Introductory Concepts Flashcards
What is a distinguishing factor of Protein in Comparison to the other macronutrients?
Contains Nitrogen
Protein is a major ______ and _______ component of all cells
functional and structural
Protein in the human body is used for
1) All enzymes
2) Membrane components and carriers
3) Blood transport molecules
4) Intracellular matrices
5) Muscle, bone, skin, hair, fingernails
6) Keratin, collagen
7) Some hormones
The largest energy store in the body is ________.
Fat
The components of the body listed from highest to lowest is:
Body and Water Minerals –> Fat –> Protein –> Glycogen
Does fat or protein provide more energy?
Fat
What is the bioavailability in days of protein?
13 days
Can you use up all of your protein stores?
No, you would die
Humans eat protein, but need ________
amino acids
How many amino acids are there?
hundreds
α-amino acids except for proline (α-imino)
1) 20 with cognate tRNA
2) tRNA for selenocysteine
What is post transcription?
Adding a hydroxy or methyl group after the AA becomes apart of the chain
Most of our amino acids are what kind of amino acids?
α-AA
Non-Protein α-AA’s (6)
Ornithine Citruline Homocysteine Hydroxylysine Hydroxyproline 3-methyl-histidine
Not an α-AA
Taurine
beta-alanine
Protein contains ______ % Nitrogen by weight
16%
Weigh ratio of protein/nitrogen (p/n)
6.25
100g protein = 16g nitrogen
100/16 = 6.25
So,
Nitrogen (g) x 6.25 = _________
Grams of Protein
Amino acids are linked together via ______ to form _____
Peptide Bonds(linkages), Peptide Chains
Protein Structure can be
Primary
Secondary
A Secondary Protein Structure forms a ______ ______
double helix
Why does a helical structure form?
The hydrogen bonds are not very strong, so it results in a winding structure
The Amino end is also called the __ - _____ ____ and is on the ______ side
N-terminal end, left
H3N+
The Carboxyl end is also called the __ - _____ ____ and is on the ______ side
C-terminal end, Right
COOH
C=0
=0-
The total effect of AA’s is ______
neutral
Peptide bonds form between….
Carboxyl group of one AA and the Amino group of another AA
__ - Amino acids are of nutritional significance
L
Indispensable (essential) AA’s
Need to attain from diet
Isoleucine (Ile) Leucine (Leu) Lysine (Lys) Methionine (Met) Phenylalanine (Phe) Threonine (Thr) Tryptophan (Trp) Valine (Val) Histidine*(His)
Dispensable (non-essential)
Can be synthesized in the body
Alanine (Ala), Arginine (Arg), Aspartic acid (Asp) Asparagine (Asn) Glutamic acid (Glu) Glytamine (Gln) Glycine (Gly) Proline (Pro) Serine (Ser)
Conditionally dispensable
Synthesis may be limited under special physiological conditions
Cysteine (Cys)
Tyrosine (Tyr)
Hadaad Notes
Structural formulas of the 21 common α-amino acids.
The α-amino acids all have a carboxyl group, an amino group, and a differentiating functional group attached to the α-carbon.
The generic structure of amino acids is shown in the upper left corner with the differentiating functional group marked by R.
The functional group for each amino acid is shown below. Amino acids have been grouped by functional class.
Proline is actually an imino acid because of its cyclic structure involving its nitrogen (N).
What is the structure of Amino Acids
1) α-amino group (NH2)
2) α-carboxyl (COOH)
3) Side Chain (R)
Neutral (non-polar AA)
4
Glycine (Gly) (3 sections) - Alanine (Ala)
Serine (Ser) - Threonine (Thr): Both have an OH group, but Thr has an extra branch
Glycine is the simplest
Threonine = secondary alcohol because the main CHCH has two branches coming off of it
Neutral non-polar Branched AA)
3
BCAA’s: serve as an energy source for muscle, all essential
Isoleucine (Ile): 5 carbon chain, not a “V” branch
Valine (Val): If turn your head on teh side it forms a “V” shape, but also has a NH2, 3 carbon chain
Leucine: Almost the same as Valine, but its downward branch has an NH3, 4 carbon chain
Sulfer Amino Acids
2
Contain a Sulfer!
Cysteine (Cys): Conditional, “HS” on the amino end
Methionine (Met): Secondary thiol, S is sandwiched between CH3 and CH2CH2CH
Aromatic Amino Acids (Phenols)
Contain a Benzene ring structure (C6H5OH) .The molecule consists of a phenyl group (−C6H5) bonded to a hydroxyl group (−OH)
Phenylalanine (Phe):
Tyrosine (Tyr): Same as Phe, but has a hydroxyl group
Phe and Tyr have what kind of ring?
Phenol Ring
Aromatic Amino Acids: Tryptophan (Trp)
Indole ring (double ring)
Aromatic Amino Acids: Histidine (His)
- Imidazole ring
- One ring present with two double bonds
Formula (CH)2N(NH)CH
What are all of the Aromatic AA’s?
4
Phe
Tyr
Trp
His
Basic Amino Acids
2
When put in water they become more Basic
Lysine (Lys):
- primary amine - straight chain with one NH2 downward branch
Arginine (Arg):
- Has a guanidino group
- H2N – C –NH
(downward form C is a = NH2+)
Body Protein Reserves
Skeletal muscle: 43% Skin: 15% Blood: 15% Viscera (liver, kidneys) organs:10% Rest in brain, lung, heart, etc
50 % of total protein in the body is in the following forms:
1) Collagen
2) Myosin and actin
3) Hemoglobin
Collagen
Structure of connective tissue of skin & bone
Myosin and Actin
Proteins in muscle
Hemoglobin
Blood
Acidic amino acids and their amides
- Glutamic acid (glutamate) is longer than Aspartic acid (aspartate)
- Glutamate –> Glutamine
- Aspartate –> Asparagine
This occurs when the acid form takes up an amino group
- Acidic amino acids have 2 carboxyl groups, one at each end
What is protein turnover?
- Body proteins are constantly being synthesized and then degraded
- In healthy adults, the total amount of protein in the body remains constant
- The rate of protein synthesis sufficient to replace the protein that is degraded is protein turnover
- Plasma proteins and most intracellular proteins are rapidly degraded (1/2 life = hours to days). Extracellular structural proteins such as collagen are metabolically stable and have half-lives of years.
EXTRA:
Albumin, Transferrin have a short half life and are broken down faster
- Proteins in muscle may have a longer half life
- Protein turnover mostly happens in visceral
Turnover = about 250g per day
Amino Acid Pool
1) The free amino acids distributed throughout the body
- Intracellular
- Extracellular: Blood, fluid between cell
2) The amino acid pool contains about 90 - 100 g of amino acids
How much protein is digested and absorbed per day?
- Protein intake (dietary) = 90 g (70-100g)
- Secreted protein or endogenous (from body to gut) = 70 g (35-200g)
- Absorbed = 150 g
- Fecal loss = 10 g (6-12g)
What two types of cells does the stomach contain?
Secrete Chief cells and Parietal (oxyntic) cells
What do chief cells secrete in the stomach?
pepsinogen, which is an inactive form: zymogen
What do parietal (oxyntic) cells secrete in the stomach?
HCl (pH 2-3) - Denatures protein - Kills microorganisms - Activates pepsinogen --> pepsin (active form( Intrinsic factor
What percent of protein digestion occurs in the stomach
about 10-20%
- Results in oligopeptides, polypeptides and amino acids
Most protein digestion results from the action of
pancreatic proteolytic enzymes
Hadaad Notes:
The proteolytic enzymes are all secreted in an inactive form, to prevent auto-digestion, and are activated in the lumen of the gut: by HCl in the case of stomach pepsinogen and by enteropeptidase and trypsin in the case of the pancreatic enzymes.
What stimulates the pancreas to secrete its enzymes?
The intestinal endocrine cells secrete:
Cholecystokinin (CCK) and Secretin
-CCK and secretin stimulate the pancreas to secrete - the protein digesting enzymes. However, the - pancreatic enzymes are secreted as zymogens (inactive forms) such as trypsinogen, chmotrypsinogen, proelastase, procarboxypeptidase, etc.
How are the pancreatic enzymes activated?
CCK stimulates the mucosal epithelial cells to secrete enteropeptidase which which activates trypsinogen to trypsin. The other pancreatic enzymes are activated by trypsin
Brush border enzymes (intestinal peptidases)
The intestinal brush border has: \_\_\_\_\_, \_\_\_\_\_, \_\_\_\_
Dipeptidases
Tripeptidases, and
Aminopeptidases
Brush border enzymes (intestinal peptidases)
Absorption of peptides and whole proteins
Rare
Brush border enzymes (intestinal peptidases)
\_\_\_\_\_\_ peptides may be absorbed intact and hydrolyzed within intestinal cell
Small
Action of Peptidases: Endopeptidases
Hydrolyze bond (cleave) in the middle of the chiain
Action of Peptidases: Exopeptidases
Hydrolyze bond (cleave) at the terminal end of the chain, either at the Aminopeptidase end of the caboxypeptidase end
Transport (absorption) of amino acids: Transport systems
What are amino acid transporters?
Membrane bound proteins that recognize different amino acids and move them into and out of cells
Transport (absorption) of amino acids: Transport systems
The ______ _______ and ______ _______have common transport systems
Small intestine and Kidney Tubules
What are the two types of Transport Systems?
1) Sodium independent
2) Sodium dependent
-Co-transport (secondary active transport) of amino acids
and peptides