Lecture 12b Flashcards

1
Q

what membranes can light pass through?

A
  • plasma membrane
  • chloroplast membrane
  • thylakoid membrane
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2
Q

in chloroplasts where does the light reactions occur?

A

light reactions of photosynthesis occur in the thylakoids

light energy -> ATP and NADPH

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3
Q

what are the four light reactions ?

A
  • photosystem II and I (PSII and PSI)
  • electron transport chain 1 and 2
  • ATP synthase
  • NADP+ reductase
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4
Q

what are the two components that make up photosystems ?

A

A) **light harvesting complexes:
- contain pigment molecules (antennae) which surround the reaction center complex
B) a reaction center complex:
- contains a specialized pair of chlorophyll a pigments

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5
Q

light harvesting complexes

what happens once the electron is transfered through inductive resonance (dance floor) and is at the reaction center?

A

once at the reaction center, a special pair of chlorophyll a tranfers an excited electron to the primary electron acceptor

here the excited electron is transferred

electron transfer only occurs in the reaction center between chlorophyll a molecules and a primary electron acceptor

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6
Q

what does the reaction center contain?

A
  • a special pair of chlorophyll a molecules
  • a primary electron acceptor

the chlorophyll a molecules use the energy from light to boost one of their electrons to a higher energy level and to transfer it to a different molecule = the primary electron acceptor

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7
Q

what are the similarities and differences between PSII and PSI?

A
  • both are in the thylakoid membrane
  • both participate in the light reactions of photosynthesis
  • *PSII functions first *
  • they **differ in their reaction centers **
  • each has a specific primary electron acceptor next to a special pair of chlorophyll a molecules associated with *specific proteins *
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8
Q

what is the reaction center of PSII?

A

P680
- its special chorophyll a pigment pair has optimal light absorbance at wavelength 680 nm

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9
Q

what is the reaction center of PSI?

A

P700
- its special chlorophyll a pigment pair has optimal light absorbance at wavelength 700 nm

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10
Q

what causes the difference in absorbance between PSII and PSI

A

due to the proteins associated with chlorophyll molecules because the chlorophyll molecules themselves are identical

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11
Q

what are the consequences/results of P680 primary electron acceptor being in an excited state and left with an oxidized pair of chlorophyll a molecules?

A
  • water is split by an enzyme to replace the electrons taken from chlorophyll a molecules in the photosystem II reaction center
  • oxygen is generated as a product
  • H+ is released into the thylakoid space
  • the electrons are taken by chlorophyll a one at a time and therefore remain in the reaction center.
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12
Q

what is the first ETC chain of PSII made of?

A
  • plastoquinone (Pq)
  • a series of cytochromes (Cyt)- this stage creates H+ gradient
  • plastocynanin (Pc)
  • P700 in PSI

ETC1 creates a proton gradient in the thylakoid membrane which drives chemiosmosis and synthesizes ATP

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13
Q

what happens in the PSI reactions?

A
  • the excited electron is transferred from P700 to the primary acceptor of PSI following which it gets transferred to the second ETC (ETC2).
  • ferredoxin (Fd) accepts the electrons from the primary acceptor and transfers them to NADP+, generating NADPH
  • catalyzed by the enzyme NADPH reductase
  • No H+ gradient is made, so no ATP is made
  • the electrons from ETC1 are transferred to P700 to regenerate their initial reduced state.
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14
Q

what is NADP+?

A

NADP+= nicotinamide adenine dinucleotide phosphate
- its a coenzyme just like NAD+ is in cellular respiration. The main difference with NAD+ is the presence of an extra phosphate group.
- NADP+ serves as an electron carrier from the light reactions to the calvin cycle in photosynthesis.

think of the added p for phosphorylation

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15
Q

what are the two possible flow of electrons through photosystems?

A

1) linear electron flow:
PSII -> ETC I -> PSI -> ETC 2
- makes both ATP and NADPH
- makes O2
2) cyclic electron flow
- only go through PSI and uses ETC1 instead of ETC2
- makes ATP (no NADPH)
- no oxygen made

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16
Q

explains what happens in Linear electron flow

A

PSII produces high energy electrons which are transferred to ETC1
- the resulting oxidized chlorophyll a pair is reduced by an electron from water, making O2 in the process
- as the electrons move down ETC1 the energy is released and used to create a H+ gradient used for ATP synthesis
- at end of ETC1 electrons are transferred to the reaction center in photosystem I
- there, light energy boosts their energy level which is used to generate NADPH following ETC2

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17
Q

what is cyclic electron flow?

A

only uses PSI and short circuitrs the rest of the steps:
- transports electrons through the ETC1 and from there back P700 in PS1.
- there is no production of NADPH and no release of O2
- there is however the production of ATP
- ferredoxin (Fd) brings the electrons to the cytochrome complex of ETC1 rather than to NADPH+ reductase.

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18
Q

what happens when the calvin cycle runs low on ATP?

A

the NADPH will accumulate as the Calvin cycle slows down.

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19
Q

which does the calvin cycle consume more of? ATP or NADPH?

A

consumes more ATP than NADPH

the calvin cycle can run with no sunlight ( can run in the dark ) because of the excess ATP, but once it runs out of ATP it needs sunlight to function again

20
Q

what is photophosphorylation?

A

the conversion of energy from a light-excited electron into the phosphate bond of a ATP molecule

21
Q

what are the three steps of photophosphorylation?

A

1) when light energy boosts the energy state of an electron, the electron is transferred to a primary electron acceptor in a photosystem. The electron is then transferred to an ETC
2) transport through the ETC lowers the energy level of electrons. This released energy is used to create a H+ gradient across the thylakoid membrane ( high concentration of H+ in the thylakoid space/lumen )
3) chemiosmosis by ATP synthase: the proton graident drives ATP synthesis.

22
Q

what happens in ETC 1 of photophosphorylation of ATP?

A
  • the ETC 1 pumps H+ across the thylakoid membrane from the stroma into the thylakoid space, against its concentration gradient
  • as a result, H+ accumulates in the thylakoid space

H+ diffuses down its concentration gradient back into the stroma through ATP synthase found within the thylakoid membrane

23
Q

where are the catalytic knobs of ATP sythase located in chloroplasts?

A

located on the stroma side of thylakoids

24
Q

where is ATP synthesized making it available for the calvin cycle?

A

stroma

25
Q

review

what are the two types of ATP synthesis?

A

ATP synthesis in the mitochondria (1) and within chloroplasts (2)

26
Q

how does carbon enter the calvin cycle (dark / light-independent pathways) and how does carbon exit?

A

carbon enters in the form of CO2 and exists in the form of sugar

27
Q

what does the calvin cycle use for energy and consume to make sugar?

A

used ATP as an energy source and consumes NADPH to make sugar

28
Q

true or false

the calvin cycle is anabolic

anabolic= building of complex molecules from simpler ones in order to undergo metabolism

A

true

29
Q

what is the starting material of the calvin cyle?

hint= same as the krebs cycle

A

uses RuBP ( 5-carbon sugar) that is regenerated after some molecules enter the cycle and others exit the cycle

CH2O = sugar = RuBP

RuBP is the product created which then is used to start the next cycle

30
Q

what is the sugar produced by the calvin cycle?

A

G3P ( glyceraldehyde-3-phosphate ) not glucose itself

3 carbons = three turns of the calvin cycle produces G3P

31
Q

what are the three parts that the calvin cycle is divided into?

A

1) carbon fixation
2) reduction
3) renergation of the CO2 acceptor

32
Q

carbon fixation

what is the enzyme used in phase 1 of calvin cycle

A

the enxyme rubisco
- rubisco is the most abundant protein in chloroplasts and on earth
- RuBP is the entering molecule of this cycle(5C sugar)

33
Q

what is the direct competitor of rubisco’s active site?

A

O2 is the direct competitor

34
Q

carbon fixation

what is the intermediate of phase 1 of calvin cycle

A

6 carbon intermediate that is short lived as it is so energetically unstable that it will split in half immediately

each co2 fixed leads to 3-PGA ( 3-phosphoglycerate )

35
Q

carbon fixation

what do we rely on photosynthesis to do?

A

remove the excess atomospheric CO2

36
Q

reduction

what gets phosphorylated in phase two of calvin cycle

A

each molecule of 3-PGA gets phosphorylated into 1,3-biphosphoglycerate using ATP

37
Q

reduction

why is NADPH oxidized in phase 2 of calvin cycle?

A

NADPH is oxidized to reduce 1,3-bisphosphoglycerate into G3P

*remember that G3P is the intermediate in glycolysis therefore can be used for gluconeogenesis or carbon fixation (making sugar in plants)

38
Q

reduction

how many G3P leave the calvin cycle in phase 2?

A

only 1 molecule of G3P leaves the calvin cycle and the other 5 molecules remain inside and are used in the next phase

don't need to know the names of the molecules
39
Q

what happens to the G3P molecule that leaves the calvin cycle at the end of the reduction phase?

A

1) 50% used as fuel for cellular respiration in plant cell mitochondria ( converted into sucrose and exported to other non-photosynthetic parts of the plant for this purpose
2) used to synthesize all major organic molecule in plants such as carbohydrates, lipids and proteins - a large quantity is used to synthesize cellulose
3) the excess is converted into glucose and used to make starch (stores in chloroplasts, roots, tubers, seeds and fruits)

40
Q

reduction

in phase 2 of the calvin cycle, how much of CO2, ATP and NADPH is used and how much of G3P is made?

A
  • used 3 CO2
  • used 6 ATP
  • used 6 NADPH
  • made 6 G3P ( only net gain of 1 G3P)
41
Q

regeneration of the CO2 acceptor

what is the main step of phase 3 of the calvin cycle?

A

last phase is to renegerate RuBP so that the cycle can start over.

42
Q

phase 3

what is the CO2 acceptor?

A

RuBP
its the acceptor since each entering CO2 combines with a RuBP molecule to initiate the cycle

43
Q

regeneration of the CO2 acceptor

in phase 3 of the calvin cycle, how much ATP is used?

A

3 ATP used in a series of catalyzed reactions to convert the remaining five G3P molecules into 3 molecules of RuBP so that the cycle can continue

we get 3 RuBP from 5 G3P (3C)

44
Q

in all three phases of the calvin cycle, how much ATP and NADPH is used?

A

1) carbon fixation ( phase 1)= 0 ATP and 0 NADPH
2) reduction (phase 2) = 6 ATP and 6 NADPH
3) regeneration of RuBP (phase 3) = 3 ATP and 0 NADPH

for 3 molecules of CO2

more ATP is required (9 ATP) than NADPH (6 NADPH) although in light reactions as much ATP is made as NADPH - this is why ATP will be depleted at a faster rate than NADPH

45
Q

what happens at the very end of the calvin cycle?

what gets returned?

A

ADP and Pi are returned to the light reactions where they are converted back to ATP by chemiosmosis
NADP+ is also returned to the thylakoid where it gets reduced as part of the light reactions