L17 bacterial nutrition Flashcards
Bacterial Metabolism is relevant because it
–defines the preferred environment
–facilitates identification
–reveals methods for killing or suppressing bacteria
Clostridium botulinum exotoxin
causes disease since the bacteria does not grow well in the body, can spread from a site of infection or improperly prepared food
Clostridium perfringens
produces enterotoxin which does not usually severely harm the host however it allows for the spread of spores through diarrhea
TYPE III SECRETORY SYSTEM
an organelle of virulence found in gram negative bacteria.
injects virulence factors into host cells, the virulence factors can then reprogram and compromise many aspects of the host cell.
Pure culture technique
Fundamental method of analyzing bacteria. differences
between colonies allow many pathogens to be identified. Bacteria are spread so that individual bacteria grow in distinct colonies. Different species have different colony morphologies
variables affecting growth rate of bacteria
- The nature of the culture medium and the presence of any appropriate supplemental nutrients
- The presence or absence of oxygen
- The temperature
4 phases of growth in liquid culture
- lag phase - no growth
- exponential phase - consistent growth (max as quick as 20min)
- Stationary phase - growth=death
- death phase - death > growth
DNA gyrase
normally relieves coiling during DNA replication, differ between eukaryotes and prokaryotes therefore are a good target for drugs such as -novobiocin and synthetic quinolones which inhibit gyrase.
Protein synthesis
Amino acids are joined together in a chain according to
instructions provided by mRNA. This occurs within the ribosome, a complex molecular machine composed of RNA and protein.
The ribosome is the target of a very large group of antibiotics, including erythromycin, tetracycline’s, streptomycin and spectinomycin.
Peptidoglycan synthesis
Production and assembly occurs in three separate
compartments in the cell.
a. The subunits of peptidoglycan are synthesized in the cytoplasm.
b. These subunits are transferred across the membrane by a carrier molecule.
c. The newly transferred subunits are cross linked to the peptidoglycan already present on the other side of the membrane.
drugs inhibit peptidoglycan synthesis at any of the above stages
penicillin-binding proteins
make and break these crosslinks during peptidoglycan maturation, an activity that is critical to cell growth.
are inhibited by penicillin.
A pathogens process of metabolism can tell you
- its requirements for energy production and therefore preferred environment and where an infection is most likely to occur
- identification based on preferred energy sources
- production of toxic by-products during respiration (oxygen radicals) and so they must also produce protective enzymes (peroxidase, superoxide dismutase)
3 major steps in the production of energy
- nutrient molecules enter the cell
- they are broken down and partially converted to energy
- fermentation or respiration -removes more energy
Siderophores
molecules secreted by bacteria that trap iron, and which can be transported back into the bacterium. Some siderophore genes are on plasmids and these plasmids are virulence factors.
(iron is required for many bacterias to grow)
Central metabolic pathways
the initial breakdown of nutrient molecules,
occurs before respiration (electron transport and then
oxidative phosphorylation) or fermentation.
Respiration
highly efficient stepwise removal of energy (electron transport) that can be used to generate a gradient of protons across the bacterial membrane (oxidative phosphorylation).
The gradient can be used to power transport of molecule or rotation of the flagellum among other things.
Any drug treatment that impairs the integrity of the cell
envelope can destroy the gradient and kill the cell.
Fermentation
less efficient then respiration
produces organic molecules that can be used to diagnose the infecting orgamism
peroxidases
remove hydrogen peroxide from cells, a reactive oxygen species
superoxide dismutase
removes the supraoxide ion a reactive oxygen species
types of adaptive responses
- Spore formation. EX- by Bacilli and Clostridia are a response to a lack of nutrient by the formation of a dormant, resistant cell type. Spores can enhance or even be crucial for pathogenesis.
- Heat shock response, during which protective factors that allow the cells to survive increased heat and other stresses are synthesized. Heat shock conditions are probably commonly encountered during pathogenesis.
- SOS system which is induced to repair DNA damage when mutagenic conditions are encountered.
major targets of antibiotics
peptidoglycan synthesis DNA RNA polymerase cell membrane ribosomes