Lecture 21 - Antiviral agents Flashcards

1
Q

What is a virus?

A

A small infectious agent that must invade a living cell to reproduce

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2
Q

Examples of viral diseases

A

Influenza, AIDS, chickenpox, cold sores, rabies, hepatitis, pneumonia, SARS, COVID-19, MERS, ebola

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3
Q

Baltimore classification of viruses -
Class 1

A
  • dsDNA (+/-)
  • Herpes virus, poxvirus, adenovirus, papilllomavirus
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4
Q

Baltimore classification of viruses -
Class 2

A
  • ssDNA (+)
  • Adeno-associated virus
  • Must be transcribed into dsDNA before mRNA
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5
Q

Baltimore classification of viruses -
Class 3

A
  • dsRNA (+/-)
  • Reovirus
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6
Q

Baltimore classification of viruses -
Class 4

A
  • (+) ssRNA
  • Togavirus, poliovirus, foot-and-mouth disease virus, Hep A, Hep C
  • Can be translated directly into protein
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7
Q

Baltimore classification of viruses -
Class 5

A
  • (-) ssRNA
  • Influenza virus
  • Must have gemone copied by an RNA replicase to form positive-sense RNA
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8
Q

Baltimore classification of viruses -
Class 6

A
  • (reverse) ssRNA
  • HIV
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9
Q

Baltimore classification of viruses -
Class 7

A
  • (reverse) dsDNA
  • Hep B virus
  • Replicate via ssRNA intermediate
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10
Q

What cells does HIV infect?

A

CD4+ cells

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11
Q

Basic steps of HIV life cycle

A
  1. Viral attachment
  2. fusion to CD4+ cell
  3. Reverse transcription of viral RNA into DNA
  4. Integration of DNA into host nucleus
  5. Transcription and translation of normal and viral mRNA
  6. Virion assembly and budding
  7. Maturation of protease
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12
Q

What are the most common targets of antiviral agents?

A

Differences between the structures and functions of viral and human proteins or focus targets that are not essential fr the host but critical for the virus

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13
Q

Viral life cycle

A
  1. Attachment and entry into cell
  2. Uncoating of RNA or newly synthesized mRNA
  3. Protein synthesis using host ribosomes
  4. Post-translational processing and genome replicaton
  5. Assembly and maturation
  6. Egress and release from host cell
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14
Q

What class of drugs are used to prevent viral attachment and entry?

A

Attachment and entry inhibitors

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15
Q

What class of drugs inhibits viral uncoating?

A

Ion channel blockers

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16
Q

What class of drugs inhibits post-translational processing of viral proteins?

A

NS3/4A inhibitors

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17
Q

What classes of drug inhibits viral genome replication?

A

Polymerase inhibitors, NSSA inhibitors, Intergrase inhibitors

18
Q

Whar class of drugs inhibits viral assembly?

A

HIV protease inhibitors

19
Q

What class of drug inhibits excretion of viral agents?

A

Neuraminidase inhibitors

20
Q

Inhibition of viral attachment and entry

What is Maraviroc?

A

A small-molecule negative allosteric modulator of the CCR5 chemokine receptor
- Blocks cellular infection of HIV that use CCR5 for attachment and entry

21
Q

Inhibition of viral attachment and entry

What is Enfuvirtide (T-20)?

A

A synthetic peptide drug that mimics HR2, binds to HR1, and prevents HR2-HR1 interaction
- Drug traps the virus-host cell interaction at the attachment stage, preventing membrane fusion and viral entry

22
Q

What is an allosteric modulator?

A

A drug that binds to a receptor at a site distinct from the active site. Induces a conformational change in the receptor, which alters the affinity of the receptor for the endogenous ligand.
- Positive allosteric modulators increase the affinity
- Negative allosteric modulators decrease the affinity

Affects affinity or potency, antagonists affect efficacy

23
Q

Inhibition of viral uncoating

Amantadine and rimantadine

A

Block M2 proton channel function –> inhibits acidification of the interior of the virion, matrix protein dissociation, and uncoating (low pH promotes uncoating and virion release)
- Used to treat influenza
- Amantadine also treats parkinsonism, a weak antagonist of the NMDA receptor, increases dopamine release, and blocks dopamine reuptake.

24
Q

Inhibition of viral gene expression (posttranslational protein cleavage)

Simeprevir, Telaprevir, Boceprevir, Paritaprevir

A

Anti-HCV protease inhibitors that cleaves the Hepatitis C virus polyprotein
- Sites of cleavage: viral NS2 protease, viral NS3/4A protease
- All four drugs inhibit viral HCV NS3/4A protease with higher potency than they do human proteases

25
# Inhibition of viral genome replication What is NS5A?
A zinc-binding and proline-rich hydrophilic phosphoprotein that is translated from the HCV genome and plays a key role in HCV RNA replication
26
# Inhibition of viral genome replication Ombitasvir
Inhibits viral RNA replication by interfering with the viral NS5A protein
27
# Inhibition of viral genome replication Acyclovir | Also Ganciclovir but less
A nucleoside analogue that is selectively phosphorylated by HSV or VZV thymidine kinase to generate acyclovir monophosphate --> blocks further DNA chain growth | Ganciclovir via viral UL97 rather than TK
28
# Inhibition of viral genome replication Zidovudine (AZT)
Specifically inhibits viral RT from being replicated by cellular DNA polymerase via thymidine kinase
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How do you measure cellular toxicity?
CC50 - the cytotoxic concentration that kills 50% of the cells
30
What is the selectivity index of an antiviral?
The ratio of cellular toxicity to potency (antiviral activity) | Higher SI = more effective and safe, theoretically
31
What is Remdesivir (RDV)?
A nucleotide analog inhibitor of RNA-dependent RNA polymerases (RdRps) - Pro-drug that metabolizes into GS-441524 (adenosine nucleotide analog) - Interferes with viral RdRps and evades proofreading by viral exoriboniiclease causing decreased viral RNA production, pre-mature termination, and inhibits RNA repication
32
# Inhibition of viral genome replication Foscarnet
A pyrophosphate analogue that directly inhibits viral DNA and RNA olymerases - Anti-HSV and anti-CMV effect
33
# Inhibition of viral genome replication Non-nucleotide reverse transcriptase inhibitors (NNRTIs)
Inhibits HIV-1 reverse transcriptase - Efavirenz, Nevirapine, Delavirdine, and Etravirine
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# Inhibition of viral genome replication Raltegravir
Anti-HIV integrase inhibitor - Prevents HIV DNA integration into host genome
35
# Anti-HIV protease inhibitors to inhibit viral maturation Anti-HIV protease inhibitors
- Amprenavir, saquinavir, lopinavir, indinavir, ritonavir, nelfinavir, atazenavir, tipranavir - May increase risk for heart disease - Viral long-polypeptides must be cut into smaller fragments by proteases in order to form functional proteins
36
# Neuraminidase inhibitors to prevent viral release from cell Zanamivir, oseltamivir
Mimics sialic acid which blocks hydrolysis of neuraminidase, inhibiting release of virus
37
What is hemagglutinin?
A substance (any group of naturally occuring glycoproteins) that causes red blood cells to clump together (hemagglutination) - Occurs when hemagglutinin occurs as a surface antigen on viruses - Inhibited with addition of antibody
38
Different ways to modulate the immune system against viruses
1. Immunization - Active and passive immunization or vaccination (mRNA vaccine) 2. Interferons - interaction of interferons with thier receptors induces a series of signaling events and inhibit replication of some viruses
39
# Drugs that modulate the immune system Imiquimod
Interacts with the toll-like receptors TLR7 and TLR8 to boost innate immunity, including secretion of interferons and other cytokines - Approved for treatment of certain diseases caused by HPV
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