Micro/Immuno Flashcards
host-parasite relationship in humans
dynamic; based on the immune system of the host and the virulence factors of the parasite
most common parasitic diseases in the US
- Trichomoniasis: (Tricomonas vaginalis) sexually transmitted
- Giardiasis: (Giardia lamblia) loss of appetite and diarrhea
- Cryptosporidiosis: (Cryptosporidium) from bad water and causes diarrhea
- Toxoplasmosis: (Toxoplasma gondii) raw meats and congenital transmission in cats
parasite lifecycles
immature parasite partially develops in an intermediate host then grows to maturity in a principal/definitive host
the 2 classifications of parasites
- Parasitic Protozoa (Unicellular)
2. Parasitic Helminths (Multicellular) –> “-todes”
5 ways host animals can be infected by parasites
- ingestion of larvae, eggs or cysts
- eating the intermediate host
- penetration of parasite into host (foot–>vessels–>heart–>lungs–>ingested–>SI)
- maternal transmission (congenital)
- vector transmission
parasitic diseases
can be gastrointestinal, blood borne or in tissues, chronic but may remain dormant until host is immunosuppressed and may not show symptoms or could be life threatening
innate immune system
prevents colonization through release of specific immune cells and cytokines
adaptive immune system
antibody formation to damage, neutralize and prevent spread of infection
eosinophilia
high WBC count; eosinophils can destroy parasites
IgE
increases with parasitic infections and binds to mast cells and basophils; binds to antigen and its Fc portion binds to cells inducing degranulation
the 6 defense mechanisms of parasites from protective host responses
antigenic:
- concealment (antigens in host’s cells)
- variation (novel antigens by mutation)
- shedding
- mimicry (incorporation of host antigens on parasite’s surface)
- immunological subversion
- immunologic diversion (polyclonal B-cell activation)
bacteria vs. parasites
bacteria have simple lifecycles and are unicellular whereas parasites have complex lifecycles and can be either unicellular (protozoa) or multicellular (helminthes)
obligatory parasite
dependent on host
facultative parasite
free-living in the environment or parasitic
accidental parasite
affects unusual host
temporary parasite
visits host for feeding
permanent parasite
lives in (endoparasite) or on host (ectoparasite)
opportunistic parasite
produces disease in an immunodeficient host
Creutzfeldt-Jacob disease
most frequent of the human prion diseases
three different types: (Sporatic-sCJD, Familial- fCJD and Iatrogenic- iCJD)
sCJD symptoms
spongiform encephalopathy, rapid loss of brain function (concentration, memory and judgment difficulties), mood changes, sleep disturbances, myoclonus provoked by startle and death within one year (1/1,000,000 have it)
cause of prion diseases
proteins (protein-only hypothesis); differences in prions lead to incubation differences
how to sterilize prions
autoclaving since they are resistant to conventional physical decontamination methods
vCJD symptoms
loss of brain function (slower than sCJD), peripheral pathogenesis involving lymphoreticular tissues, death
Variant Creutzfeldt-Jacob disease
type 4 prion (detected by ring of spongiform vacuoles after staining), bovine-to-human transmission of BSE (not in muscle or milk), 1/2,000 carry it and incubation period is 20-30 years
sCJD diagnosis
brain biopsy, detection of 14-3-3 protein in CSF, EEG pattern or abnormal T2-weighted MRI signal
PrP^c
35 kDa glycoprotein encoded by Prnp gene in host
PrP^sc
Scrapie/misfolded form of PrP^c that leads to prion disease and comes from a mutation of exogenous source
*there are 4 types distinguished by bands produced from protease digestion by proteinase K
prion self replication mechanism
native and prion conformers bind creating the “seed” which increases in size to an amyloid fibre (aggregates of insoluble fibers) which disseminates by fragmentation to spread the infection
populations infected with sCJD vs. vCJD
- sCJD- mean is 65 years old with a higher prevalence slightly in females and significantly in whites
- vCJD- mean is 29 years old
BSE and vCJD patterns
BSE peaked in 1992 whereas vCJD peaked 8 years later in 2000 due to BSE’s predicted incubation period os 10-20 years
viruses are referred to as:
“filterable agents” since they are so small that they pass through a filter (pores= 220nm)
virus replication
they only replicate in cells thus are obligate intracellular parasites (do not form colonies on agar plates such as bacteria)
virus diversity
very genetically variable and there are many virus species
caspid
protein shell that encapsulates the nucleic acid genome and can be helical or icosahedral (20-sided crystal) in symmetry
**capsid shape is independent of genome
virion
the particle encoded by a virus genome which can be enveloped (lipid bilayer coating obtained from host cell) or naked (lacking an envelope)
3 basic gene modules of viruses
- capsid proteins
- replicon (has what is necessary for replication)
- proteins (interact with the host)
virus classification
- Host Cell/Kingdom
- eukaryotic or prokaryotic
- plant, insect or animal - Genome Type
- RNA or DNA
- single or double stranded - Virion Structure
- enveloped or naked
- helical, icosahedral or complex
survival mechanisms of viruses
- capsid for protection (is encoded by genome)
- information in genome to help with infection, replication, intracellular survival and virion assembly
- transmission to a new host ensures that the virus will not die off
nucleocapsid
at the center and similar to the caspid
tegument
gel that is in between capsid and envelope
matrix
gives structure that lies underneath the envelope
envelope
membrane surrounding the particles (lipid bilayer contributed by the host cell)
glycoproteins vs. spikes
spikes embedded in the membrane which require glycosylation whereas spikes or fibers do not require glycosylation
inside to outside structure of virus
genome–>nucleocapsid–>tegument–>matrix–>envelope–>glycoprotein–>spikes
cytopathic effects (CPE)
damage to host cells that can be brought on by virus infection that can be used to study virus replication and infectivity
what does a virus need for growth?
the right host (tropism), correct receptors (susceptible), appropriate intracellular environment (permissive), biosynthetic machinery (virus does not have genes for this so the healthy cell’s machinery is used), building blocks (nucleotides, ATP, lipids, sugars and AA’s)
steps of virus replication
- recognition
- attachment
- entry (penetration of fusion)
- uncoating
- mRNA transcription
- protein synthesis (translation)
- replication of genome
- virions assembly
- egress (lysis, budding or exocytosis)
host range
the preferred species
tissue tropism
the preferred cell type/host
susceptible
cells that a virus can enter due to their receptors
permissive
an appropriate intracellular environment allowing for virus replication and virion synthesis
penetration
engulfment of entire virion into cell through receptor-mediated endocytosis, phagocytosis or pinocytosis
fusion
envelope of virion fuses with the plasma membrane leaving parts of the virion behind
eclipse phase
starts with the uncoating of the caspids to release the genome into the cytoplasm of the host cell
no virus is recovered during the replication and assembly phases
ends with the assembly of virions in which viral DNA is inserted into capsid proteins that have formed an empty shell
where can uncoating occur?
the plasma membrane, within endosomes and at the nuclear pore
what regulates mRNA synthesis?
viral and host transcription factors
what makes mRNA?
viral or host polymerases
what translates the viral mRNAs?
the host machinery translated them into protein
how is the genome replicated?
viral and host DNA and RNA polymerases make new genomes using host cell nucleotides
routes of transfer of cell associated virions
cell-to-cell spread and cell fusion (syncytium formation)
this produces virus plaques
cell lysis
RNA viruses
RNA is the genetic material and the template for protein synthesis
RDRP
RNA-Dependent RNA polymerase, located in the cytoplasm, efficiently transcribes RNA into mRNA and helps copy the genomes of RNA viruses on cell membranes
- used since cells do not have enzymes to do this
- low fidelity
sense strand
+ strand of mRNA
antisense strand
- strand the is the template for mRNA
Poliovirus (Picornaviridae)
+ ssRNA genome with linear mRNA molecule which recognizes CD155 receptor and infects epithelial cells only in humans but can spread to muscles and neurons
can be prevented with vaccination with a live or killed virus and its transmission is fecal-oral and persists in water supply