Mass Spectroscopy Flashcards

1
Q

What is the definition of mass spec?

A

a technique used to measure the relative mass of molecules which requires the generation of analyte ions followed by ion detection and mass analysis

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2
Q

What are the major areas of application of Mass Spectrometry?

A

verification of drug identity, confirming presence of particular drug in formulated products, verifying presence of drug in clinical samples, identifying unknown drug metabolites, quality control of recombinant proteins, helps in sequencing of proteins, peptides etc and used in drug discovery

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3
Q

What are the principles and processes involved in MS?

A

molecules of sample ionized then identified according to mass, mass spectrum is a plot of intensity against mass to charge ratio, mass spectrometer is a device for producing and weighing ions

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4
Q

What are the key stages in performing experiments?

A

sample vaporization, ion generation, ion separation according to m/z ratios and ion detection

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5
Q

How can sample volatilization/ vaporization be achieved?

A

heat, placing sample in a vacuum or using fast atom bombardment

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6
Q

What are some ionisation techniques?

A

electron impact ionisation, matrix assisted laser desorption ionisation, atmospheric pressure chemical ionisation, fast atom bombardment, electroscopy ionisation and chemical ionisation

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7
Q

What are the components of a mass spectrometer?

A

vacuum chamber, ionisation chamber, magnetic sector, detector

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8
Q

Describe the method of electron impact ionisation

A

sample is vapourised by heat, ionisation achieved by bombarding volatilized molecules with electron beam, positive fragments produced are accelerated under vacuum through a magnetic field into deflection chamber

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9
Q

Describe the method of chemical ionisation

A

a stream of electrons used to ionize a reagent gas (ammonia or methane), results in production of strong acid , results in generation of protonated ions

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10
Q

What are some adv and disadv of EI and CI?

A

cheap and easy but produce a lot of fragments

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11
Q

Describe the process of fast atom bombardment

A

an analyte sample suspended in a viscous matrix is bombarded with a beam of fast moving Xe atoms , energy transfer from Xe atoms to matrix, break IM bonds and ionisation, desorption of analyte ions into the gas phase

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12
Q

What is the importance of the matrix in fast atom bombardment?

A

helps protect analyte from fragmentation, without it direct bombardment would lead to extensive fragmentation

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13
Q

1Describe the process of electrospray ionisation

A

soft ionisation technique which proceeds via protonation or deprotonation mechanism, analyte dissolved in mixture of org solvents, pH modifier used to produce ion

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14
Q

What is atmospheric pressure chemical ionisation?

A

similar to ESI but the gas phase ionisation is more effective than ESI for analyzing less polar species

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15
Q

What are the differences between matrix assistant laser desorption and fast atom bombardment?

A

the energy beam is transferred to matrix from a laser beam and the matrix must have a chromophore absorbing energy at wavelength of laser

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16
Q

What are some useful rules of fragmentation concerning alkenes, branched hydrocarbons, branched alkenes, carbonyls etc?

A

Simple alkenes undergo fragmentation by initial loss of a methyl group, branched hydrocarbons form more stable secondary and tertiary carbocations, in branched chain alkenes fragmentation occurs next to branch site, for molecules containing heteroatoms a common fragmentation is the cleavage of alpha/beta bond, predominate cleavage in aldehydes and ketones is loss of one of the side chains to generate substituted oxide ion

17
Q

How do you deduct structural information from a mass spectra?

A

find out whether molecular ion has the same mass as expected, figure out whether the pattern correspond with structural elements of the molecule, work backwards, measure mass of fragments and reconstruct

18
Q

How is a mass spectra presented?

A

relative abundance % vs m/z ratio