Mehcanobiology Flashcards

1
Q

What is mechanobiology?

A

Study of how physical forces changes in cell or tissue mechanics contribute to development, physiology and disease

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2
Q

What is mechanotransuction?

A

Conversion of a physical force to a biochemical response

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3
Q

What is mechanosensing?

A

When a protein or cellular structure responds to a physical cue to initiate mechanotransduction

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4
Q

What is are the steps building up to cellular response and their components?

A
  1. Mechanosensing: Adhesion receptors, membrane proteins/signalling
  2. Signal transduction: often along cytoskeleton
  3. Signal integration at nucleus: Chromatin rearrangement, nuclear pore opening
  4. Cellular response: Cell shape, fate, motility, growth
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5
Q

What is an example of mechanotransduction?

A
  • Arteries increase with blood flow but capillaries cant cope so muscles contract to constrict the diameter again
  • Cytoskeleton cell shape changes with fluid flow because cells counteract force that fluid flow is exerting
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6
Q

Describe the components of lung on a chip

A
  • Mimic lungs on mechanical and cellular level
  • Has fluid and air flow
  • It has epithelial cells and flexible membranes with many channels
  • Artificial membrane which contains small pores and the endothelium which mimics the blood vessels
  • Vacuum on left and right side of the air/blood chamber, vacuum can be applied, stretched and released to reinact breathing
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7
Q

How is lung on a chip used to study lung inflammation?

A
  • TNF is a cytokine involved in lung inflammation
  • Once added, it can be seen that neutrophils get stuck to the endothelial layer due to the upregulation of adhesion receptors
  • They migrate towards the epithelial layer over time through pores
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8
Q

How is lung on a chip used to study lung infection?

A
  • Adding E.coli on the epithelial layer
  • Bacteria secretes factors inducing TNF
  • Leads to neutrophils being accumulated
  • Neutrophil migration through endothelial and epithelial layer and engulfs the bacteria
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9
Q

What is a neutrophil?

A

A type of white blood cell involved in the immune systems response to inflammation and infection

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10
Q

How is lung on a chip used to study mechanical stretching as a result of nanoparticles?

A
  • Gas particles applied within air channel of lungs
  • These particles initiate inflammatory response: adhesion of neutrophils, immobilisation etc.
  • Mechanical stretching mimics the breathing
  • See an increase in iCAM1 expression which is involved in facilitating the adhesion of immune cells in the inflammatory response
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11
Q

Why are organ on chip experiments good?

A
  • Can be used to reduce animal experiments as human cells can be used on the chip
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12
Q

What is the equation for stress?

A

Force/Area
(Pa)

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13
Q

What is the equation for strain?

A

Change in length/ Original length
No units

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14
Q

What is the equation for stiffness?

A

Stress/Strain
(kPa)
- Plotting stress against strain can give u info about the defined properties of a material

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15
Q

Give some examples of soft, intermediate and stiff tissues in the body

A

Soft: Brain, breast
Intermediate: Liver, Kidney, Lung
Stiff: Cartilage, bone

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16
Q

How can stiffness be measured?

A

By indentation, looking at the force applied and the depth of indentation into plastic

17
Q

How is stiffness relevant in differentiation?

A
  • Human stem cells can develop into bone, muscle and brain cells
    -Stiffness can steer differentiate
  • When generating stem cells, provides information that neurons for example need a softer surface than plastic for in vitro experiments
18
Q

How can ultrasounds be used to measure the stiffness of organs?

A
  • Looks at speed of sound and how fast its being transmitted which is proportional to stiffness
  • Non invasive
19
Q

Give examples of two diseases where there is increased stiffness in the organs

A
  • Fibrotic diseased liver
  • Chronic liver disease
20
Q

How is cancer associated with tissue stiffening ?

A
  • Lump like structures often detected by the patients
  • Tumour tissue is stiffer than surrounding healthy tissue
  • Stiffness can go up to 8kPa
  • Tumour is exerting force on to adjacent healthy tissue, modifying the healthy tissue
21
Q

Why is a tumour stiffer than a normal cell? LEARN

A
  • Cells more tightly packed
  • Tumour cells and fibroblasts (tumour-activating) are excreting much more extracellular matrix than normal *
    Cross-linking of ECM*
    Desnity of tumour cell *
22
Q

What mechanosensors detect pressure in the cell?

A
  1. Piezo channels
  2. Integrins
  3. Caveolae
23
Q

How do piezo channels work?

A
  • Ion channels which respond to stretch (mechosensitive)
  • When lateral tension to the membrane is applied (pulled on either side) pore opens leading to the influx of extracellular Ca2+ and transducing mechanical signals into electrical and chemical signals in the cell.
  • actin filaments is what pulls the membrane
  • F-actin facilitates opening of the pore
24
Q

How do integrins work?

A
  • Mechanoreceptor, transmembrane, links cells with the ECM
  • Activated through ‘inside out’ signalling, phosphorylation on the inside signals for integrins to engage with the ECM
  • F-actin connects to integrins through Talin and Vinculin
  • Vinculin binds when the actin-myosin (connected to integrins through talin) applies a force and pulls, unfolding a binding site for vinculin enhacing the F-actin connection
  • So integrins connect with intracellular matrix (F-actin) on one side and ECM on the other
25
How do caveolae work?
- Small invagination on the plasma membrane - Lateral tension applied so the caveolae flattens out - Caveolae links to stress fibres and actin cytoskeleton - This causes Cavin molecules attached on the intracellular side to detach and go on for further downstream signalling processes
26
How is actin and myosin contraction regulated and why is it important?
- Activation of Rho (GTPase) - Interacts with Rho dependent kinase - This phosphorylates the myosin light chain - Contraction occurs - Regulation is essential for changing cell shape, cell migration etc.
27
What transcription factor is involved in epithelial to mesenchymal transition?
- SNAIL - e.g. in the process of epithelial to mesenchymal in cancer cells, SNAIL appears
28
What two enzymes when dysregulated play a role in cancer, particularly in cancer invasion?
LOXL2 and MMPs - Contribute to the remodelling of the ECM, facilitating tissue remodelling which cancer cells need to invade
29
What is the role of the hippo pathway?
Regulating: - Cell proliferation - Apoptosis - Organ size Dysregulation can be implicated in cancer
30
How is the size of an organ regulated?
- LATS1 (kinase) is activated by Mst1/2 (kinase) - YAP/TAZ is phosphorylated by LATS1/2 at ps127 (a serine amino acid) - 14-3-3 protein binds to YAP/TAZ meaning it cannot enter the nucleus, stays in cytosol - When 14-3-3 is removed, cytoplasmic retention stops and YAP/TAZ can enter the nucleus and bind to DNA as a transcriptional regulator
31
What factors cause YAP to be localised in the nucleus?
- Large cell area, Stiff ECM, Higher contractile forces This leads to process such as cell proliferation, cell growth and the formation of osteoblasts
32
What factors cause YAP to be localised in the cytosol?
Smaller cell adhesion area, soft ECM and lower contractile forces Leads to processes such as growth arrest