LSCI 230 Final Flashcards
Name 3 criteria of classification of phenetic taxonomy
- All characteristics should be considered of equal importance (unbiased).
- Organisms should be grouped based on overall similarity.
– Classification should be based on as many features as possible.
How are similarities between pairs of microorganisms calculated and expressed?
similarity coefficient (S)
Jaccard coefficient (SJ)
what is a mutation?
change in genome
Most genetic changes are?
neutral
What is the role of adaptive mutations?
improve fitness of an organism, increasing survival in its
environment.
WHat is the role of silent mutations?
may be beneficial in other environments allowing the microorganism to
colonize new niches.
Are deleterious mutations lost?
yes
What does the accumulation of mutations lead to?
speciation
What did Carl Woese do ?
– Sequencing of the small subunit rRNA (SSU rRNA): 16S rRNA in prokaryotes, 18S rRNA in eukaryotes.– Established the presence of three domains of life:
Bacteria, Archaea, and Eukarya– Provided a unified phylogenetic framework for Bacteria
What does comparative r RNA sequencing involve?
– Amplification of the gene encoding SSU rRNA
– Sequencing of the amplified gene
– Analysis of sequence in reference to other sequences
What is rRNA sequencing used for?
infer the phylogeny of prokaryotes and other microorganisms.
What is the evolutionary relationship between two organisms directly correlated to?
the number of mutations in each one
Are two organisms closely related or not if there are few differences?
closely related
NAme 2 charcateristic of streptomyces
hyphal growth
produce spores at tip of elevated sprorophore
NAme a filamentous actinobacteria?
streptomyces
Name a predatory bacteria
bdellovibrio
Where does bdellovibrio acquire nutrients from?
host cells
which kind of bacteria does bdellovibrio infect?
GRAM NAGATIVE
Name a stalked bacteria?
caulobacter
Name the 2 types of caulobacter
stalked mother cell
flagellated daughter cell
What does the stalk of caulobacter secrete
stickiest substance known
Name an obligate intracellular bacteria
chlamydia
What is an elementary body of chlamydia?
infectious, releases from host cell
What is a reticulate body of chlamydia
intracellular, active growth