Log P, Log D, pka, pH Flashcards

1
Q

What is pH a measure of?

A

H+ ion concentration = -log[H+]

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2
Q

Ka (meaning of large value?) and pKa

A

Ka = acid dissociation constant = [product]/[reactant].
Measure of strength of acid in solution
Large means products of dissociation is favoured
= strong acid
pKa = -logKa

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3
Q
  1. what does a high pKa for base mean?

2. what does high pKa for acid mean?

A
  1. high pKa base = strong base

2. high pKa acid = weak acid

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4
Q

Weak Acids

  1. pKa < pH of environment?
  2. pKa > pH of environment?
A

Weak Acids

  1. conjugate base (anion) form predominates
  2. environment is acidic so acidic (neutral) form predominates
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5
Q

Weak Bases

  1. pKa < pH of environment?
  2. pKa >pH of environment?
A
  1. environment basic (neutral) form predominates
  2. environment acidic (cation) predominates
    weak bases tend to be absorbed in basic environments e.g. duodenum
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6
Q

Phenol pKa value and what this means for dissociation?

A

pKa=10
Ka= 10^-10 (acid dissociation constant)
Therefore 1 in every 10,000000000 molecules is dissociated

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7
Q

What is P and log P? What does it’s values mean?

A

log P = partition coefficient = a measure of lipophilicity in unionised form
P = [Co]/[Cw]
log p >0 = lipophilic
log p < 0 = hydrophilic

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8
Q

ionisation relation to solubility

A

ionisation increases hydrophilicity therefore solubility

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9
Q

hydrophobic groups - give 4 examples.

A

-CnHn- -Cl - Br - I

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10
Q

hydrophilic - give 2

A

COO- NH3+

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11
Q

log D
Positive?
log D = 2, meaning?

A
distribution coefficient
takes into account ionised and unionised
pH dependent and always less than log P 
\+ve means distribution in oil layer
log D = 2, D = 100/1 = distribution in to 100x more lipid than water so lipophilic
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12
Q

log D equation

A

log D = log P + log Funionised

Funionised ACID = 1/(1+10^pH-pKa)

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13
Q

Multiple ionisable groups

A

log D must be calculated for all ionisable groups

Only +ve log D for all groups means absorption

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14
Q

pH of stomach?

small intestine?

A

2

8

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15
Q

pv = nrt

A

pressure x vol=no moles of gas x r x temp (kelvin)

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16
Q

+ve log D at pH with high bioavailability explanation?

A

Small intestine - massive surface area, absorption is favoured.
log D does not account for first pass

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17
Q

TPSA of well absorbed drugs threshold?

TPSA of BBB threshold?

A

<130 A^2 well-absorbed

<80A^2

18
Q

Depot drug for monthly IM injections compared to oral daily?

A

log P increased so drug is retained in carrier and released slower

19
Q

Why is one enantiomer more pharmacologically active than the other?

A

Ligand is chiral so stereoisomer binds with higher affinity

20
Q

Advantages of salt administration?

Unionised/ionised?

A

Only hydrophilic form can dissolute in GI fluid generating single molecular entities for absorption across GIT cells.
Lipophilic = unionised -> absorbed

21
Q

Bioavailability predicted by?

A

fraction absorbed from GIT but also first pass metabolism (amount in hepatic portal vein)

22
Q
Which parameters influence amount filtered at Bowman's capsule?
i = TPSA 36.3
ii = pKa = 8.9
iii = log P = 3.5
iv = oral F = 80%
v = 80% plasma protein bound
vi = V = 12 L/kg
A

v an vi = plasma protein determines how much free drug will be filtered. Bound drug cannot be removed

V determines how much is in blood. If drug is extensively distributed in tissues then the kidneys cannot access it

23
Q
What health conditions could affect these parameters?
i = TPSA 36.3
ii = pKa = 8.9
iii = log P = 3.5
iv = oral F = 80%
v = 80% plasma protein bound
vi = V = 12 L/kg
A

Renal failure
Obesity
Age
Hypoproteinemia

24
Q
Half life of citalopram is 36 hours, why does it have a relatively long half life
i = TPSA 36.3
ii = pKa = 8.9
iii = log P = 3.5
iv = oral F = 80%
v = 80% plasma protein bound
vi = V = 12 L/kg
A

V>0.7l/kg is very extensively distributed, heavily sequestered by tissues and fat. Organs slowly access for removal.

Kidney filtrate is also generally reabsorbed

25
Oxidative N-dealkylation | N- Ch3 - Ch3 becomes?
N - Ch3 -OH
26
What structural features of citalopram prevent CYP 450 aromatic oxidation?
Aromatic oxidation by CYP450 requires removal of a H and replacement of an OH from and ELECTRON RICH PHENYL RING NITRILE = electron withdrawing therefore deactivates one ring towards aromatic oxidation F = electron withdrawing " ". P450 cannot break CF to replace with OH so if F is where position is normally hydroxylated it will block the process
27
H bond donor and acceptors?
``` Donor = H Acceptor = O ```
28
What does an acid + base = ?
Salt + water
29
1.Typical salts of: Basic compounds? Acidic? 2.Applications of salts?
HCl salts of basic Na, K, Ca 2. enable drug to be dissolved in small amount of water in IV aqueous forms enable oral bioavailability and increase dissolution rate
30
Lipinski rule of 5
no more than 5 H bond donors (H ions) no more than 10 H bond acceptors (O molecules) MW<500 DA log P < 5
31
optimal log D and TPSA?
log D 1-3 and TPSA < 130
32
Drugs not suitable for oral administration
Phenolic and catecholic groups and anti anginal nitrates
33
how to overcome reactivity with nucleophiles?
delocalise lone pair of electrons
34
Poor aqueous solubility 2 points
no salt forming groups | planar, aromatic - stacking in solid state slowing dissolution
35
What does Zinc metalloprotease function as?
Increased nucleophilicity of Cys Thiol group (farnesyl transferase inhibitors)
36
Peptide bonds increase susceptibility?
polar therefore can be hydrolysed by peptidases
37
functional groups imrove drug mainly through?
improved affinity for binding site halogens lipophilic and block oxidation hydrophilic groups often promote phase II metabolism and renal excretion
38
Phases of drug metabolism and their functions
Phase I - introduce or unmask hydrophilic group (functionalisations) Phase II - conjugate drug or its metabolite with a hydrophilic, endogenous species (conjugation) e.g. glucoronide, sulfate, amino acid BOTH AIM TO PRODUCE A MORE WATER SOLUBLE SPECIES
39
How does urine aid excretion of basic drugs?
acidification which reduces reabsorption from DCT
40
Oxidation- two types?
hydroxylation = incorporation of O into molecule | oxidative deamination, N or O-dealkylation = loss of part of the molecule with O added to lost alkyl
41
CYP 450 - electron donor/acceptor?
acceptor