Metabolism Flashcards
What’s the significance for biological systems of the first law of thermodynamics?
Living organisms can convert chemical energy into mechanical energy and heat, but cannot destroy it.
- Thus, excess energy intake can only be stored as fat.
What are the units of energy?
Joule, but usually expressed as MJ or kJ
How can you measure the energy content of foods?
- Inc. steps taken to do this
By oxidising food samples in a bomb calorimeter.
- A measured amount of dry food is placed inside the calorimeter in an atmosphere of oxygen, and ignited
- The amount of heat released is measured by the increase in temperature of the water jacket and thus the heat of combustion is calculated
What are the Atwater Factors of the 4 fuel sources?
- Fat = 38kJ/g
- Carbohydrate = 17kJ/g
- Protein = 17kJ/g
- Ethanol = 29kJ/g
What are the 2 ways of measuring energy expenditure?
- How do they work?
- What do they use?
- Direct calorimetry
- Relies on measuring heat output from a person in a whole-body calorimeter - Indirect calorimetry
- Based on Oxygen consumption and CO2 Production
(certain amount of energy associated with every litre of O2 consumed)
- Measured using a respirometer
- Can calculate RER
What is RER?
- Equation
- Allows determination of?
- RER of carbs and fatty acids
- Respiratory exchange ratio
- CO2 produced / O2 consumed
- Allows determination of which fuel the body is using
- Carbs: RER = 1
- Fatty acids: RER = 0.7
What is basal metabolism?
What does it differs b/w individuals depending on?
- Energy required for maintenance of life; energy expenditure at rest
- Differs b/w individuals depending on:
Gender
Age
Body size/composition
Genetics
Hormonal status
Stress levels
Disease status
Certain drugs
Factors affecting basal metabolism?
Increased by: - Athletic training - Late pregnancy - Fever - Drugs (e.g. caffeine) - Hyperthyroidism Decreased by: - Malnutrition - Sleep - Drugs (i.e. B-blockers) - Hypothyroidism
Function of salivary glands
Produce saliva, which contains mucous and amylase which STARTS THE DIGESTION of CARBOHYDRATES
Functions of the stomach
- incl. what it secretes
- Storage and mixing of food w/ gastric juices
- Slow release of chyme into intestine
- Secretes acid (denaturing), pepsinogen (protein digestion) and mucous (protection)
Function of the pancreas
Secretes most digestive enzymes, incl. amylase, lipase, proteases
Function of the liver
Synthesis of bile salts/acids important for fat digestion
Function of small intestine
Final stage of digestion and absorption
2 general phases of digestion
- Hydrolysis of bonds connecting monomer units in food macromolecules (glycosidic, peptide, ester)
- Absorption of products from gut into body
Carbohydrate digestion process
- Intake of carbohydrates
- Salivary amylase catalyses the hydrolysis of the glycosidic bonds
- Pancreatic amylase completes the digestion of the starch molecule
- Enzymes hydrolyse disaccharides into monosaccharides (in SI) to be absorbed by intestinal epithelial cells
- Maltose and isomaltose —> glucose x2
- Sucrose —> glucose + fructose
- Lactose —> glucose + galactose - Fibre is excreted as faeces
Carbohydrate absorption process
- Glucose is absorbed through apical surface via symport with Na+ (secondary active transport)
- Glucose moves through basal membrane via facilitative transporter (conc. gradient)
The intracellular conc. of Na+ is kept low by Na+/K+ ATPase
Lactose intolerance:
- What is it?
- Caused by?
- What does it cause? why?
- How to manage
- Disorder affecting carbohydrate digestion
- Caused by a lactase deficiency
- Causes bloating, flatulence and diarrhoea, due to fermentation of lactose by intestinal bacteria
- Need to avoid lactose in diet
Coeliac Disease:
- What is it?
- Where in the body does it affect?
- Cause?
- Symptoms?
- Disorder affecting carbohydrate digestion
- SI
- Body reacts against gluten (wheat protein); antibodies react w/ transglutaminase; villi flattened, nutrients not absorbed
- GI symptoms (variable)
Why do we need dietary protein?
- Supplies AAs to make body proteins
- Source if Nitrogen for purines, pyrimidines and haem
- C skeletons can be used as fuel
General function of GI hormones
Control the secretion of digestive enzymes
What are the 3 main GI hormones and their function?
- Gastrin - stimulates the secretion of gastric juices
- Secretin - stimulates secretion of alkaline bile and pancreatic fluids (bicarbonate)
- Cholecystokinin (CCK) - stimulates the release of pancreatic enzymes and release of bile from the gallbladder
What is protease specificity determined by?
In terms of hydrolysis of proteins
AA side chains
Endopeptidases vs exopeptidases
Endo- attack peptide bonds w/in the peptide chain
Exo- attack peptide bonds at the end of the chain
Pepsin
- What is it
- Source
- Substrate
- Site of action
- Endopeptidase or exopeptidase?
- Enzyme involved in protein digestion
- Stomach
- Proteins and pepsinogen
- Stomach
- Endo
Trypsin
- What is it
- Source
- Substrate
- Site of action
- Endopeptidase or exopeptidase?
- Enzyme involved in protein digestion
- Pancreas
- Polypeptides, chymotrypsin
- SI
- Endo
Chymotrypsin
- What is it
- Source
- Substrate
- Site of action
- Endopeptidase or exopeptidase?
- Enzyme involved in protein digestion
- Pancreas
- Polypeptides
- SI
- Endo
Carboxypeptidase
- What is it
- Source
- Substrate
- Site of action
- Endopeptidase or exopeptidase?
- Enzyme involved in protein digestion
- Pancreas
- Polypeptides
- SI
- Exo
Aminopeptidase
- What is it
- Source
- Substrate
- Site of action
- Endopeptidase or exopeptidase?
- Enzyme involved in protein digestion
- SI
- Polypeptides
- SI
- Exo
Dipeptidase
- What is it
- Source
- Substrate
- Site of action
- Enzyme involved in protein digestion
- SI
- Dipeptides
- SI
Protein digestion process
- Protein —> peptides in stomach (via HCl + pepsin)
- Peptides —> di- and tripeptides + AAs in SI (via digestive enzymes: trypsinogen, chymotrypsinogen, carboxypeptidases, aminopeptidases)
- Di- and tripeptides —> AAs in SI (via di- and tripeptidases)
- AAs cross intestinal epithelial cells and move into blood
Absorption of AAs
- Absorption thr’ apical membrane of SI by Na+ dependent carriers (symport)
- AA absorption thr’ basal membrane (into portal vein) via facilitated transporter
Intracellular Na+ levels kept low via Na+/K+ ATPase
Cystic fibrosis
- What is it
- What does it cause?
- Leads to?
- Disorder affecting protein digestion
- Causes thick mucous secretions which block the pancreatic duct and thus the secretion of pancreatic enzymes
- Leads to malabsorption
Coeliac disease
- What is it
- How is it caused?
- Leads to?
- Disorder affecting protein digestion
- Body reacts against wheat protein bc antibodies react w/ transglutaminase
- Flattened villi —> malabsorption
Process of nucleic acid digestion
- DNA + RNA undergo acid hydrolysis in the stomach
- Intestinal nucleases hydrolyse the phosphodiester bonds b/w nucleotides
- Individual nucleosides absorbed via nucleoside transporters
Main classes of dietary lipids
- TAG
- Phospholipids
- Cholesterol
Bile acids
- What do they do?
- How do they do this?
- What structural feature allows them to do this?
- Emulsify fats
- Forms micelles w/ TAGs to increase SA for digestion
- Have a hydrophobic side (facing inside micelle) and hydrophilic side (facing outside micelle)
Role of pancreatic lipase/how it does it
- Also what does this allow?
- Within micelle: hydrolyses fatty acids at positions 1 + 3 of glycerol backbone to break down TAGs —> fatty acids + monoacylglycerol + cholesterol
- Smaller micelles formed (w/ bile salts), which can be absorbed across intestinal cell membrane
Process of Micelle/lipid absorption
- Micelles absorbed across intestinal membrane; release contents into cell
- MAG + ffa transported to ER, where they’re resynthesised into TAGs and cholesterol esters
- TAGs + other lipids combine w/ apoB in ER to form chylomicrons
- Chylomicrons secreted from intestinal cells entering the bloodstream via the lymphatic system
What does Xenical do? How?
- Inhibits pancreatic lipase by interacting w/ the OH group in its active site —> leads to inactivation bc can’t hydrolyse fatty acids
- Mimicks a TAG molecule
4 Main classes of lipoproteins
- What do they solubilise?
- Chylomicrons (high lipid:protein ratio)
- VLDL
- LDL
- HDL (low lipid:protein ratio)
solubilise lipids for transport
Functions of apoproteins
- Structural for assembly of lipoproteins (apoB)
- Ligands for cell surface receptors (apoE + apoB)
- Enzyme cofactors (apoCII for lipoprotein lipase)
What are the 2 lipid transport pathways? What type of fat do they transport?
- Exogenous chylomicron pathway - dietary fat
2. Endogenous VLDL/LDL pathway - endogenously synthesised fat
What apoprotein activates lipoprotein lipase?
apoCII
Familial Hypercholesterolemia (FH)
- What is it
- Caused by?
- Leads to?
- Treated with?
- Common form of hyperlipidaemia, which leads to premature atherosclerosis
- Caused by a defect in LDL receptor gene
- Leads to LDL build up in the blood
- Treated w/ statins, which lower LDL
Key characteristics of vitamins
- “vital to life”
- Essential, individual, ORGANIC molecules
- Don’t provide energy when broken down
- If absent/low in the diet –> symptoms of deficiency
- Required in the diet in small amounts (mg or µg)
What is bioavailability?
Amount absorbed and used
What are the 4 components used to ascertain if someone is consuming enough vitamins/minerals to meet their requirements?
- Clinical examination - look for symptoms
- Anthropometry - energy balance/growth
- Biochemical tests
- Dietary assessment (compare nutrient intake w/ Nutrient Reference Values)
Roles of vitamins
- Coenzymes: allow metabolic reactions to occur (transport molecules)
- Cofactors: allow metabolic reactions to occur (directly participate/assist in catalysis)
- Other roles:
Structural
Antioxidants
DNA/RNA
Thiamin - role? - Deficiency Causes Diseases
- Part of coenzyme; role in nerve cells and converting pyruvate —> acetyl-CoA
- Glucose can’t be converted into energy; increased pyruvate and lactate (vasodilators)
- -> Beriberi (heart failure due to venous pooling)
- -> Wernicke-Korsakoff (cerebral beriberi + psychosis)
Characteristics of minerals
- Essential NON-ORGANIC elements
- Don’t provide energy
- If absent or low in the diet, symptoms of deficiency MAY appear
- Required in the diet in small amounts (mg or µg)
Minerals vs. trace elements
Minerals: >5g in the body
Trace elements: <5g in the body
Roles of minerals
- Cofactors
- Structural role (hydroxyapatite crystal)
- Key constituent of molecules (i.e. Fe)
- Transfer of electrons (redox reactions)
- Nerve impulse + muscle contraction
- Fluid + electrolyte balance
Why do we need Mg? (i.e. roles)
- Cofactor for >300 enzymes involved in cellular processes
- Stabilises proteins, nucleic acids, membranes
- Bone metabolism + remodelling
- Nerve impulse + muscle contraction
Why do we need Selenium? (i.e. roles)
- Antioxidant (works w/ vitamin E)
- Cofactor for other enzymes (e.g. thyroid hormone)
2 diseases caused by Selenium deficiency
- Occurs in who?
- Caused by?
- White muscle disease
- occurs in pasture-fed animals
- low levels of Selenium in soils - Keshan’s disease
- Humans develop cardiomyopathy
- Influenced by diet
Why is ATP a central energy intermediate?
Bc energy from energy-releasing reactions is converted to ATP and can subsequently used to drive energy-requiring reactions
What does Gibbs free energy tell us about a reaction?
The amount of work that can be done (+ve △G) or that is required (-ve △G)
What is energy coupling?
When an energetically favourable reaction drives an energetically unfavourable reaction by making the overall △G -ve.