Lecture Gulmez Flashcards

1
Q

Fear learning and extinction

A
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2
Q

Learning objectives

A
  • Describe how fear memory can be bahaviorally analyzed in animals
  • Describe neural representations of memories in the brain
  • Explain how neural activity can be assessed in mice across different experimental conditions (freely moving, living animal vs post-mortem analysis), and how these methods can be used to answer specific research questions
  • Contextual fear conditioning (maybe more interest in hippocampus): test triggers fear response
  • Tone test (novel context, odor, floor) (more interest in auditory cortex to amygdala projections) –> pre-tone vs post-tone freezing shows fear response ( sometimes the frequency of the tone can have a different effect)
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3
Q

Fear

A
  • emotional response that follows an aversive experience such as threat or danger

–> novel stimuli
- novelty
- ambiguity
- uncertainty

one of oldest and strongest responses as it is beneficial for survival (prepares for future threats as you remember better)

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4
Q

Fear learning - classical (Pavlovian) conditioning

A

Conditioned stimulus (CS): tone or light

Unconditioned stimulus (US): footshock

results in generalized fear to CS (increased freezing behavior by the end of the training)

During fear expression test there is no more foodshock, but fear response is still showed upon conditioned stimulus

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5
Q

Fear potentiated startle

A

Day 1: classical pavlovian fear conditioning

Day 2: animals hear auditory cue (they show fear response)

then they see light again and effect of tone is amplified (fear response is amplified - association)

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6
Q

Fear learning- Freezing chambers

A

Training:

White light
Background noise (optional)
Odor
Flat shock grid

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7
Q

Fear learning - operant conditioning

A

instrumental (operant) conditioning –> behavioral response paired with CS (reward or punishment)

lever pressing –> reward (increase in behavior - reinforcement)

lever pressing –> punishment (decrease in behavior - avoidance)

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8
Q

Fear extinction

A
  • fear conditioning (association) e.g. tone, box and shock
  • fear MEMORY recall
  • extinction training (associated cue, but without footshock (you see an extinction of the fear response) –> exposure therapy
  • extinction retention
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9
Q

Theories on fear extinction

A

A NEW INHIBITORY LEARNING

  • currently general consensus
  • competes with and suppresses the fear memory rather than erasing it

Evidence:

Behavioral evidence:
- Fear can reemerge

Neuronal evidence:
- Fear and extinction learnings activate different brain networks (not same but opposite directions)

  • Extinction triggers neural signaling pathways similar to memory acquisition

ERASURE OR UNLEARNING OF CONDITIONED FEAR

Original fear memory is de-potentiated and eventually removed

  • Neural evidence:

Extinction learning triggers reversal of fear induced synaptic potentiation in the amygdala

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10
Q

Return of fear

A

a relapse of fear can happen–> Extinction recall

  • reminder of shock, the fear response even amplifies compared to before
  • Extinction is context dependent (problem in exposure therapy, where extinction might be associated only with that concrete setting)
  • Passing of time (spontaneous recovery of the fear)

(??) a new CS-US pairing –> re-learn - different tone or light but strong response

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11
Q

Neuronal circuits of fear and extinction memory

A
  1. Medial prefrontal cortex (mPFC) - executive functions
  • Prelimbic area: fear
  • Infralimbic area: extinction
  1. Amygdala - fear center
  2. Hippocampus - spatial navigation and episodic memory

Homologous regions exist in rodent brains

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12
Q

Memory engrams (physical memory representations in the brain)

A

Neurons activated during learning and recall
Building blocks of memories in the brain

In each brain region there is only a subset of neurons activated
——————————————————————Activated during LEARNING

During memory CONSOLIDATION Synaptic plasticity is potentiated, connectivity with each other, increased spine density, changes on transcriptional and epigenetic level

In RECALL the same subset of neurons is reactivated

triggering these neurons leads to fear response, but inactivating these neurons leads to NO fear response even if animals are in fear context

Long-lasting physical changes

Semon (1859-1918)

  • Persistence
  • Can be awaken by cues
  • Content
  • Dormancy

At diffent scales

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13
Q

Tools to label activated neurons in vivo

A

4 levels:

Temporal control - How to label activated neurons within a certain time window

Transgene delivery - How to deliver these synthetic constructs

Spatial control - How to selectively label activated neurons, but not others

Tag - What kind of a tag should be expressed in the activated neurons

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14
Q

TRAP system example

A

Transgenic mouse linepromisses both spatial and temporal control of labeling these neurons.

There is a gene (Arc gene) that is only present in neurons that have recently been activated
Researchers have put a CreER T2 gene onder to control of this Arc gene, so whenever there in an activation CreEr is expressed

Only in the presence of neuronal activity and 4-TM CreRT T2 can go to nucleus it makes a recombination that leads to creation of tdtomato

available in transgenic mouse line, or virus-mediated

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15
Q

Summary

A
  • Fear memories are well retained
  • Fear learning is rapidly acquired by conditioning
  • Fear can be extinguished through extinction trials, but may return over time
  • mPFC-Amygdala-Hippocampus circuits are key for fear/extinction modulation
  • Engram neurons may hold representations of fear/extinction memories in brain
  • Technology available to target and lable engram neurons in vivo
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16
Q

Neuronal activity assassment

A

What is the aim of the experiment?

  • single time point or longitudinal analysis?
  • Post-mortem tissue or living animal?
  • Freely moving animal or head-fixed?
  • How much resolution is required?
  • Single cell, or population level analysis?

Tools to capture and image or record from activated neuronal ensembles
–> no manipulation

17
Q

Post-mortem analysis of neuronal activity

A

Combination of reporter protein expression with immunodetection of endogenous proteins

  • spectra of Green Fluorescent protein (GFP)
    in order to label the activated cells and then
    Transcardiac perfusions & brain dissection to sget snapshot of activated cells in that moment
  • combination of reporter protein expression with immunodetection of endogenous proteins

Immunofluorescence: Antibody tagged to a fluorophore

Immunostaining (look video explaining it) DAPI, cFos, tdTomato

18
Q

When would you prefer one or the other

A

cFos very fast and 90 min already starts decaying (only short-term) - 1-time analysis

tdTomato (indefinite labelling –> you do not loose information)

19
Q

Fiber photometry

A

Activity of a specific neuronal population in living animals, in real time

  • In vivo Ca 2+ imaging techniques-based on fluorescent sensors

Genetically encoded Ca 2+ sensor (GCaMP)

fluorescent sensor gets activated through calcium

Animals are implanted with optic fiber, from cells with high calcium you get emission from GFP back

Temporal specificity –> temporally-regulated promoter (e.g. activity-dependent promoters)

Spatial specificity –> AAV delivery site, cell-type specific promoters

Multi-fiber photometry –> up to 8 sites

Correct fluorescence signal levels (time-locked) calcium is happening in the moment when stimulus happens

20
Q

Fiber photometry Advantage/Disatvantage

A

Advantage:

  • suitable for longitudinal study
  • specific targeting of a certain brain region/cell type
  • In vivo recording from deep structures

Disatvantages:

  • Limited spatial resolution
  • (Minimally) invasive procedure
  • Restricted to fluorescent indicators (i.e. no electrophysiology)
21
Q

Miniature microscopes

A

Miniature, lightweight, and portable fluorescence microscopes

Imaging neuronal activity in specific brain regions in freely moving animals

you see all cells that are emitting calcium indicator –> changes in calcium signal detectable

Rely on fluorescence imeging (similar to fiber photometry), e.g. calcium sensor

Long-term examine te same population of cells

22
Q

Miniature microscopes

A

Advantage:

  • suitable for longitudinal study
  • freely moving animal
  • spatial resolution (cells)

Disatvantages:

  • Limited imaging depth (near the brain surface)
  • Lower spatial resolution in densely packed regions
  • Restricted to fluorescent indicators (no electrophysiology)
  • elaborate surgical operation
23
Q

Two-photon microscopy

A

The most resolution
Uses a focused laser beam –>excites fluorescent molecules in a tissue
Uses two photons to penetrate deeper structures
High spatial and temporal resolution

Cranial window surgery:

stereotactic device –> skin on top is removed and microscopy imaging window is inserted. A ring is also inserted and they are connected to the microscopy apparatus

24
Q

Two-photon microscopy advantage and disadvantage

A

Advantages:

  • deep tissue imaging
  • high spatial resolution
  • reduced photodamage
  • longitudinal study

Disadvantages:

  • complex setup and cost
  • slower imaging speed
  • invasive preparation (cranial window)
  • mostly anesthetized mice

Low temporal, high spatial resolution

25
Q

Summary

A

Multiple techniques available for assessing neuronal activity

  • Post-mortem analysis (immunohistochemistry):
    Flexible, tissue antibody staining, relatively cheap and less complex
  • Fiber photometry:
    Real-time neural monitoring, from populations of neurons, minimal invasive, freely moving animal
  • Miniscopes:
    Portable neural imaging, spatial and temporal resolution, freely moving animal, invasive
  • Two-Photon Microscopy:
    High-resolution imaging, head-fixed animal, invasive, complex setup