Lab Exam Flashcards
How do you prepare a methanol-fixed bacterial smear?
From solid culture: one drop sterile saline mixed with one loopful bacteria From liquid culture: transfer two loopfuls to slide smear around slide to thin out Allow smear to air dry Cover surface of slide in methanol After 1 minute, pour off excess methanol and allow to air dry once again
TRUE OR FALSE: Streptococcus species are catalase positive
FALSE, STAPHYLOCOCCUS species are the ones that are catalase positive
When differentiating gram positive cocci, what is the first test you would use and why?
First test would be a catalase test to determine if it is a Staphylococcus or Streptococcus species. (Staph is positive)
_____ is the only coagulase-positive Staphylococcus species
S. aureus
How does one perform a coagulase test? What is a positive result?
Mix one loopful bacteria into one drop sterile saline. Add a drop of rabbit coagulase to the slide and mix. Watch for grainy/gritty coagulation (positive)
What is the purpose of DNase agar? What is DNase and how is it identified by the medium?
Purpose is to differentiate Serratia from Enterobacter and S.aureus from other Staph. DNase is an exoenzyme that catalyzes hydrolysis of DNA. After incubation, HCl is added and if a cloudy precipitate (HCl reacting with DNA but not nucleotides) forms around bacteria, result is positive. - or can have methyl green as indicator and changes to clear if pos
What does blood agar test for? What does it contain?
Tests for type of haemolysis. Beta is indicated by clearing around bacteria, alpha indicated by darkening, and gamma indicated by nothing. Gamma means no haeomolysis occurred. Usually blood agar is 5% sheep’s blood
What does the blood agar test mean when identifying gram positive cocci?
Usually used for differentiating Lancefield groupings of Strep. Alpha haemolysis is utilized by group D strep (Sanguinis, mitis, pneumoniae, salivarius), Beta by group A, B, and C strep, and gamma sometimes present in group D as well
Idenitfy the types of haemolysis
A - Beta haemolysis
B - Alpha haemolysis
C - Gamma haemolysis
What tests shouldone use to differentiate Staphyloccocus species?
Mannitol Salt, Novobiocin sensitivity, DNase, coagulase
Why is Mueller-hinton agar used for antibiotic susceptibility testing
Because it is a non differential medium and it contains starch, which can absorb toxins produced by bacteria (which may interfere with antibiotics)
Briefly describe the purpose of the Novobiocin susceptibility test
For differentiating coagulase-negative (Non S. aureus) Staph. Typically used to differentiate Staph. saprophyticis, which is resistant.
What does Mannitol Salt agar contain and what does it select for? How does it specifically select for S. aureus?
Contains 7.5-10% NaCl, which is inhibitory to most non-staph bacteria. Contains pH indicator phenol red - yellow indicates fermentation of mannitol.
S. aureus will have yellow halos around the growth on the plate.
What preliminary tests are used to differentiate Streptococcus species?
Bloodagar, bacitracin sensitivity, CAMP agar, bile esculin agar, 6.5% NaCl broth
Explain the CAMP test and what it differentiates
Identifies group B strep -looking for CAMP-factor. Group B strep like Strep. agalactiae will augment haemolysis by S. aureus, creating an arrow-shaped zone of clearing (when plated perpendicularly to S. aureus, within 1cm but not quite touching).
Explain the results seen on this Mannitol Salt agar. What would it mean if there were third and fourth organisms plated in the remaining quadrants that didn’t grow?
- S. aureus* is positive for fermentation of mannitol.
- S. epidermidis* is negative for fermentation of mannitol.
If no growth is found, it is likely not a pathogenic staphylococcus
Descibe these results of the CAMP test. What is organism C? What can you assume about organism A?
C must be S. aureus
A must be a group B Streptococcus like Strep. agalactiae
Describe the bile esculin test and what it differentiates
Used to differentiate Enterococcus (group D strep) and Strep. bovis. Bile salts select for group D strep. Esculin can be hydrolyzed by Enterococcus and becomes black from iron salts produced. Therefore, pos is black
What do the results on this Bile Esculin agar plate mean? What does this indicate about the organism on the left?
Organism on left is positive for hydrolyzing esculin. This result means it must be Group D strep (Enterococcus or S. bovis)
Describe 6.5% NaCl medium and what it differentiates
Differentiates Enterococcus from other group D strep. IF growth occurs (turbid), it is enterococcus.
What tests are generally used to differentiate between Streptococcus mitis and Streptococcus pneumoniae?
Bile solubility, negative stain, optochin sensitivity test
Describe the bile solubility test, how it is performed and what it differentiates
Performed by inoculating tubes of equal amounts of sterile saline with a bacterial culture. Then, 1mL bile salt is added to one and 1mL of sterile saline is added to the other as a control. It is heated at 37 celcius on a heat block for one hour. Turbidity indicates growth, which means it is bile soluble (bile salt lyses cell wall)
What does the bile solubility test mean when differentiating S. mitis and S. pneumoniae
S. pneumoniae is a positive (bile soluble)
Why is a negative stain performedto differentiate S. pneumoniae and S. mitis?
S. pneumoniae has a capsule, which will show up under negative stain
Why is optochin sensitivity testing used to differentiate S. pneumoniae and S.mitis
S. pneumoniae is the only sensitive Streptococcus species
What is the purpose of an Acid-fast stain? What cellular mechanisms allow the acid fast stain to work?
To detect cells that are capable of retaining a stain when treated with an acid alcohol. It is often used to differentiate* Mycobacterium*. Very few organisms are acid-fast so it is primarily used when infection with *Mycobacterium (either tuberculosis *or leprae) is suspected. They are also used on patients with TB to determine how well drugs are working.
Mycolic acid is a waxy substance on the cell walls of acid fast organisms, which gives them such a high affinity for primary stain that even acid does not decolorize it
Describe each step of the Ziel-Neelsen acid-fast stain
- Prepare methanol fixed slide of suspected Mycobacterium and a known non-acid fast bacteria like S. aureus
- Place slide over boiling beaker of water and put a small square of paper towel over it
- Apply primary stain - carbol fuchsin for 5 minutes. Re-apply regularly to prevent drying
- Allow slide to cooland rinse with water
- Add acid alcohol dropwise until runoff is almost clear, rinse with water
- Apply methylene blue counterstain for 2 minutes, rinse
- Blot in bibulous paper and view.
Describe these acid-fast stain results
A is non-acid fast
B is acid fast, could be Mycobacterium
How does the Kinyoun method of acid-fast staining differ from the one we used?
There is no heat applied, but instead a stronger carbol-fuchsin mixture is used.
What dilution is achieved if someone transfers 1 mL of a 10-1 food sample into 99mL of sterile water?
A 10-3 dilution
How can one use 100mL of a 10-3 dilution to create 10-3 and 10-4 agar pour plates?
Use 1mL of sample on one agar plate (results in 10-3), and 0.1mL of sample on the other (results in 10-4)
What is the standard plate count equation
of colonies on plate/dilution factor of sample x volume plated (mL) = CFU/mL of original sample
What was used in the lab asan alternative to Salmonella-Shigella agar?
Brilliant Green
What does Brilliant Green agar contain and what does it select for?
Selects for *Salmonella *(non typhoid). Both *Salmonella *and *E. coli *will grow on the medium, they just produce completely different results. It contains a pH indicator, bile salts, and brilliant green dye. Brilliant green inhibits gram positives and most gram negatives. It contains lactose and sucrose, and if those are fermented by the organism (ex. E. coli) it will turn the medium green-yellow. Salmonella species will remain white, pink, or red.
Describe these results on Brilliant Green agar
A - Lactose fermentor, maybe E. coli
B - Non-lactose fermentor, possible a Salmonella species
Describe the components of CAMPY (Campylobacter blood) agar and what the purpose is. What is unique about its incubation? Why do you think we do this?
A medium that functions specifically to identify *Campylobacter *(especially C. jejuni) infections. It contains antibiotics such as trimethoprim to inhibit other enteric bacteria.
It must be incubated in 5% O2, 10% CO2.
This is likely because that is closer to the environment of the large intestine
What is the purpose of Endo agar and what does it contain?
Used to detect fecal contamination in water/dairy. Usually used to identify enteric lactose fermentors. It inhibits gram positives. Lactose fermentors will appear slightly red/pink. Lactose non-fermentors appear colourless or pink. If large amounts of acid are produced during lactose fermentation (ex. E.coli), the growth will have a metallic seen.
Describe these Endo agar results
A - Lactose fermentor
B - Strong lactose fermentor (like maybe E. coli)
C - Non-fermentor
What colour will *Salmonella *be on Endo agar?
Colourless
Describe Kenner Fecal agar and what it differentiates?
Selects for fecal streptococci. Gram negatives are suppressed, and it contains a pH indicator. Positive results are red/pink
Where are fecal streptococci found?
In animals
What does MacConkey agar contain? What does it differentiate?
Used to isolate and differentiate members of the *Enterobacteriaceae *based on lactose-fermentation. Has crystal violet to inhibit gram positives. pH indicator is pink when acidic (aka when lactose has been fermented)
Describe these MacConkey agar results
1 and 2 are lactose fermentors. 4 is a lactose non-fermentor (still gram neg) and 3 is likely a gram positive organism
What is MacConkey agar + Sorbitol used for?
To differentiate pathogenic E. coli strains from nonpathogenic strains. Pathogenic strains do not ferment sorbitol and are therefore colourless
What is the purpose of Pseudomonas F agar and what does it contain? What procedure is used to analyze the results?
Is a selective and differential medium for identifying nonfermenting gram negs such as *Pseudomonas *species. In low-iron environments, *Pseudomonas *species can create a fluorescent pigment called fluorescin, which will show up under UV light (as a green/blue glow). The antibiotic triclosan is used to inhibit many gram pos and neg species.
What is the purpose of Eosin Methylene Blue agar? What does it contain?
Used for isolation of fecal coliforms. Dyes inhibit growth of gram positives, agar contains lactose. Lactose fermenters will be pink, non-lactose fermenters willbe their normal colour, and vigorous lactose fermenters will have a metallic green sheen.
Describe these results on EMB agar
A - Lactose negative result
B - Lactose positive result
C - Strong lactose positive result
A positive result on the oxidase test is indicated by?
Paper turning purple after 30 seconds
What does litmus milk contain? What are the potential results and what do they mean?
Litmus milk contains lactose, casein and litmus (a pH indicator that is purple at neutral, blue in bases and pink in acids).
Pink colour = Lactose fermented
Blue colour = lactose not fermented but proteins metabolized
Coagulated curd formed = casein digested
Brownish liquid = casein completely broken down (protealysis)
White colour = litmus reduced
What are the results of tests A, B, and C for glucose fermentation?
A - Negative
B - Positive, acidic
C - Positive, acidic, gas bubble (CO2) produced
Label each of these Litmus milk results as positive or negative for lactose fermentation. Are they alkaline or acidic?
A - Acidic, positive
B - Alkaline, negative
Explain the results of each of these litmus milk tests.
A - Alkaline, negative for lactose fermentation
B - Acidic, positive for lactose fermentation
C - Alkaline, negative for lactose fermentation
D - Positive for casein digestion (protealysis)
E - Positive for casein digestion and lactose fermentation (acidic)
D - Positive for casein digestion, lactose fermentation and breakdown of litmus
What does the methyl red test test for? How does one perform this test? What indicates a positive or negative result?
Mixed-acid fermentation of glucose. Grow bacteria in MR-VP broth and then mix in 5 drops methyl red.
Red colour = positive
Remaining yellow = negative
What is a Negative stain and what stain should be used?
A simple stain that stains the background of the slide without actually staining the cell.
Nigrosin.
What is the procedure for a negative stain?
Place a small drop of Nigrosin on the slid containing the sample.
Take a cover slide, tilt it 45º and spread across the slide.
Let air dry
What does the Triple Sugar-Iron agar slant contain? What does an uninoculated slant look like? What do the varying results mean?
Contains 1% lactose, 1% sucrose, and 0.1% glucose, peptones, pH indicator phenol red.
Uninoculated look orange all the way up.
Yellow = acidic, red = alkaline
Slant + Butt acidic = only ferments lactose and sucrose
Slant alkaline (red), butt acidic (yellow) = only ferments glucose
Slant alkaline, butt has no change = only ferments peptones aerobically
Slant and butt alkaline = organism can ferment peptones aerobically and anaerobically
Whole slant raised in tube = gas production
If there is any black in the tube it is likely Salmonella
How is a nitrate reduction test done? Describe the possible results and what they mean.
5 drops sulfanilic acid plus 5 drops alpha-naphthylamine. If the broth turns red, that means the bacteria can convert nitrates to nitrites. If it does not, you must add a small amount of zinc. If it stays clear, that means the bacteria can convert nitrates to nitrogen or ammonia
What is a positive result in the urea broth? What does that mean and what causes it?
Positive is pink. pH indicator is phenol red, indicating an alkaline reaction