Lab 5 - Biofilms, Quorum Sensing, and Bacterial Transformation Flashcards

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1
Q

What is a biofilm?

A

It is a complex aggregate of microbes that adhere to each other and to almost any surface (substrate) exposed to moisture, especially if there is another source of nutrition.

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2
Q

What are some examples of surfaces where biofilms can form?

A

Soil particles, water/sewage pipes, contact lenses, teeth, the throat, shower curtains, etc.

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3
Q

How can biofilms be beneficial?

A

Water purification and nutrient cycling.

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4
Q

What is a biofilm composed of?

A

Many different types of bacteria embedded within a self-produced matrix of spine, which is composed of extracellular polysaccharide, proteins, lipids, and DNA.

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5
Q

What is a planktonic bacteria? How do they differ from biofilm bacteria?

A

“Free floating” bacteria

They have different genes turned on, etc.

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6
Q

What sorts of things can affect gene regulation?

A

Cell density, specific cell surface attachment, temperature, types of nutrient, and sub-inhibitory concentrations of antibiotic

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7
Q

What is quorum sensing?

A

A type of gene regulation that depends on cell density.

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8
Q

What bacteria use quorum sensing?

A

P. aeruginosa, S. aureus, B. pertussis, and V. cholera

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9
Q

Why is the link between biofilms and quorum sensing important?

A

Inhibition of invasion until there are enough cells

And protection from antibiotics

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10
Q

What is transformation?

A

The genetic alteration of a cell resulting from the direct uptake and incorporation and expression of exogenous DNA from its surroundings.

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11
Q

Describe one way a superbug can be formed.

A

Since bacteria lyse in the biofilm, they release their DNA. This could cause bacteria to take up the DNA and potentially incorporate several virulence factors into its genome and then express them.

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12
Q

How can bacteria be protected from antibiotics?

A

By being part of a biofilm

Uptake of plasmids from environment

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13
Q

What is a plasmid?

A

Autonomously replicating circles of DNA

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14
Q

What is an R plasmid?

A

A plasmid that can make a bacterium resistant to an antibiotic

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15
Q

What kind of bacteria did we use when we transformed E coli to be bioluminescent? Why?

A

Bacteria in the log phase.

Because in the log phase, they are more susceptible to inducing competence.

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16
Q

What does the control plate tell us?

A

It tells us if there even are any bacteria that can grow in the solution, as they went through a lot. The control plate has no antibiotic on it so something should grow.

17
Q

What does transformation efficiency tell us?

A

The efficiency for which the cells can take up extracellular DNA, so it tells us how competent the cells are.