lecture 2 (18) microbial metabolism, structure and fxns Flashcards

1
Q

bacteria exist in a haploid or diploid state?

how many chromosomes?

A

haploid =

1 chromosome

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2
Q

binary fission

A

an exact copy of the genome is made and a single cell divides into 2 (binary) daughter cells
how bacteria replicate

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3
Q

what phases of bacterial growth make the bacteria sensitive to antimicrobials

A

lag and exponential phases

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4
Q

what phase of bacterial growth is more likely to develop spores? what kind of bacteria does this?

A
  • decline phase

- gram pos

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5
Q

what are the phases of bacterial growth

A

lag
exponential
decline

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6
Q

what two elements are needed for growth always

A

carbon and nitrogen

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7
Q

what two ways can bacteria be divided into groups in terms of their metabolic props

A

via how organism deals with oxygen and via what carbon and energy source they use

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8
Q

aerobes
anaerobes
facultative anaerobes
microaerophilic

A

aerobes- require oxygen to meet energy demands
anaerobes- use fermentation, die in oxygen
facultative anaerobes- can respire and ferment
microaerophilic- grow best at low oxygen but can growth without too

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9
Q

how can you tell if a bacteria is an anaerobe or an aerobic bacteria?

A

aerobes can die in the presence of certain forms of oxygen like hydrogen peroxide and superoxide. therefore, aerobes have developed a mechanism by which they can break them down. that is with catalase (breaks down hydrogen peroxide into water and oxygen) and superoxide dismutase that detoxifies oxygen. if a bacteria dies in the presence of these oxygen species, we know it’s anaerobic

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10
Q
in terms of catalase and superoxide dismutatse, peroxidase what do these have
obligate aerobes
facultative anaerobes
microaerophilic bacteria
obligate anaerobes
A

obligate aerobes- catalase, superoxidase, peroxidase
facultative anaerobes-catalase, superoxidase
microaeophilic bacteria-catalase, superoxidase
obligate anaerobes-none

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11
Q

aerobic vs anaerobic vs fermentation

A

aerobic- oxygen is the terminal electron acceptor
anaerobic- some inorganic composing serve as the electron acceptor
fermentation- ORGANIC metabolic substrate used if it’s fermentable

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12
Q

how is folate involved in targeting and killing bacteria?

A

in bacteria, folate which is essential for the synthesis of purines and thymidine, is derived from PABA (para-aminobenzoic acid) wheras in humans, it’s obtained from diet.
if wanna get rid of the bacteria, target PABA

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13
Q

what two antifolates are used to kill of bacteria

A

sulfonamides which inhibit dihydropteroate synthase

and DHFR inhibitors which inhibits dihydrofolate reductase (trimethoprim)

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14
Q

quinolones

A

-target bacterial DNA gyrase that is required to unwind/wind DNA during DNA polymerization

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15
Q

what is an important aspect of bacterial replication that we can target because it’s different from our replication

A
  • bacteria use a 70s ribosome vs an 80s so we can target that ribosome to kill it
  • bacteria also replicate via co-transcriptional translation meaning it does both at once- we can use this as a target
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16
Q

what is used to crosslink peptidoglycan?

A
  • peptide at lys to D-alanine
17
Q

steps of peptidoglycan synthesis

A

1) activate sugars (NAG) and (NAM) with UDP
2) add pentapeptide to ONLY NAM- this is independent of mRna and ribosomes- done by an enzyme. peptide has two variable amino acids attached to a diamino acid followed by 2 D-ala
3) UDP-NAM-peptide attached to bactoprenol (lipid at surface of CYTOPLASMIC membrane) thru pyrophosphate link with the release of UMP
4) NAG is added to NAM-pentapeptide-bactoprenol complex via attachment to NAM
5) bactoprenol tx the complex across the membrane to the outside of the cell
6) disaccharide unit attached to end of growing peptidoglycan via transglycosylases
7) bactoprenol recycled back into the cell and used again later

18
Q

transpeptidation

A
  • creates mesh-like structure of peptidoglycan

- needs a di-amino group in the third position with a D alanine in the fourth