Lecture 4 Flashcards
Messenger molecules and receptors
receptor = a site that avidly binds messenger molecules (endogenous or exogenous)
messenger molecules also called ligands, drugs, and mediators
ligand-receptor binding translates into an effect
Black box era
information limited by techniques
molecules could be added or injected
responses could be measured
what happened in-between inferred
Irving Langmuir - The adsorption isotherm
chemist at General Electric in NYC
designed longer lasting electric bulbs
studied adsorption of molecules on surfaces
molecules bound to free surfaces on films
two important factors
number of molecules
availability of free surfaces for binding
molecules moved towards surface and condensed onto them
once bound to the free surface, they tended to evaporate from the surface
equilibrium = the amount diffusing towards the free surface balanced by those tending to leave the surface
Occupancy model
AJ Clark = Quantification enters pharmacology
key assumptions
drugs exert effects by occupying receptors
response proportional to receptor occupation
one drug molecule combines with one receptor
for maximal response, all receptors have to be occupied
drug molecules are in excess of receptor availability
Framework for analysis
application of chemical equilibrium concepts (law of mass action)
similar to enzyme-substrate interactions
D + R DR complex —> response
Law of mass action
[signalling molecule] + [receptor] [signal-receptor complex] —> response
[receptor] refers to free receptors available for binding so at any time the total pool of receptors will be made up of free and bound receptors
remember key assumption = one signalling molecule binds to one receptor
Equilibrium
equilibrium is reached when the rate of formation of new signal-receptor complexes equals the rate at which existing signal-receptor complexes dissociate
kON [S][R] = kOFF [S,R]
rearrange to find the equilibrium dissociation constant (kD)
kD = kOFF/kON = [S][R]/[SR]
kD is the concentration of ligand that, at equilibrium is needed to saturate half of the receptors
kA is the reciprocal of kD and measures the affinity of the receptor for the signaling molecule
kA = 1/kD
Kinetics
kD is the ratio of 2 rate constants, the ON and the OFF
usually, the ON rate is relatively similar between molecules (being related to diffusion, unstirred layers etc.)
so OFF rate is the major determinant of affinity
neurotransmitters have very fast off rates, so the kD are high and affinities low
the converse is true for hormone receptors
Receptors
receptors: protein molecules on plasma membranes that respond to exogenous or endogenous chemicals
classified based on endogenous ligand
response translated into action
recognition - transduction - response
Stickability and doability
molecules
bind to receptors
produce a response
measures of molecule activity
affinity (stickability) = ability to bind to a receptor
efficacy (doability) = ability to produce a response
Concentration-response relations
standard approach
plot responses (y-axis) in relation to increasing concentration of the drug (x-axis)
consider two elements
concentration required to produce a given response (measure of affinity)
maximal response elicited (measure of efficacy)
Concentration-response curves
max effect vs min effect EC 50 intensity of effect/response (arbitrary units) vs. concentration/dose (log scale) drug effect and receptor-bound drug relative potency and relative efficacy
Stochastic nature of process
binding of a molecule to a receptor (protein) is stochastic
essentially random, non-deterministic
at any moment there will be a population of binding sites
which sites are bound will depend on the number of molecules that preferentially bind to that site
if the molecule has diffused away from that site, it becomes available for other similar (agonist) or dissimilar (antagonist) molecules
Agonism and antagonism
agonist = a molecule that binds to a receptor and elicits a response antagonist = binds to a receptor, does not elicit a response and prevents the agonist from functioning
Defining receptors
using agonists
logic = receptors recognize subtle variations in parent molecule
using antagonists
logic = variations can be introduced that prevent parent molecule from occupying receptor