Microbial pathogens 1 Flashcards
a pathogen
a microorganism that is able to cause a disease in a plant or animal or insect
pathogenicity
the ability to produce disease in a host organism
more virulent ∝
more capable of causing disease
microbes express their pathogenicity by means of
virulence
virulence =
term which refers to the degree of pathogenicity of the microbe
determinants of virulence
any genetic, biochemical or structural features that enable it to produce disease in a host
Two main mechanisms underlying bacterial pathogenicity
-The ability to invade tissues (invasiveness)
-ability to produce toxins (toxigenesis)
invasiveness =
-ability to bypass host defence mechanisms
-production of extracellular substances which facilitate invasion (like adherins)
toxigenesis the two types are
-two types of toxin EXO/ENDOtoxins
exotoxins
released from bacterial cells and may act at tissue sites removed from the site of bacterial growth
botulinum and cholera toxin
endotoxins
cell-associated substances that are structural components of the cell walls of GRAM NEGATIVE bacteria (capsule on LPS)
human pathogens can enter through (main sites)
-respiratory
-gastro-intestinal
-urinary or genital tracts
human pathogens can enter broken skin …
-by insect bites
-accidental surgical trauma
opportunistic pathogens are carried as
part of the normal human flora
acts as ready source of infection in compromised host
transmission of bordetella pertussis (more complex)
-respiratory
-requires contact with infectious material since the organisms survives poorly in environment
for pathogens where the primary source is environmental (infection follows ingestion) pathogens MUST
remain viable in different environmental conditions
the environment that can be colonised by a pathogen are critical in determining its reservoirs and potential modes of transmission
Psychrophile
grow best at low T
psychotroph
able to grow at low T but prefer moderate T
mesophile
most bacteria live in animals
thermophile
amount all thermophiles is wide variation in optimum and maximum T
growth rate curves for temperates effect
not symmetrical
-linear increase until optimum where the cell can’t function at high temps
cold shock adaptation
-inhibition of protein synthesis
-causes a growth lag known as the acclimation phase during this a group of cold shock proteins (Csp) are dramatically induced
chaperone
protein that check other proteins are folding correctly
cold shock proteins class 1
ensure ribosome/DNA/RNA synthesis is working correctly
cold shock proteins class 2
conditioning ribosome to conduct protein synthesis in cold conditions
Listeria
-non spore forming gram positive bacilli
causes LISTERIOSIS
risk:pregnant/immunocomprimised
CAPABLE OF GROWTH OVER A WIDE RANGE FROM 2 TO 40°C
how is listeria spread
infected foods
listeria virulence factors-escape from single membrane vacuole
slide 16 for detail
proteins and enzymes that punch holes in membrane
listeria virulence factors-cell to cell spread
slide 16 for detail
-Protein polymerising actin in wrong place (at base of cell allowing it to propel)
listeria virulence factors-required for escape from double membrane vacuole
slide 16 for detail
a phospholipase that cleaves the head group from many different kinds of lipids
listeria virulence factors-regulation of virulence factors
slide 16 for detail
positive regulator of virulence genes
how is listeria controlled in food
-high temps while cooking
-grow foods with 12% NaCL and with ph range of 4.4 to 9.8
-cook meat thoruoughly
Legionella pneumophila
-motile aerobic gram negative rod
-lives in phagocytic cells (macrophages)
-live in air conditioning units
CAUSES- pneumonia
temp and legionella
-humans are accidental hosts as CELLS EXPRESS MORE FLAGELLIN RNA and protein at 30°C than 37°C
-adherence is also temp dependent
Gram positive bacteria simple definition
only inner membrane
pH of natural environments varies from
0.5(acid) to 10.5 (alkali)
pH 0 = compared to pH 14 =
pH 0 = 1 mole per litre of Hydrogen ions (10^-14) moles per litre of OH^-
pH 14 = 10^-14 mole per litre of Hydrogen ions (1) moles per litre of OH^-
most free-living prokaryotes can grow over a range of _ pH units
3
pH growth rates are a _______ curve
symmetrical due to subtle effect of pH
Acidophile =
acid loving
most cells are _____philes
neutro
Thiobacillus species
-Acidophiles
-require low pH for growth because their membranes dissolve and the cells lyse at neutrality
obligate alkali-holes can grow around pH
10
-in an alkaline bacillus species a Na+ gradient (instead of pmf) supplies the energy for transport and motility
pmf
proton motor force
-electrochemical gradient forced due to ETC
optimal growth pH is the pH of the
extracellular environment
-extremes are 4.6 (acidophil) and 9.5 for (alkaliphile)
most are NEUTROPHILES
problems posed by acidic conditions
3
-capacity for nutrient acquisition and energy generation
-cytoplasmic pH homestasis
-protection of proteins and DNA
acidic conditions effecting protection of proteins and `DNA two mechanisms that can help achieve this
chaperone proteins
alkalisation of the periplasm
helicobacter pylori
-gastric pathogen
-gram negative curved rod
highly motile due to flagella
helicobacter pylori causes what
-gastric and duodenal ulcers
-ulcers associated with development of gastric cancer
helicobacter pylori main virulence factors
-flagella
-urease = helps neutralise the acidic pH of the stomach
-adhesins
-vacuolating toxin
Koch’s postulates
-the organism is always present in animals suffering from the disease but not in healthy
1)organism cultivated in pure culture away from the animal
2)susceptible animals should initiate the disease characteristics
3)organism re-isolated from experimental animals and cultured (same as ORIGINAL)
Barry Marshall
-drank culture of helicobacter pylori and shown to have an inflamed stomach two weeks later
how does H. Pylori survive in the acidic pH of the stomach - WHERE DOES IT GO
colonises mucin layer that covers the gastric mucosa
-mucus resists diffusion of protons from stomach acid because it is composed of negatively charged sulphated polysaccharides
how does H. Pylori survive in the acidic pH of the stomach - short term pH protection during motility
urease hydrolyses the urea secreted by gastric cells to produce ammonia and CO2- the ammonia neutralises stomach acid in its immediate vicinity
how does urease work?
urease is intracellular so the organism takes up urea and exports ammonia very efficiently to the periplasm where the pH can rise to approx 6
H. Pylori adhesions and neutrophils
BabA: adhesin recognising lewis b antigens which binds sulphated mucin sugars on epithelial cells
-NAP: neutrophil leads to inflammation
-VacA: vacuolating cytotoxin produces large vacuoles in mammala cells
UreI is a H.Pylori sensor
-an inner membrane protein that facilitates urea entry in a pH-controlled way
-UreI consists of 6 transmembrane regions
-Periplasmic loops and carboxy terminus contain a number of histidine and acidic residues that act as pH sensors through their ionisation
Salmonella typhimurium characteristics
-Gram negative rod
-motile
-causes gastroenteritis
Salmonella typhimurium main virulence factors
-acid tolerance responses
-adhesins
-invasion of mucosal cells
-type III secretion system = contact dependent (like a syringe)
effectors that pathogens produce are proteins (hard to diffuse through membrane)
Salmonella typhimurium acid tolerance response type III is induced when …
within acidified phagosomes of macrophages
cultured Salmonella typhimurium grown at neutral pH and shifted to lower pH survives well at pH values down to 4 but …
if cells are able to ADAPT (by growth at pH 6 for a generation) they can survive down to pH 3
DNA-binding protein fur
regulates a subset of acid shock proteins so fur senses pH as well as iron
mechanisms of acid resistance in gram positive - proton pumps
F1/F0 -ATPases from tolerant bacteria are less sensitive to low PH
-glutamate decaboxylases (GAD) : consume protons via glutamate decarboxylation the reaction product (GABA) is exported
mechanisms of acid resistance in gram positive - regulators
often of glycolytic enzymes to facilitate rapid growth recovery when pH stress is removed
mechanisms of acid resistance in gram positive - CELL DENSITY
a quorum sensing system and biofilm growth allow for increased acid tolerance in S. mutans
mechanisms of acid resistance in gram positive - envelope alterations
s mutans has increased levels of monounsaturated and longer chain fatty acids
Obligate aerobes
-require O2 for growth; they use O2 as final electron acceptor
obligate anaerobes/aerophobes
-do not need or use O2 as a nutrient
-O2 is TOXIC
-kills or inhibits growth
obligate anaerobes may live by
-fermentation
-anaerobic respiration
-bacterial photosynthesis (H sulphate as terminal e acceptor)
-methanogenesis (methane from acetate)
facultative anaerobes/ facultative aerobes
-organisms that can switch between aerobic and anerobic types of metabolism
aerotolerant anaerobes
-bacteria with an exclusively anaerobic (fermentation) type of metabolism but they are insensitive to the presence of O2 they live by fermentation alone
ROS
reactive oxygen species
what is generated by cells in the presence of O2
oxygen radicals can kill the cell
FAD
flavodeninedinucleotide
-cofactors involved in oxidation reactions therefore can be inhibited
all cells contain enzymes capable of reacting with O2
-oxidation of flavoproteins by O2 invariably results in the formation of H2O2(hydrogen peroxide)
singlet oxygen
-produced by chlorophyll and other pigments in cells that react with O2 in the presence of light
ANOTHER RADICAL which is potent oxidising agent in biological systems
superoxide dismutase (SODS)
enzyme
-all organisms that can live in teh presence of O2 contain superoxide dismutase prevents lethal accumulation
catalase
decomposes H2O2
certain aerotolerant bacteria such as lactic acid bacteria lack catalase so instead
they decompose H2O2 by means of peroxidase
enzymes which derive electrons from NADH2 to reduce peroxide to water
Obligate aerobes lack
superoxidase
dismutase
catalase
all photosynthetic and some non are protected from lethal oxidations of singlet oxygen by their possession of
carotenoid pigments which physically react with the singlet oxygen radical and lower it to its non-toxic triplet state
clostridium spp. - obligately anaerobic pathogens
-most clostridia lack respiratory chain cytochromes and the ENZYMES
-they obtain ATP by substrate-level phosphorylation
-a number of clostridia ferment sugars producing butyric acid ; other ferment amino acids
-clostrdia are in soil and some in human flora
substrate-level phosphorylation
the formation of ATP from ADP and a phosphorylated intermediate
-due to high energy phosphate bonds from organic intermediates are transferred to ADP
Clostridium botulinum
-most fatal food poisoning
-commonly found in soil and aquatic sediments
-extremely potent (1mg of pure toxin can kill 1 million guinea pigs)
Clostridium botulinum how can it be in food
-poorly canned foods create an anaerobic environment unfilled spores germinate and produce toxin
Clostridium botulinum different strains produce …
7 exotoxin types (A,B,C1,D,E,F,G)
types C and D are encoded by lysogenic bacteriophage that infect the bacteria
lysogenic bacteriophage =
inserts itself into genome
bacteriophage = viruses that target bacteria