Metabolism: an intro Flashcards
What is metabolism?
Collection of reactions that require reactants and produce products that provide a basis for life
What things affect metabolism?
- part of organism- in multicellular org we have compartmentalisation- so different parts of cell undergo different
metabolic reaction - cell type - nutritional status
- developmental stage/ age
Why are there some general common principles that govern metabolism?
- common evolutionary origin
- All same laws of thermodynamics
What are metabolic pathways
Series of enzymatic reactions that produce specific products- branches and interconnected
What are metabolites
reactants, intermediates and products
Why are enzymes needed?
- Complete reactions in a timely fashion
- Add specificity to reactions (specific complementary active site)
- Allow regulation of pathways- inhibition
Catabolic vs anabolic reactions- which requires energy?
- Can be catabolic (break down) to make simpler molecules and harness free energy released- harnessed in ATP and NADPH
- Catabolic reactions are exothermic (release more energy from making than used by breaking bonds)
- Anabolic- often oxidise the coenzymes (take electrons) onto simple constituents as being built up into more complex compound - require input of free energy- break apart ATP
Outline degradative and biosynthetic pathways
Degradative- often converge on common intermediate e.g. acetyl CoA or pyruvate, further metabolised in Krebs/TCA cycle
-Biosynthetic pathways- few metabolites are the starting point- making many products
Outline where some important reactions in metabolism occur (compartmentalisation)?
- Cytosol- glycolysis, pentose phosphate pathway, fatty acid biosynthesis, many gluconeogenesis reactions
- mitochondrion- citric acid cycle, ETC and oxidative phosphorylation, fatty acid oxidation, amino acid breakdown
Transport systems to move around intermediates
What is the metabolic flux?
Metabolic flux: Direction of gross mass flow of metabolites through a pathway
How do cells control flux
Normally through slowest RDS (with most -ve delta G)
- Short term strategies- allosteric control (coenzymes, reactants, products)- alter structure turning on/off
- Long term control- covalent modification- prosthetic groups , phosphate added (subject to hormonal control), genetic control- change transcription so less/more mRNA produced, reciprocal control varying rates of 2 opposing non-equilibrium reactions
How much energy is recommended/ do we get from each source?
- 2000-3000kcal/day
- Carb and protein 4kcal/g
- Lipid 9kcal/g
- 30% fat 15% protein 55% carb
Digestion of carbohydrates
- majority in diet = polysaccharides
- salivary amylase in mouth to oligosaccharides (tri/disaccharides)
- acidic stomach- stopping action salivary amylase
- Pancreatic amylase- released into small intestine for further digestion
- Final digestion of disaccharides to monosaccharides by enzymes on mucosal cells
- In duodenum glucose taken up by Na transporters in active transport - Found on the brush border of epithelial cells= moved into circulatory system
- Via portal circulation flushed through liver- role in detoxification
Explain some properties of glucose
- Most abundant carbohydrate C6H12O6 L and D enantiomers (stereoisomers) Humans stored as insoluble glycogen, in plants as starch Comes from diet or body stores a and b form (ABBA) In solution- not linear forms 6 membered ring- pyranose 5 C rings are called furanose
How are glucose levels controlled?
- major carb transported in blood
- Levels controlled by hormones secreted by pancreas (insulin and glucagon)
Ideal conc 5mM
Required by brain (preferred substrate) and erythrocytes