Metabolism Cont'd, Control & Skeletal Muscle Flashcards
Glycolysis
10 enzymatic reactions that converts a 6-carbon molecule of glucose into 2,3-carbon molecule of pyruvate (forward reaction)
describe glycolysis
- > requires glycolytic enzymes and carbohydrates
- > occurs in the cytosol of most cells
- > produces little energy by can proceed without oxygen or mitochondria
- > catabolizes carbs (primarily glucose), can use fructose and galactose as these are converted into intermediates of glycolysis early in the pathway
which types of cells use the glycolysis pathway for energy production, why?
Red blood cells
- > does not contain any organelles (no mitochondria) but they do have cytosolic enzymes required for glycolysis
Certain types of skeletal muscles
- > some have low levels of mitochondria
characteristics of glycolysis
- > uses monosaccharides
- > occurs in cytosol (not organelle dependant)
- > net 2 ATP formed/molecule glucose (4 total but we need to use 2 to continue the process)
- > less ATP formed than other pathways, but supplies pyruvate to Kreb’s cycle and NADH + H+ to oxidative phosphorylation pathways
- some pyruvate is converted to lactate which can be used to regenerate NAD+
Starting/input equation for glycolysis
Glucose + 2ADP + 2Pi + 2NAD
final equation of glycolysis
2 Pyruvate + 2ATP +2NADH+ 2H+ +2H2O
- > 2NADH+ 2H+ are then used in oxidative phosphorylation
- > pyruvate can be used in the Kreb’s cycle or converted into lactate and used in OP
increased metabolic demands in the body (i.e. intense muscle exercise) causes what?
Incr. metabolic demands leads to increased lactate production (pyruvate conversion) which is released into the blood and sent to either the liver, where it’s used as a precursor for glucose production, or it’s used by the heart, brain, and other tissues where it is converted back to pyruvate.
Krebs Cycle
- > aka. tricarboxylic acid cycle (TCA cycle) and citric acid cycle
- > occurs in the mitochondria of most cells (red blood cells can’t use this pathway
- > utilizes molecular fragments formed during carb, proteins and fat breakdown
- > requires acetyl CoA (derived from Vit B5), that is supplied by glycolysis, as an entering substrate
- > require aerobic conditions (although oxygen is not directly used)
- > does not produce much ATP but does produce products required by OP
How does the Kreb cycle work?
- > it works by transferring acetyl groups from one molecule to another
- > 2 carbon atoms enter the Krebs cycle as part of the acetyl group and 2 carbons leave in the form of CO2, where the O2 is not from molecular oxygen but rather from the carboxyl groups of Krebs cycle intermediates
- > the intermediates in the Krebs cycle generate H+ atoms, most of which are transferred to co enzymes: NAD+ and FAD to form NADH and FADH2
characteristics of the Krebs Cycle
- acetyl group required
- Occurs in mitochondria
- 1 GTP formed which can be converted to 1 ATP
- Occurs in the presence of oxygen
- Produces: 3 NADH, 3 H+, 1 FADH2
- 2 CO2 final product
- intermediates can be used for AA production, but if it’s removed from the KC then it has to be replaced
- provides H+ for OP
Krebs Cycle summary
Acetyl CoA + 3NAD + FAD + GDP + Pi +2H2O - > 2 CO2 + CoA + 3NADH +3H + FADH2 + GTP
- > GTP can give ADP a phosphate to make ATP
Oxidative phosphorilation
- > occurs in the mitochondria
- > basic principle: energy transferred to ATP is derived from energy released when hydrogen ions combine with molecular oxygen to form water
- > oxygen/aerobic conditions required
Which 2 groups of enzymes does OF use to transfer energy from fuel to ATP
- Enzymes that mediate a series of reactions by which H+ ions are transferred to O2 = cytochromes (most contain iron and copper cofactors)
- Enzymes that couple the energy released by the above reactions to the synthesis of ATP
Characteristics of OP
- H+ primary substrate (from Krebs cycle)
- Requires oxygen - in fact, most of the oxygen we breath is used here
- occurs in the inner mitochondrial membrane where the required enzymes are embedded
- 5 molecules of ATP produced from 2HADH + 2H
- 3 molecules of ATP produced from 2FADH2
- final product is H2O and ATP
- Forms majority of ATP
describe how OP forms ATP
- > ATP formed through a series of reactions (electron transfer=electron transport chain) from NADH, H, and FADH2
- > 2 electrons from H atoms are initially transferred from NADH + H or FADH2 (from the krebs cycle) to one of the elements in the electron transport chain
- > 2 electrons are then successively transferred to other compounds in the chain (often to or from iron or copper) until transfer to molecular oxygen which then combines with 2H to form H20
- > transferring H+ to H20 regenerates H+ free forms of the co-enzymes and allows for new reactions to occur
- > at each step, small amounts are released and linked to ATP formation
- > ATP is formed at 3 points in the chain through the chemiosmotic hypothesis
chemiosmotic hypothesis
- > the energy that is released as electrons are transferred is used to move H from the mitochondrial matrix into the compartment between the inner and outer membranes resulting in a H+ gradient
- > at 3 points along the inner membrane, H+ channels form allowing for the influx of H back into the matrix and the transfer of oxygen to ADP +Pi = ATP
- > see page 38 for diagram
Reactive Oxygen Species (ROS)
during electron transfer, highly reactive oxygen derivatives can be formed
- > molecules such as hydrogen peroxide (H2O2) and free radicals such as superoxide (O^2-) and the hydroxyl radical (OH)
- > these reactive oxygen species can cause damage to cells through reactions with proteins and with membrane phospholipids (ROS can “pull” hydrogens off fatty acid tails of membrane phospholipids)
- > cells do not contains the means to deal with theses reactive molecules (free radical scavengers, antioxidants; vitamin E and glutathione)
what systems does our body use for control/communication
endocrine and neural systems
- > they work together and can activate each other
endocrine system
- > consists of glands that secrete hormones
- > activation of gland secretion can be used through a variety of chemical messenger pathways, including neural activation
hormones
chemical messengers carried via the bloodstream
nervous system hierarch
see page 1
components of the control system
- Reflex arc
2. local control
explain the reflex arc
SEE PAGE 2
- > starts with stimulation of receptor cells (either external or internal specialized cells i.e. thermoreceptors, nociceptor, mechanoreceptor)
- > signal that is generated travels up the afferent pathway (neural pathway) to the integrating centre (brain and spinal cord)
- > a response is then sent down the efferent neural pathways to the effector cells (muscle, glands, ect) and a change is effected
- > reflexes include NS and endocrine components
example of a reflex arc
thermoregulation
- > see back of page 2
what is local control, give some examples
- > changes in cell activity due to changes to internal or external environments
- > stimulus results in a response that occurs in the area of the stimulus
- i.e. local skin damage or exercising muscles
- > release of metabolic byproducts + waste signals local increase in blood + oxygen delivery to the exercising muscles
How do chemical messengers and receptors work together for control/system balance
- > system balance is maintained through a variety of feedback mechanisms involving release/secretion of chemical messengers/neurotransmitters and binding of those chemical messengers/neurotransmitters to specific receptors
- > chemical messengers can be ions, molecules, hormones, and neurotransmitters, they can be released from a cell and act locally or travel in the blood to a distant site before activation of a process
- > many chemical messengers can bind to a variety of receptors and will activate different responses depending on the type of receptor found in the effector cell
target cells
cell acted on by a chemical messenger
neurotransmitter
chemical messengers for communication between…
- > nerve cell to nerve cell
- > nerve cell to effector cell
neurohormones
chemical messengers released into the bloodstream by neural cells
paracrine agent and autocrine agents
*both involved in local response
Paracrine
- > chem mess released by cells that act on neighbouring cells. Rapidly broken down by enzymes so do not enter the blood stream
Autocrine
- > chem mess that acts on the cell that released it
* a messenger can be both para and autocrine; acting on neighbouring cells and the cell that released it
ligand
chemical messenger that binds to a specific cell receptor
agonist and antagonist chemical messengers
agonist
- > ligand that binds to a receptor and turns on the receptor and elicits a response (usually distinct from the normal ligand for that receptor)
antagonist
- > ligand that binds to a receptor and blocks the normal response
what is a receptor and some of its characteristics
- > receptors (specific membrane proteins) are a “mechanical switch” turned on by binding/presence of a chemical messenger
- > cells contain many receptors specific for the different chemical messengers
- > a cell response to a chemical messenger increases as the extracellular concentration of the messenger increases and/or the # of receptors increases
- > the cellular response will continue to increase until “saturation” (all the receptors are bound to a messenger)
plasma membrane receptor activation can be through
1st messengers
- > chemical messengers that reach the cell from the extracellular fluid and bind to their specific receptor
2nd messenger
- > substances that enter or are generated in the cytoplasm in response to receptor activation by 1st messengers
how do we regulate receptors
the # of receptors a cell has and the affinity of the receptor for the messenger can be regulated
Down-regulation
- > plas.mem receptor-messenger complexes can be brought into the cell, where it is degraded. Eventually the plas.mem concentration of that receptor decreases and the response associated with that receptor also decreases
Up-regulation
- > # of receptors is increased to try and increase the sensitivity to low concentrations of messengers, i.e. the more receptors a cell has the greater the chance that the messenger will bind to a receptor, initiating a response
characteristics of up/down regulation
- > both up and down regulation can be controlled through protein synthesis since receptors are proteins
- > with down regulation, synthesis of the protein/receptor is slowed or stopped
- > with up regulation, synthesis of the protein/receptor is increased
how are chemical messengers and receptors competitive and specific
see page 5 and 6 for example
define signal transduction
conversion of the signal from the chemical messenger to cellular response
what are the 2 classes of messengers
Lipid(fat) soluble (lipophilic)
- > chemical messengers bind to receptors in cytosol; messenger crosses the membrane lipid bilayer and into the interior of the cell
- > SLOW RESPONSE, takes time to cross barrier
- > i.e. hormone
Lipid-insoluble (lipophobic)
- > chemical messengers that bind to receptors on the plasma membrane
- > receptors are a part of this pathway
- > fast response pathway
classes of lipid-insoluble chemical messengers
Ion channels
Protein kinases
Protein Phosphatases
JAK/STAT
what are ion channels
the simplest mechanism for turning on cellular response; often used for the initiation/transfer of electrical signals
protein kinases
- > transmembrane proteins, where the extracellular side contains the receptor and the intracellular side contains the enzyme(protein kinase) which is activated by the binding of the messenger
- > once enzyme is activated, it can phosphorylate (add P from ATP) cytosolic proteins, plasma membrane proteins and itself