Lab Final Flashcards

1
Q

What is Microplusin?

A

Antimicrobial Peptide

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2
Q

What are antimicrobial peptides?

A

Peptides that help attack bacteria

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3
Q

Is the antimicrobial peptide that we are working with anionic or cationic?

A

Catatonic

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4
Q

What organism is Microplusin derived from?

A

Isolated from the cell-free hemolymph and egg of the tick Boophilus microplus

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5
Q

What is PRSETA?

A

It is a vector used for high level protein expression

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6
Q

PRESTA has an antibiotic resistance gene to what antibiotic?

A

Ampicillin

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7
Q

What are competent cells?

A

Cells that can uptake foreign DNA

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8
Q

Define transformation.

A

Foreign DNA introduced into a cell

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9
Q

What type of E. coli were used the transformation?

A

BL21

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10
Q

What media was used to grow the transformed cells?

A

LB Media

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11
Q

What antibiotic was used?

A

Ampicillin

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12
Q

Describe the Lac Operon

A

Cluster of genes used to regulate lactose

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13
Q

What is heat shock and why is it performed?

A

To form pores in the cell for DNA uptake

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14
Q

What is IPTG? How does it work?

A

IPTG is an inducer that mimics lactose and is used to induce protein expression

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15
Q

For how many hours did we incubate the induced protein after induction with IPTG?

A

4 hours

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16
Q

True or False. In order to express a gene that is controlled by the T7 promoter, you need to add IPTG to block the function of the lac repressor.

17
Q

Name the method for colorimetric detection and total quantification of protein.

18
Q

How does the BCA assay work? What does BCA stand for?

A

bicinchoninic acid assay; works by measuring the level of amino acid composition of the protein.

19
Q

BCA is what type of reaction? Explain.

A

Colometric measure the absorption

20
Q

True or False. The total quantification of the protein was measured in absorbance

21
Q

What does SDS-PAGE stand for? How does it work?

A

Polyacrylamide gel electro

22
Q

What is SDS? What does it do to proteins?

A

Sodium deodecyl Sulfate gives a negative charge to proteins

23
Q

What are the metals used for greatest affinity for histidine?

24
Q

How many histidine does PRSETA have?

25
What does IMAC stand for?
Immobilized metal affinity chromatography
26
How does the nickel resin column work? What does the histidine tag bind to?
His-tag binds tightly to the immobilized metal ions because the side chain of Histidine.
27
What does imidazole bind to? What does imidazole compete with when loaded into the nickel resin column?
imidazole, has a specific binding affinity to metal ions (in this case, nickel II). As a result, the desired protein is binded tightly to the beads while other proteins flow through the column easily.
28
What is bromo-phenol blue?
A pH indicator, a color marker to monitor the progress of polyacrylamide gel electrophoresis.