MD1: SAR of B-Agonists & Antimuscarinics Flashcards
what do salbutamol and ipratropium treat
symptoms of asthma and chronic obstructive pulmonary disease
what does COPD stand for
chronic obstructive pulmonary disease
what is the duration of onset of salbutamol
short-term relief due to short onset
what is the duration of onset for ipratropium
short-term relief due to short onset
what are two examples of short duration of action bronchodilators
salbutamol, ipratropium
what modifications can be made to convert lead compounds into selective agonists or antagonists
chain extension, conformational restriction, group shifting, chiral switching
where are lead compounds found
natural receptor ligands like acetylcholine and noradrenaline collections of synthetic compounds existing drugs natural products like muscarine computer aided rational design
what are the features of the SAR on acetylcholine
the ester group (acetyl)
the nitrogen group (choline)
CH2-CH2 between ester and nitrogen group is needed
what structural features would not be tolerated when considering the SAR of acetylcholine
large esters
CMe3 instead of NMe3
what are the overall conclusions of SAR for acetylcholine
tight fit between ACh and receptor binding site (little scope for variation)
methyl groups fit into small hydrophobic pockets
ester inteacts by hydrogen bonding
quaternary nitrogen interacts by ionic bonding
how many variations of ACh are there
many
due to several freely rotatable single bonds
what are the two types of cholinergic receptor
nicotinic and muscarinic
what type of activity do cholinergic receptor types have
agonist
where are the receptors located that nicotine works on
cholinergic receptors at nerve synapses and skeletal muscle
where are the receptors located that L+-muscarine works on
cholinergic receptors on smooth and cardiac muscle
why are muscarine and nicotine rigid ACh analogues
the rotatable bonds of ACh are locked within a ring which restricts the number of possible conformations
this defines the separation of the ester and nitrogen in pharmacophores
what are the natural product leads in the development of cholinergic antagonists (muscarine)
atropine and hyoscine
what are the important binding groups in atropine and acetylcholine
amine and ester groups use ionic and H-bonding
the position of these groups is similar in both molecules
what group in atropine and acetylcholine needs to be protonated when bound to a receptor
nitrogen
how does atropine bind to receptors
the aromatic ring is an extra binding group (Van der Waals)
it binds with a different induced fit with no activation and is larger than ACh
it binds more strongly than ACh