
- Myalgias
- Arthralgia
- Lymph node enlargement
- Swelling of posterior cervical lymph nodes ⇒ Winterbottom’s sign
- Chronic disease develops over several weeks of parasitemia
- Body makes neutralizing Ab
- Parasites change surface Ag
- Cycles of blood parasitemia and cyclic fever pattern
- Lymphadenopathy, HA, and neurological sx
- Also kidney damage and myocarditis with T. b. rhodesiense
- Localization of parasites in small blood vessels of heart and CNS
-
‘Sleepining sickness’ starts after CNS invasion
- Meningoencephalitis
- Lethargy, tremors, coma
- Death from CNS damage, heart failure, or secondary infections
- Usually within 9-12 months if untreated

African Trypanosomiasis
Immune Response
Effective humoral immunity.
Periodic variation of parasite’s major surface Ag ⇒ chronic infection and fluctuating parasitemia
Results from DNA rearragements of “silent” gene copies to “expression-linked” locus
African Trypanosomiasis
Diagnosis and Treatment
-
Diagnosis
- Microscopic examination of blood, CSF, or lymph node aspirates
- Demonstration of trypomastigotes
-
Treatment
-
Acute blood and lymphatic stages
- Suramin
- Pentamidine
-
CNS-penetrating neurologic stage
- DFMO (Difluoromethyl ornithine)
-
Melarsoprol
- Very toxic, up to 5% die from tx
-
Acute blood and lymphatic stages
- Prevention
- Tsetse fly vector control
- Elimination of animal reservoirs
- Largely unsuccessful
American Trypanosomiasis
“Chagas’ Disease”
- Caused by Trypanosoma cruzi
- Found in central and south America
Trypanosoma cruzi
Transmission
- 1° transmission
-
Vector ⇒ Reduviid bugs
- “Kissing bugs”
- Triatoma infestans
-
Reservoirs
- Domestic dogs and cats
- Wild animals like rodents, armadillos, raccoons, opossums, etcs
-
Vector ⇒ Reduviid bugs
- 2° transmission
- Blood transfusions
Trypanosoma cruzi
Lifecycle
-
Metacyclic trypomastigotes present in feces of reduviid bugs
- Bugs often bite near the eyes or lips
- Parasites released in bug feces
- Rubbed into bite or conjunctiva
- Blood trypomastigotes can infect nearly every cell type
- Prefers macrophages, cardiac muscle cells, and glial cells
- Enters via receptor-mediated endocytosis
-
Escape from phagosome into cytosol
- TcTox, Cholesterol-dependent cytolysin
- Differentiate into amastigotes in host cell cytoplasm and divide
- When cytoplasm full, revert back into flagellated trypomastigotes
- Infect new host cells upon release
- Asymptomatic infection or acute febrile disease

Acute Chagas’ Disease
Primarily in children:
-
Chagoma develops at site of bite
- Erythematous indurated nodule
- Infection via conjunctiva ⇒ unilateral chagoma of the eye ⇒ Romana’s sign
-
Acute infection progresses to
- Fever
- Myalgias
- Fatigue
- Hepatosplenomegaly
- Lymphadenopathy
- The patient may
- Die from infection within several weeks
- Recover completely
- Enter chronic phase

Chronic Chagas’ Disease
Parasites proliferate and invade the heart, liver, spleen, and lymph nodes.
May develop years after acute infection.
- Hepatosplenomegaly
- Myocarditis and cardiomyopathy
-
Megacolon / megaesophagus
- Due to destruction of ANS nerves
- Progressive destruction of NMJ
- CNS involvement
- Granulomas
- Cyst formation
- Meningoencephalitis

African Trypanosomiasis
Immunity
- Activation of macrophages
- CD8+ T cell mediated lysis of infected cells
- Ab opsonization and lysis of extracellular trypomastigotes by complement
- Chronic disease may involve an autoimmune component
- No vaccines available
African Trypanosomiasis
Diagnosis and Treatment
-
Diagnosis
-
Acute disease
- Microscopic examination of blood or biopsy
-
Chronic disease
- Serological tests
- IFA, ELISA, complement fixation
- Clinical signs
- Serological tests
-
Xenodiagnosis in endemic areas
- Uninfected reduviid bugs allowed to feed on pt and parasites detected in vector
-
Acute disease
-
Treatment ⇒ highest efficacy during acute infection
- Nifurtimox
- Benznidazole
- Allopurinol
Streptococcus pyogenes
Characteristics
- Lancefield group A strep ⇒ GAS
- Gram ⊕ cocci in chains
- Catalase ⊖
- β-hemolytic
- Bacitracin sensitive
GAS
Virulence Factors
-
M protein + lipotechoic acid (LTA) ⇒ pili
- M protein ⇒ adhesin for attachment to keratinocytes
- Antiphagocytic and anti-complement
- Immunologically cross-reactive to human cardiac muscle tissue ⇒ RHD
- M protein ⇒ adhesin for attachment to keratinocytes
-
Capsule
- Anti-phagocytic
- Made of hyaluronic acid ⇒ non-immunogenic
-
Streptococcal Pyrogenic toxin (SPE)
or erythrogenic toxin- 3 forms ⇒ SPE A, B, C
- Direct toxic damage to skin
- Produce DTH response ⇒ rash in Scarlet fever
- Superantigens ⇒ TNF and IL-1 production
-
Lysogeny/lysogenic conversion for SPE A and C
- Transmitted by bacteriophage
-
Streptolysin O and Streptolysin S
- Hemolytic and cytotoxic to WBCs
-
Streptodornase (DNAse), streptokinase, hyaluronidase
- Faciliate invasion of tissues and dissemination
S. pyogenes
Pathologies
-
Primary infections
⇒ acute pyogenic infections of any tissue- Pharyngitis or tonsillitis
- Scarlet fever
- Impetigo
- Otitis media, sinusitis, mastoiditis, bacteremia, PNA
-
Post-streptococcal sequelae
⇒ non-suppurative, non-infectious sequelae following primary infection- Acute Rheumatic Fever (ARF) / Rheumatic Heart Disease (RHD)
- Post-streptococcal Acute Glomerulonephritis (PSAGN)
Streptococcal Pharyngitis
Epidemiology and Transmission
- Most common cause of bacterial pharyngitis ⇒ 12-30%
- Winter and early spring
- Greatest incidence in 5-15 y/o
- Exogenous transmission by respiratory droplets
- Asymptomatic nasal and pharyngeal carriers
- Children can be chronically infected after treatment
Strep Pharyngitis
Clinical Manifestations
- Sore throat w/ white exudates
- Tonsils enlarged and erythematous
- Anterior cervical lymphadenopathy
- No cough
- Fever
- Malaise
- HA

Scarlet Fever
Can accompany pharyngitis or impetigo.
- Generalized punctate erythematous rash ⇒ “sandpaper rash”
- Caused by pyrogenic toxin (SPE)
- Carried by tox ⊕ lysogenic bacteriophage
- Caused by pyrogenic toxin (SPE)
- Strawberry tongue
- Fever

Acute Rheumatic Fever (ARF) / Rheumatic Heart Disease (RHD)
Pathogenesis
-
Follows respiratory but not skin infections
- Typically 1-5 wks s/p strep pharyngitis
- Type II hypersensitivity
-
Cross-reactivity of Ab against M-protein
- Certain serotypes considered Rheumatogenic
- Targets heart, joint, blood vessels, and nervous tissue
ARF
Epidemiology
- 0.5-3% incidence in US
- Much higher in developing countries
- May follow severe or asymptomatic infection
- Peak age 6-20 y/o
ARF/RHD
Clinical Manifestation
-
Carditis
- Inflammation of myocardium or endocardium
- Can see polycarditis w/ all 3 layers
- Mitral and/or aortic valve damage
- Polyarthritis
- Rash (erythema marginatum)
- Chorea
- Subcutaneous nodules

Post-Streptococcal Acute Glomerulonephritis
(PSAGN)
-
Follows cutaneous or respiratory infection
- Typically 1-2 wks s/p strep pharyngitis
-
Type III Hypersensitivity
- Strep Ag-Ab complexes deposition on glomerular basement membrane and excessive inflammatory response
-
Clinical features
- Facial edema
- Dark urine / hematuria
- Proteinuria
- HTN
Acute Strep Infection
Diagnosis
Pharyngitis and Scarlet Fever
-
Rapid Ag Detection
- Performed in office
- High specificity ⇒ ~100%
- Low sensitivity ⇒ 70-90%
- Need to culture
-
Culture from swab/blood samples
- Gram ⊕ cocci in chains
- Grown on blood agar ⇒ β-hemolytic
-
Catalase ⊖
- Staph ⇒ catalase ⊕
-
Bacitracin sensitive and CAMP ⊖
- Group B strep ⇒ resistant and CAMP ⊕

Strep
Serologic Tests
RF and PSAGN
-
Ab to 5 group A strep Ag
- Streptolysin O (ASO) ⇒ most widely used
- DNAse B
- Streptokinase
- Hyaluronidase
- NADase
-
Streptozyme test
- Combo test for all 5 Ab’s
- Based on agglutination of Ag-coated RBCs by Ab in pts serum
- Used for dx of RF/PSAGN and monitoring progress
S. pyogenes
Treatment
- Penicillin, ampicillin, or amoxicillin x 10 days
- Erythromycin for pts w/ PCN allergies
- No documented cases of resistance
Post-strep Sequelae
Prevention
-
Starting abx within 10 days of onset for strep pharyngitis protects against rheumatic fever
- Complete course must be taken
-
RHD pts need anti-microbial prophylaxis
- Min. 10 yrs
- Recurrent strep infections can worsen disease
- Treatment does not protect against glomerulonephritis
Staphylococcus aureus
- Characteristics
- Gram ⊕ cocci in clusters
-
Catalase ⊕
- Differentiates Staph from Strep
-
Coagulase ⊕
- Differentiates S. aureus from other Staph
- β-hemolytic
- Most Staph infections are endogenously acquired
- Normal flora of skin and nares in 30-40%
- > 90% resistant to PCN
- Penicillinase
- Alterations to PBP
Staphylococcus epidermidis
- Characteristics
- Gram ⊕ cocci in clusters
- Catalase ⊕
- Coagulase ⊖
- 𝛾-hemolytic, white colonies (non-hemolytic)
- Normal flora of the skin, nose, throat
- Most common cause of prosthetic valve endocarditis
- Ass. w/ infections of cardio and ortho prostheses, CSF shunts, vascular grafts, catheters
- Makes HMW polysacc. slime ⇒ adherence to FB surfaces
- Most strains resistant to PCN
- Many resistant to β-lactamase-resistant PCN
Streptococcus
- Gram ⊕ cocci in chains
- Catalase ⊖
- Lancefield’s grouping A-U based on C carbohydrate
- Non-groupable strep
- Viridans group
- Strep. pneumoniae
- Peptostreptococcus ⇒ anaerobic
Viridans Streptococci
Organisms
- S. mutans
- S. mitis
- S. salivarius
- S. sanguis
Viridans Streptococci
Characteristics
- Catalase ⊖
- α-hemolytic
- Optochin-resistant
- Normal flora of mouth, skin, nasopharynx, GU tract, and GI tract
- Low virulence
-
Clinical diseases include:
- Dental caries ⇒ S. mutans
-
Infective endocarditis
- Most frequent cause of NV-SBE
- Usually 2/2 damaged heart tissue
- Often after dental procedures
- S. sanguis most common
- Usually sensitive to PCN
Nutritionally Variant Strep
- Can cause culture negative endocarditis
- Do not grow on standard lab media
- Need L-cysteine and Vit B6
- Generally belong to viridans strep
- S. mitis common
HACEK Organisms
- Includes:
- Haemophilus
- Aggregatibacter (Actinobacillus)
- Cardiobacterium
- Eikenella
- Kingella
- Fastidious, slow growing, gram ⊖ organisms
- Normal flora
- Possible cause of culture negative endocarditis
Enterococcus
- Previously considered group D strep
- Characteristics
- Gram ⊕ cocci in short chains, pairs, singles
- Catalase ⊖
-
Grow in 6.5% NaCl at 45°C
- Remaining group D strep cannot
- Most are alpha or gamma hemolytic
- Few are beta hemolytic
- Bile-esculin ⊕
- Normal flora of skin, URT, GI, GU
-
E. faecalis ⇒ most important clinically
- Opportunistic pathogen
- UTI
- Infective endocarditis
- Meningitis
- Bacteremia and septicemia
- Intraabdominal and pelvic infecitons
- Opportunistic pathogen
- Ampicillin or penicillin + aminoglycoside indicated
- Vancomycin for resistant strains
- VRE strains exist