Lecture 5 (3A) - Amino Acids as Biosynthetic Precursors Flashcards

1
Q

Amino acids are precursors of many biologically important molecules

A
  • haem
  • sphingosine
  • histamine
  • dopamine
  • thyroxine
  • serotonin
  • glutathione (GSH)
  • pyrimidines - cytosine
  • purines - adenine
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2
Q

Molecules start small…

A

get big

too big = not energetically favorable

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3
Q

Haem

Ring formed from

A

GLYCINE and acetate

(acetate to citric acid cycle as acetyl CoA)

(succinyl CoA)

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4
Q

Haem ring

formation equation

A

succinyl CoA + glycine

α-aminolevulinate

  • monomer is α-aminolevulinate (ALA)
    • ​goes on to instruct overall structure of the haem ring
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5
Q

Dimerization of ALA in haem ring

A
  • 2 monomers make a single ring component
  • pyrrole ring
  • porphobiliniogen → 4 (of ALA)
  • linear tetrapyrrole → forms ring, D ring reversed (so recognize as specific way around)
  • mito → cytosol
    • acetate → methyl with SAM
    • back to mito in production of haem, then inclusion of iron into ring (requires energy)
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6
Q

Diseases (haem)

the porphyrias

porphobilinogen deaminase deficiency

A
  • most common
  • dimer only, no tetrapyrrole formation
  • abdominal pain, neuroligical disfunction
  • prot wine colored skin
  • King George
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7
Q

Diseases (haem)

the porphyrias

erythropoietic protoporphyria

A

limited life expectancy

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8
Q

Diseases (haem)

the porphyrias

congenital erythropoietic porphoria

A
  • red colored urine
  • teeth fluorescent red
  • skin photosensitive (only come out at night)
  • excessive hair growth
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9
Q

Sphingosine

A
  • an intermediate in sphingolipids
  • main group = acetate
  • reactive terminal from serine
    • head group, used in many amino acids
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10
Q

GABA-γ-aminobutyric acid

A
  • decarboxylation process (lose carboxylic acid)
  • formed from glutamate
  • important neurotransmitter
  • problems with urea cycle - disrupts production

→ buildup of glutamate

→ excessive side reactions, imbalanced

  • PLP dependent
  • Tay sach’s disease
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11
Q

Histamine

A
  • formed from histidine
    • by decarboxylation - lose carboxylic acid
  • PLP dependent
  • allergic reaction
  • control of acid in stomach
    • drug mimics histamine → controls acid in stomach
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12
Q

Dopamine

A
  • formed from tyrosine
    • addition of hydroxyl to ring
  • important neurotransmitter
  • precursor for melanin
    • removal of carboxyl (CO2) from amino acid

tyrosine

hyrdoxyl added to ring

L-DOPA

decarboxylated to form DOPAMINE

CO2 removed

hydroxylation of side chain

SAM methylates

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13
Q

Dopamine

makes various small molecules of the body

A
  • hydroxylation to form norepinephrin
  • methylation to form **epinephrine **(using SAM)
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14
Q

Dopamine is releated to the disease…

A

Parkinson’s disease

  • can’t pass blood brain barrrier, L-DOPA can, bosts dopamine production
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15
Q

Tyroxine

A

tetraiodothyronine

  • also formed from tyrosine
    • side chain on main chain, linked together to form main structure
  • formed in the thyroid (hence name)
  • functions in general metabolic stimulation (controls body)
    • need iodine in diet
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16
Q

Serotonin

A
  • for mood
  • formed from tryptophan
    • hydroxylation followed by decarboxylation
  • important neurotransmitter
  • controls smooth muscle contraction
  • addition to 5-hydroxyl group to ring
  • removal of carboxyl (CO2) from amino acid
17
Q

NAD+

A

nicotinamide unit

  • formed also from tryptophan
  • oxido/reductive agent
18
Q

Glutathione (GSH)

γ-glutamylcystrinylglucine

tripeptide

A
  • tripeptide
    • Glutamate (E)
    • Cysteine (C)
    • Glycine (G)
  • ECG bond together, not straight
  • gamma side chain linkage to form the amino acid bond
  • γ-amide bond in glutamate
19
Q

(GSH)

A
  • involved in detoxifications, transport, and metabolic processes
  • energy-requiring reaction 3 times = very energy intensive

glutamate + cysteine → γ-glu-cyn pairing

  • adds glycine (with ATP) → glutathione (synthetase)

inside the cell

→ made cyclic 5-oxo-proline (stable)

energy to break → back to glutamate = fully cyclinc

(to make glutathione - glutamate regenerated)

  • glutathione transferred out of the cell (detox)
  • γ glutyl transpeptidase brings somethingback into the cell and brings external amino acids with it == into cell again
  • amino acid removed, left inside (amino acid out → in cys and gly back into process)