Lecture 3 (ID)- Exam 2 Flashcards
- What is infectious disease?
- What is pathogenicity?
- What is virulence?
- Infectious Disease is the invasion of microorganisms into a host which harm that host’s tissue and disrupts the normal health function, leading to illness. Can be transmitted to others.
- Pathogenicity – ability to cause disease, used to compare species
- Virulence – the degree or extent of pathogenicity of a microorganism, used to compare strains within a species
What is transimission?
- Transmission – the spread of an infectious agent by means of direct or indirect contact between an infected host and a noninfected host
What is direct and indirect transmission?
- Direct transmission – immediate transfer of the disease agent by direct contact between the infected and the susceptible individual (touching, biting, licking, kissing, sex); direct projection (droplet) via coughing or sneezing within 3ft
- Indirect transmission – airborne, vehicle borne, vector borne does not require physical contact ( sneezing, coughing, talking >3ft)
What are the indirect transmission types?
- Airborne – microbial aerosols to respiratory tract
- Vehicle borne – contaminated material/objects (fomites) : bedding, counters, utensils, surgical instruments,
food, water. [Any disease can be transmitted via vehicle even if primary mode is direct] - Vector – any agent which transmits infection from one organism to another (ticks, mosquitos, food, water)
- What is incubation?
- What is epidemiology?
- Incubation – period of time between exposure and onset of symptoms
- Epidemiology – how often disease occurs in population and why
Direct Detection/ Microscopy:
* wet mounts: what is needed to be done prior to exam, what is it used for? What are examples?
- No fixation prior to exam
- Used for large &/or motile organisms visualized without staining
- Example:
* Giardia trophozoites
* Amebic cysts, or eggs
What diagnosis process is this?
Direct Detection/ Microscopy: Wet Mounts
When are wet monuts with KOH preparation used? What does the prep look like?
- Trichomonas
- Fungus
- Yeast
When do we use wet mount applications with enhancing stains? What does it look like?
India ink to visualize encapsulated cryptococci in CSF
Dark-field Microscopy:
* What it is used to examine?
* Examined under what?
* How does spirochetes appear?
- To examine lesions (chancres, mucous patches, condyloma lata, skin rash) for presence of Treponema pallidum or Borrelia burgdoferi
- Examined under a dark-field microscope at X40 or X100 power
- Spirochetes appear as motile, bright corkscrews against a black background
Gram stain
* Obtain what?
* Requires what? (2)
- Obtain a sample of exudate or body fluid, answer in minutes
- Requires collection with appropriate devices
- Requires filling out laboratory request forms
Do not collect, do the walls of the tissue
What is the likely bacteria in this slide?
Gram Negative Diplococci (Neisseria Gonorrhea) with oil emersion high powered lens
seen in sexaul active with genital discharge
What is the likely bacteria in this slide?
Gram Positive Cocci in Clusters (Staph or MRSA)
What is the likely bacteria in this slide?
Gram + Bacilli, single & in chains (Bacillus anthracis )
What is the likely bacteria in this acid fast stain? Why do we use acid fast stains?
Bacteria: Mycobacterium
* Detects organisms such as that retain carbol fuchsin dye after acid/organic solvation (pink or red)
For mycobacterium TB: acid fast organism appear what?
Acid-fast organisms appear pink or red against blue background of counter stain
What is a giemsa or writght’s stain of blood, what is it used for?
Intra-or extracellular parasites(e.g., Borrelia recurrentis, Plasmodium, Babesia (tick born), or Trypanosoma)
picture is plasmodium vivax (malaria)
Immunofluorescent Stains:
* What does it detect?
* What are examples of bacteria?
* What can be performed?
- Detect viruses within cultured cells or tissue specimens (herpes virus, rabies virus) or to reveal fastidious bacteria in specimens
* Legionella pneumophilia
* Pnemocystis jiroveci (PCP carinii) - Antibody stain could be performed
What biological stain is this?
Immunofluorescent Stain
Culture and sensitivity:
* usually what?
* How longs does it take for bacteria and for mycobacteria/fungus?
* Requires collection with what?
- Usually the “gold” standard
- Takes hours to days (culture) for bacteria, weeks for mycobacteria/ fungus
- Requires collection with appropriate devices, temperature and culture medium
- Requires filling out laboratory request forms
Culture and sensitivity
* What is the kerby-bauer method
* Reported as what?
* What is MIC?
- Antibiotic discs placed on culture plate (Kirby-Bauer Method)
- Reported as: sensitive, resistant, intermediary
- MIC is a “Minimum Inhibitory Concentration” of antibiotic needed to inhibit growth of bacteria
Macroscopic Antigen Detection:
* What it is used to identify?
* _ tests
* Typical test for what?
- Identify protein or polysaccharide antigen
- Color tests
- Typical test for blood type
Detection by Serology:
* look for what?
* Used for what organisms?
- Looks for antibodies in blood
- Used for fastidious organisms; answer in hours to days
* Viruses
* Syphilis
Detection by Serology:
* What is a paired serology?
Can be “paired serology” with an initial “acute” titer followed by a
“convalescent” titer in 2 weeks to determine a rise in antibody to
specific organism
* IgM antibodies for acute infection
* IgG antibodies persist for months to years; only gives an indication of some past infection.
* Toxoplasmosis
Detection by Molecular “Probes” (genetic material markers)
* Uses what? What bacteria is used for?
* Polymerase chain reaction (PCR) identifies what?
* What is less sensitive than a PCR? But what does it allow?
- Uses markers for genetic material (DNA/ RNA) in microorganism
* Gonorrhea/ chlamydia probes - Polymerase chain reaction (PCR) identifies minute quantities in a sample
- In situ hybridization less sensitive than PCR but allows localization of agent in a tissue section
* Fluorescent microscopy
Dark field microscopy is used to detect:
1. Mycobacterium
2. Treponema palidum
3. Neisseria
4. Trichomonas
5. Chlamydia trachomatis
- Treponema palidum
KOH preparation is best to detect:
1. Candida
2. Plasmodium
3. Pneumococcus
4. Trichomonas
5. Chlamydia
Candida and Trichomonas
Temperature Definitions:
* Hypothermia:
* Normal:
* Lower when? higher when?
* Pyrexia:
* Hyperpyrexia:
- Hypothermia (< 95 F or 35 C)
- Normal 98.6 F (37 C)->Lower in AM/ higher in PM – diurnal cycle
- Pyrexia (> 100.4 F-38 C)
- Hyperpyrexia (>106 F or 41 C)
* Usually heat stroke-> direct temp, stimulents
Temp is most senstitive in the morning
Fever:
* Abnormal elevation of body temperature due to what?
* Caused by what?
* Many _
- Abnormal elevation of body temperature due to change in hypothalamic thermoregulatory center
- Caused by a resetting of hypothalamic “set point” by prostaglandin’s (PGE 2)
* What is MOA of NSAIDs-> PDA occulsion in preg - Many causes-> systemic, allergic and infection
Clinical Manifestations of Fever:
* Elevated what?
* What are generalized symptoms?
* What are chills?
* What are Rigors?
- Elevated body temperature
- Generalized symptoms: myalgias, arthralgias, anorexia, & somnolence-> “I feel like c^@$!”
- Chills- a sensation of cold occur with most fevers +/- shivering (happens more with higher higher)
- Rigors: profound chills associated with piloerection, chattering teeth & severe shivering from bacterial infections or influenza
Clinical Manifestations of Fever
* What are sweats
* Increases what?
* May precipitate what in cardiac compromised?
* Alterations in what?
* When does delirium and convulsions happen?
- Sweats: fever “breaks” and activation of heat-loss mechanisms
- Increases HR & O2 demand fever
- May precipitate HF in cardiac compromised failure-> CHF
- Alterations in mental status
- Delirium & convulsions: very young, elderly & debilitated
Hyperpyrexia
* What is the temp?
* When does it happen? (4)
- Fever > 41.5°C (106. 7°F)
Causes:
* Severe infections
* CNS hemorrhages
* Heat stroke
* Substance abuse
* Reaction to anesthesia
Hyperthermia:
* What is Exogenous Heat Exposure
* What is endogenous hear production?
Exogenous Heat Exposure
* Work or exercise in hot environments produces heat faster than peripheral mechanisms can lose it
Endogenous Heat Production
* Can cause hyperthermia despite physiologic & behavioral control of body temperature
What are the differenital diagnosis of true fever?
- Infection
- Immune phenomena/ collagen vascular disease
- Vascular inflammation or thrombosis
- Infarction or trauma
- Granulomatous diseases (Sarcoid)
- IBD
- Neoplasms (Hodgkin’s disease, lymphoma, leukemia, RCC & hepatoma)
- Acute metabolic disorders (thyroid storm, Addisonian crisis)
Fever of Unknown Origin (FUO):
* What are the classifications (5)?
- Classic FUO -> viral/ bacteria
- Nosocomial FUO -> in hospital
- Neutropenic FUO-> no immune system, chem therapy
- HIV FUO
- Undiagnosed or factitious-> faking or undiagnosed
Fever of Unknown Origin:
* What is the etiology of developing counteries?
* What is the etiology of developed countries?
- In developing countries – infection is the primary etiology
- In developed countries – non-infectious inflammatory disease more common
FUO: classic
* What is the criteria?
- T= 101° F on several occasions for at least 3 weeks with
- 3 outpatient visits or
- 3 days of “intelligent & invasive” ambulatory investigation and at least 2 days’ incubation of cultures
- 3 days in hospital without elucidation of cause
FUO-Nosocomial
* What is the criteria for nosocomial?
- T =101°F or > develops on several occasions in hospitalized patient receiving acute care & infection was not manifest or incubating on admission.
- 3 days of investigation, and at least 2 days’ incubation of cultures
FUO-Neutropenic
* What is the criteria?
- T =101°F on several occasions and a neutrophil count <500/ L or is expected to fall to that level in 1 to 2 days
- Cause not identified after 3 days of investigation, including at least 2 days’ incubation of cultures
FUO-HIV associated
* What is the criteria?
- T =101°F on several occasions for >4 weeks for outpatients or >3 days for hospitalized patients and HIV + and not taking antiviral meds
- Appropriate investigation over 3 days, including 2 days’ incubation of cultures, revealing no source
What are the infections that can make undergraduates die fast?
Wind, Water, Wound, Walking, and Wonder Drugs,Wing/Waterway and (W)abscess.
What are the causes of FUO lasting more than six months?
Workup of FUO:
* What do you need to collect?
- Multiple blood samples (3-6) including samples for anaerobic culture, cultured for at least 2 weeks (periprosthetic infections)
- Blood, urine, or CSF tested/ stained/ cultures
* Perform CT/ MRI first before spinal tap - PE & laboratory examination to R/O abscesses, hematomas, or infected foreign bodies
- Liver biopsy, even with normal LFT’s if Dx uncertain & specimens cultured for mycobacteria & fungi
- Bone marrow aspiration & biopsy for histology & culture
- Peripheral blood smear for Plasmodium, Babesia, Trypanosoma, Leishmaniasis, & Borrelia
Work up of FUO
* What labs?
* What scopy exams?
* Repeat and do what?
- ESR, ANA, Antineutrophil cytoplasmic antibody (ANCA), RF, serum cryoglobulins
- Flexible colonoscopy/ endoscopy to R/O CA (cause of FUO & escapes detection by US & CT)
- Repeat CXR if new symptoms
- CT Chest & Abdomen
Work up of FUO:
* What do you need to US?
* What do you need to do with patients over 50
* Exploratory what?
Work-up of Nosocomial FUO:
* What is the source of infection?
* Sites of what?
* C. diff may be assoiciated with what/
* ~ 25% of patients have what?
* ~ 20 % of cases of nosocomial FUO are what?
- > 50% of patients with nosocomial FUO infected
* IV lines, septic phlebitis, & prostheses - Sites of occult infections (sinuses of intubated patients)
- Clostridium difficile colitis may be associated with fever & leukocytosis before diarrhea (usually at least 3 days following admission)
- ~ 25% of patients have non-infectious cause (cholecystitis, DVT, PE, drug fever, transfusion reactions, ETOH/drug withdrawal, adrenal insufficiency, thyroiditis, pancreatitis, gout, & pseudogout)
- ~ 20 % of cases of nosocomial FUO undiagnosed
What is still’s disease? What does it respond well to?
- Still’s disease is inflammation with high spiking fevers, evanescent (transient) salmon-colored rash and/or arthritis Still’s disease was first described in children, but it can occur in adults (adult-onset Still’s disease).
- Responds well to NSAIDs
Nosocomial FUO:
What is the Empirical antibiotic coverage for nosocomial FUO?
vancomycin for MRSA and broad-spectrum gram-negative coverage with piperacillin/tazobactam (Zosyn®), ticarcillin/clavulanate (Timentin®), imipenemicilastatin(Primaxin®), or meropenem (Merrem®)
Neutropenic FUO:
* Susceptible to what?
* What is the treatment?
- Susceptible to: focal bacterial & fungal infections, bacteremic infections, catheter infections & perianal infections
- Candida, Aspergillus, HSV or CMV
- Vancomycin plus ceftazidime or imipenem for bacterial sepsis empirical coverage
What are the causes of HIV associated FUO?
W/U of HIV-Associated FUO:
* What do you need to do?
* What type of x-ray
* > 80% of HIV patients with FUO are what?
* Consider what?
Treatment of FUO’s:
* Continued what?
* Avoidance of what?
* What trials?
* Remember what?
- Continued observation & examination to identify source
- Avoidance of “shotgun” empirical Rx unless somewhat certain for source um
- Therapeutic medication trials
- Remember TB
* +PPD skin test or if granulomatous hepatitis
Treatment of FUO’s:
* Response of what?
* Colchicine for what?
* When is prognosis generally good?
- Response of RF & Still’s disease to ASA & other NSAID’s
- Colchicine for familial Mediterranean fever
- When no underlying source of FUO is identified after prolonged observation (> 6 months), prognosis is generally good
What groups of people do you need to be careful of infections without fevers?
What is observed in patients with hypothermia?
- Hypothermia is observed in patients with septic shock
Reasons not to treat fever that may aid diagnosis?
What are relapsing fevers? What is an example of bacteria that causes this?
- Febrile episodes separated by intervals of normal temperature
- Borrelia infections (Lyme disease) (several day afebrile periods)
What are tertian fevers? What bacteria causes this?
- Fever Paroxysms on 1st & 3rd days
- Plasmodium vivax
What is quartan fevers? What is an example of bacteria that causes it?
- Paroxysms on first & fourth days
- P. malariae
What is pel-ebstein fever? What is an example that causes it?
- Lasting 3 to 10 days then afebrile periods of 3 - 10 days
- Hodgkin’s disease / lymphomas
One week good, one week bad
What is cyclic neutropenia fever?
- Every 21 days with neutropenia.
What are indications & Regimens to Treat Fever
- Not certain fever helps
- Reduces HA, myalgias, & arthralgias
Decision to Treat Fever:
* Reduce what? Increase what?
* Most fevers are what?
* What is a potent immunosuppressant?
- Reduce elevated set point and increase heat loss
- Most fevers are self-limited infections, viral
- PGE2 a potent immunosuppressant
– NSAID increases the anti-influenzal AB level (preferred over tyanol in flu)
- When actaminophen preferred?
- What do you use in children and why
Acetaminophen preferred
* NSAIDs and ASA cause GI symptoms
* Blocks PGE2 centrally
In children, use acetaminophen
* No ibuprofen until 6mo old
* ASA increases risk of Reye’s syndrome
Indications & Regimens to Treat Fever
* What drugs are more effective together?
* What are different ways of giving the drug
* What is indicated for hyperpyrexia?
- Acetaminophen and NSAIDs are more effective together
- Parenteral preparations of NSAIDs & rectal suppository preparations
- Dantrolene – indicate for hyperpyrexia
Definitive Indications to Treat Fever:
* Fevers increase demand for what? What does this cause?
* Worsening what?
* Children with a hx of what? Treating with antipyretics has not been shown to do what?
* What is DOC for hyperpyretic patients >105-106°F?
What is Systemic Inflammatory Response Syndrome (SIRS)
- SIRS is a body response to a stressor: Infectious or noninfectious
For SIRS, what is the criteria?
What is bacteremia?
- Bacteria in blood and + blood cultures
- Can be septic without documented bacteremia
- What is sepsis/septicemia?
- What is severe sepsis?
Sepsis/septicemia:
* SIRS + bacteremia (microbes or their toxins in blood)
Severe sepsis
* Sepsis and one organ dysfunction or Lactic Acid >2 but <4