Lecture 15 - Phylogenetics Flashcards

1
Q

What is phylogenetics?

A

The study of evolutionary relationships among groups of organisms.

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2
Q

What is a phylogenetic tree?

A

A hypothesis of the order in which evolutionary events are assumed to have occurred.

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3
Q

Give the two directions which phylogenetic trees can be shown.

A
  • Top to bottom

- Left to right

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4
Q

When did monocotyledons separate from dicotyledons?

A

200mya

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5
Q

What is a node?

A

Where one branch splits into two

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6
Q

What is a root?

A

The common ancestor for all those in the tree.

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7
Q

Which part of a phylogenetic tree represents a speciation event?

A

A node

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8
Q

What is an outgrip?

A

A taxon outside of the group of interest.

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9
Q

How do you fin the root in a tree?

A

Look for an outgroup.

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10
Q

What is a cladogram?

A

A phylogenetic tree formed using cladistic methods, showing branching pattern only (shows which are related to which).
- Involves classification into clades based on shared derived characteristics.

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11
Q

What is a synapomorphy?

A

A trait shared among species because the common ancestor of those species also had that trait.

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12
Q

Which should you look at when forming a phylogenetic tree: homologous or analogous characteristics?

A

Homologous

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13
Q

What is a homoplastic character state?

A

A trait that is shared by two or more taxa because of convergence, parallelism or reversal.

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14
Q

What is the modified nostrils on top of the head in cetaceans and dinosaur group Macronaria and example of?

A

Homoplastic character state

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15
Q

What are plesiomorphic characters?

A

An ancestral trait, which presence of does not give any information about relationships between species in the tree.

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16
Q

What is apomorphy?

A

A derived or specialised character.

17
Q

What is autapomorphy?

A

A derived character that is found in only one taxon.

18
Q

Why are autapomorphies not useful in trees

A

Because they don’t say which organism it is most related to.

19
Q

What does a clade consist of?

A

An ancestor organism and all of its descendants, a monophyletic group.

20
Q

What are phylogenetic groups based on?

A

Clades

21
Q

What kind of group is the group ‘reptiles’?

A

A paraphyletic group

22
Q

What is a paraphyletic group?

A

A group that contains the common ancestor, but not all of the descendants.

23
Q

What is the class mammalia based on?

A

The synapomorphy of teeth

24
Q

Give an example of a polyphyletic group.

A

‘Warm-blooded’ organisms

25
Q

What is a phylogram?

A

A phylogenetic tree that has branch lengths proportional to the amount of character change.

26
Q

What is a chronogram?

A

A phylogenetic tree that explicitly represents evolutionary time through its branch lengths.

27
Q

What is parsimony?

A

Says that:

When constructing a phylogenetic tree, the best hypothesis is the one that requires the fewest evolutionary steps. :-)