Lab Bio 150 Flashcards
What is a character state?
e.g # of petals in a flower might be a character, but state would be stating 3,4, or 5 petals
Convergent similarity (convergence)
Results from a similar character appearing independently in unrelated evolutionary lineages. Ex/ Wings on birds and insects
–> Convergent trait called HOMOPLASY
Derived similarity
Happens when a new trait evolves and is then shared by the descendants. Results from a shared evolutionary history, but it differs from the ancestral trait. Ex/ mammals developing fur and their descendants followed.
–> Derived traits are also called SYNAPOMORPHIES (new shape)
Homologous (Homologies)
Similar structures or traits have been modified to have different functions in different lineages, such as whale flippers, bat wings, and human arms
–> Homologous traits can also be synapomorphies
Ancestral similarity
The presence of a character that is shared by all descendants of the group of organisms under study, also as a consequence of a shared evolutionary history. Ancestorial characters found on ALL members of group, so not much insight on relationships among a group.
–> Ancestral characters that don’t provide evolutionary meaningful information called PLESIOMORPHIES (old shape)
Monophyletic group (one race)
group of organisms that includes the most recent common ancestor and all of its descendants
Polyphyletic group (many race)
an investigator groups organisms based on convergent traits. Ex/ Wings
Paraphyletic group (beside race)
group that includes the most recent common ancestor and most BUT NOT ALL of its descendants
Outgroup
group of organisms that is related to the group we suspect is monophyletic but not part of that group. The outgroup allows us to determine directionality of changes in character states.
Ex/ most mammals give live birth, but few lay eggs. If birds or reptiles are used as outgroup, conclude that egg laying is ancestral since birds and reptiles lay eggs along with some (but not all) mammals.
Ingroup
All members of the ingroup are more closely related to each other than to the outgroup. The ingroup is the focus of the phylogenetic study.
Principle of Parsimony
states that the simplest among competing hypotheses is more likely to be correct
Gram +
- LOW cell wall complexity
- Peptidoglycan layer THICK
- No presence of outer membrane
- PURPLE
- Description of Cell Wall: Simple, couple layers of peptidoglycan
Gram -
- HIGH cell wall complexity
- Peptidoglycan layer THIN
- Presence of outer membrane
- PINK
- Description of Cell Wall: complex, Lipopolysaccharides (outer layer?), Porin
Colony Shape
- Punctiform (looks like dots)
- Round (“perfect” circle)
- Filamentous (looks like ink dropped on page)
- Irregular (more circular shaped but not “perfect”)
Colony Margin
Edge of shape:
- Smooth
- Circled (mini ridges/dents)
- Wavy
- Lobate (uneven dents/ridges)
- Filamentous (looks like fireworks, ink)
Colony Surface
- Punctiform (all around same texture, “perfect”)
- Concentric (Rings, Hypnosis)
- Wrinkled
- Contoured (Uneven, warped looking rings)
Basic Forms of Bacteria
- Bacilli (Rod-shaped)
- Cocci (Spherical, mini circles)
- Spirilli (Spiral-shaped)
Amoebozoa
Amoeboid form ALL BELOW:
- Loboses amoebae
- Cellular slime molds
- Plasmodial slime molds (Supercell)
Opisthokonta
- Fungi
- Choanoflagellates
- Animals
Excavata
Loss of mitochondria ALL BELOW:
- Parabasalids
- Diplomonads
- Euglenids
- Kinetoplastids
Plantae
Chloroplasts ALL BELOW:
- Glaucophyte algae
- Red algae
- Green algae (Green plants)
- Land Plants (Green plants)
Rhizaria
Rhizarian amoeboid form ALL BELOW:
- Actinopods
- Foraminiferans
- Chlorarachniophytes
Alveolata
Alveoli ALL BELOW:
- Ciliates
- Dinoflagellates
- Apicomplexans
Stramenopila
“Hairy” flagellum ALL BELOW:
- Water molds
- Diatoms
- Brown algae
Amoebozoa
CLADE: Amoebozoa
LOCOMOTION: Cytoplasmic streaming
HABITAT: Freshwater, soil, animal intestines, and animal nasal passages
MODE OF NUTRITION: Heterotroph
Stramenopila
CLADE: Stramenopila
LOCOMOTION: Flagella
HABITAT: Marine
MODE OF NUTRITION: Autotroph