Introduction to clinical sciences Flashcards
What are the 2 types of autopsy
Hospital Autopsy
Medico-legal Autopsy
What are hospital autopsies useful for, and what % of UK autopsies are they
Useful for audit, teaching, governance, research
10% of all UK autopsies
What are Medico-legal autopsies useful for, and what % of UK autopsies are they
Coronial autopsies – standard
Forensic autopsies – deaths involving crime
90% of all autopsies in the UK
What is presumed natural death (coroners)
Cause of death not known
Not seen by doctor with recent illness (last 14 days)
what is presumed iatrogenic death (coroners)
Peri/postoperative deaths
Anaesthetic deaths
Abortion
Complications of therapy
What are presumed unnatural deaths (coroners)
Accidents
Industrial death
Suicide
Unlawful killing (murder)
Neglect
Custody deaths
What is Inflammation
the local physiological response to tissue injury.
What are beneficial effects of Inflammation
Destruction of invading microorganisms
The walling off of an abscess cavity, thus preventing spread of infection
What are problems caused by inflammation
An abscess in the brain would act as a space-occupying lesion compressing vital surrounding structures
Fibrosis resulting from chronic inflammation may distort the tissues and permanently alter their function
What are the cells involved in inflammation
Neutrophils
Macrophages
Lymphocytes
Endothelial cells
Fibroblasts
Role of Neutrophils in inflammation
Short lived cells
First on the scene of acute inflammation
Cytoplasmic granules full of enzymes that kill bacteria
Usually die at the scene of inflammation
Release chemicals that attract other inflammatory cells such as macrophages
Role of Macrophages in inflammation
Long lived cells (weeks to months)
Phagocytic properties
Ingest bacteria and debris
May carry debris away
May present antigen to lymphocytes
What are the names of macrophages based on location (liver, skin, bone, brain.)
Kupffer cell (liver), melanophage (skin), osteoclast (bone), microglial cell (brain)
Role of Lymphocytes in inflammation
Long lived cells (years)
Produce chemicals which attract in other inflammatory cells
Immunological memory for past infections and antigens
Role of Endothelial cells in inflammation
Line capillary blood vessels in areas of inflammation
Become sticky in areas of inflammation so inflammatory cells adhere to them
Become porous to allow inflammatory cells to pass into tissues
Grow into areas of damage to form new capillary vessels
Role of Fibroblasts in inflammation
Long lived cells
Form collagen in areas of chronic inflammation and repair
What is Acute Inflammation
the initial and often transient series of tissue reactions to injury
Sudden onset
Short duration
Usually resolves
What are the 3 processes of Acute inflammation
Vascular component: dilatation of vessels
Exudative component: vascular leakage of protein – rich fluid
Neutrophils recruited to the tissue
What are the potential outcomes of Acute Inflammation
Resolution
Suppuration
Organisation
Progression to chronic inflammation
What is Resolution (acute inflammation)
the complete restoration of the tissues to normal after an episode of acute inflammation.
What is Supperation (acute inflammation)
(e.g. abscess) – the formation of pus, a mixture of living, dying and dead neutrophils and bacteria, cellular debris and globules of lipid.
What is Organisation (Acute inflammation)
the process whereby specialised tissues are repaired by the formation of mature fibrovascular connective tissue. It occurs by the production of granulation tissue and the removal of dead tissue by phagocytosis.
What are 6 causes of Acute Inflammation
Microbial infections e.g. viruses
Hypersensitivity reactions e.g. parasites
Physical agents e.g. trauma/ radiation
Chemicals e.g. corrosives/ acids
Bacterial toxins
Tissue necrosis e.g. ischaemic infarction
What is Chronic inflammation
the subsequent and often prolonged tissue reactions following the initial inflammatory response
Slow onset
Long duration
May never resolve
What are the causes of chronic inflammation
Primary chronic inflammation
Transplant rejection
Progression from acute inflammation
Recurrent episodes of acute inflammation
What are the main cells involved in chronic inflammation
macrophages, Lymphocytes, plasma cells
What are the main cells involved in Acute inflammation
Neutrophils
What are Granulomas
a collection of epithelioid histiocytes (macrophages).
What is Granulation tissue
repair phenomenon, it is loops of capillaries supported by myofibroblasts which actively contracts to reduce wound size, this may leave a structure present
What does Ibuprofen do?
inhibit prostaglandins synthetase, decrease inflammation
What are Prostaglandins
chemical mediators of inflammation
describe the process and recovery for Lobar pneumonia
Affects a lobe of the lung rather than the whole thing (bronchopneumonia)
Alveoli filled with neutrophil polymorphs (acute inflammation) rather than air
Pneumocyte that line the alveoli can regenerate so the lung can be regenerated – the pneumocytes divide and reline the alveoli
Describe what skin abrasions are and their process of healing
The most superficial skin wounds e.g. road rash
Normal skin -> abrasion -> scab formed over surface -> epidermis growing out from adnexa, produced by scab -> thin confluent epidermis -> final epidermal regrowth
What is healing by 1st intention for incised skin wounds
An incision causes very little damage to the tissues on either side of the cut, so if the two sides are brought together accurately the healing can proceed quite quickly.
1st intention – can suture up the cut
Incision -> exudation of fibrinogen -> weak fibrin join -> epidermal regrowth and collagen synthesis -> strong collagen join
What is healing by 2nd intention for tissue loss injuries
A tissue loss injury or another reason that the wound margins are not apposed requires another mechanism for repair.
Can’t bring the skin edges together the cut is too deep
Loss of tissue -> granulation tissue -> organisation -> early fibrous scar -> scar contraction
Phagocytosis to remove any debris
Granulation tissue to fill in defects and repair specialised tissues lost
Epithelial regeneration to cover the surface
What is repair (vs healing)
Initiating factor still present
Tissue damaged and unable to regenerate
Replacement of damaged tissue by fibrous tissue
Collagen produced by fibroblasts
What cells don’t regenerate
Myocardial cells
Neurones
What cells regenerate
Hepatocytes
Pneumocytes
All blood cells
Gut epithelium
Skin epithelium
Osteocytes – help remodel bone fractures
Why are blood clots rare in normal physiology
Laminar flow – cells travel in the centre of arterial vessels and don’t touch the sides
Endothelial cells which line vessels are not ‘sticky’ when healthy
Define Thrombus
solid mass of blood constituents formed within intact vascular system during life
What are the steps of thrombus formation
- Damage to endothelial cells in the vessel causes some of the cells to lift away from the vessel wall, exposing collagen.
- Platelets then begin to stick to this exposed collagen, and release the chemicals which cause platelet aggregation. Platelet aggregation also starts off the cascade of clotting proteins in the blood.
- Red blood cells then get trapped within the aggregating platelets
- Clotting factors join the red blood cells and platelets, and the clotting cascade forms a large protein molecule fibrin, which then gets deposited and forms the clot.
- Positive feedback loop -> can end up causing a thrombus (thrombosis), blocking the artery
What is the Virchow triad
the causes of thrombosis:
Change in vessel wall
Change in blood flow
Change in blood constituents
How does low dose Aspirin work
Low dose aspirin inhibits platelet aggregation, so this can be prescribed to reduce the risk of thrombosis.
Define Embolism
the process of a solid mass in the blood being carried through the circulation to a place where it gets stuck and blocks the vessel
define Embolus
mass of material in the vascular system able to become lodged within a vessel and block it
What are the common types of embolus
Usually caused by a thrombus from a blood vessel
Air
Tumour
Amniotic fluid (rare in pregnant women)
Fat (severe trauma with fractures)
define Ischaemia
reduction of blood flow to a tissue, reducing perfusion but not causing cell death
define Infarction
a reduction of blood flow to a tissue that is so reduced that it cannot even support mere maintenance of the cells in that tissue so they die
define End artery supply
an organ that only receives blood supply from one artery.
Why is end arterial supply problematic
As when a blood clot forms,the whole blood supply to that organ is cut off leading to infarction.
Atheroma
degeneration of the walls of the arteries caused by accumulated fatty deposits and scar tissue, and leading to restriction of the circulation and a risk of thrombosis.
Define Apoptosis
programmed cell death
Apoptosis in cancer
lack of apoptosis – mutated p53 gene producing faulty p53 protein, p53 gene important in apoptosis
Apoptosis in HIV
too much apoptosis – kills the antibodies in the blood so the body can’t defend itself.
What is apoptosis triggered by
DNA damage such as:
Single-strand break
Base alteration
Cross-linkage
define Necrosis
death of most or all of the cells in an organ or tissue due to disease, injury, or failure of the blood supply
Name 5 clinical examples of necrosis
Toxic spider venom
Frostbite
Cerebral infarction
Avascular necrosis of bone – femur has single arterial supply through the neck of the femoral head
Pancreatitis
define Hypertrophy
increase in size of a tissue cause by an increase in size of the constituent cells
(the size of the cell/tissue/organ increases without an increase in the number of cells)
define Hyperplasia
increase in size of a tissue caused by an increase in number of the constituent cells
define Atrophy
decrease in size of a tissue caused by a decrease in number of the constituent cells or a decrease in their size
define Metaplasia
change in differentiation of a cell from one fully-differentiated type to a different fully-differentiated type
define Dysplasia
imprecise term for the morphological changes seen in cells in the progression to becoming cancer
What change caused by cell division causes ageing
telomeres get shorter after each cell division – limiting the amount of division that can occur (hence ageing occurs)
What is Dermal elastosis
Accumulation of abnormal elastic in the dermis of the skin
Result of prolonged/ excessive sun exposure – photoaging
UV light causes protein cross-linking
What is Cataracts
Result of the formation of opaque proteins within the lens which usually also results in a loss of lens elasticity
UV-B light causes protein cross-linking
Define Carcinogenesis
the transformation of normal cells to neoplastic cells through permanent genetic alterations or mutations
What is the difference between oncogenesis and carcinogenesis
Oncogenesis applies to benign and malignant tumors, carcinogenesis applies only to malignant
what are carcinogens?
Agents known or suspected to cause cancer, they act on DNA so are Mutagenic
Define Oncogens
Agents known or suspected to cause tumours
Give 2 examples of occupational risks for cancer
Scrotal cancer – increased incidence in chimney sweeps
Bladder cancer – increased incidence in aniline dye and rubber industries
what are the 5 classes of Carcinogens
Chemical
Viral
Ionising and non-ionising radiation
Hormones, parasites and mycotoxins
Miscellaneous
What are pro-carcinogens and ultimate carcinogens
Chemical carcinogens pre and post metabolic conversion
most chemical carcinogens require metabolic conversions
What are three examples of groups affected by radiation carcinogens
Skin cancer in radiographers
Lung cancer in uranium miners
Thyroid cancer in Ukrainian children
What are the 5 classes of Host factors for cancer
Race
Diet
Constitutional factors
Premalignant conditions
Transplacental exposure
What % of cancer risks are inherited
15%
give 2 examples of how race affect cancer risk
Decreased skin cancer in black people (melanin)
Increased oral cancer in India, SE Asia (reverse smoking)
How do constitutional factors affect cancer risk
Age – incidence increases with age
Gender – breast cancer F:M = 200 (more common in women)
Define tumour
any abnormal swelling e.g. neoplasm, inflammation, hypertrophy, hyperplasia
Define Neoplasm
a lesion resulting from the autonomous or relatively autonomous abnormal growth of cells which persists after the initiating stimulus has been removed – a new growth.
(all neoplasms are tumours but not all neoplasms are tumours)
What are the 3 classifications of Neoplasms
Benign
Borderline
Malignant
How can Neoplasms cause morbidity and mortality
Pressure on adjacent structures
Obstruct flow
Production of hormones
Transformation to malignant neoplasm
Anxiety
How can malignant neoplasms cause morbidity and mortality
Destruction of adjacent tissue
Metastases
Blood loss from ulcers
Obstruction of flow
Hormone production
Paraneoplastic effects
Anxiety and pain
define Papilloma
benign tumour of non-glandular, non-secretory epithelium
Define Adenoma
benign tumour of glandular or secretory epithelium
Define Carcinoma
malignant tumour of epithelial cells
4 examples of how benign connective tissue neoplasms named
Lipoma – adipocytes
Chondroma – cartilage
Osteoma – bone
Angioma – vascular
What are solid neoplasms composed of
Solid Neoplasms are composed of neoplastic cells and stroma (supporting network of cells)
Give 2 examples of Benign neoplasms
Fibroid
Tubulovillous adenoma
give 2 examples of Malignant neoplasms
Prostate cancer
Squamous cell carcinoma
define Carcinoma in situ
a malignant epithelial neoplasm that has not yet invaded through the original basement membrane
define Invasive carcinoma
a carcinoma that has breached the basement membrane – it can now spread elsewhere
define Micro-invasive carcinoma
has breached the basement membrane but hasn’t invaded very far away from the original carcinoma
what is the process of invasion
neoplastic cells spread directly through tissue and gain access to blood vessels and lymphatic channels
What is invasion dependent on
decreased cellular adhesion,
abnormal cellular motility
the production of enzymes with a lytic effect on the surrounding tissues
What is metastasis
Process by which a malignant tumour spreads from its primary site to produce secondary tumours at distant sites
what routes can metastasis occur through
via blood vessels, lymphatics, across body cavities, along nerves or as a result of direct implantation of neoplastic cells during a surgical procedure
What are the 7 steps of the metastatic cascade
Detachment
Invasion
Intravasation
Evasion of host defences
Arrest
Extravasation
Vascularisation
What is the maximum diameter a tumour can grow before it requires vascularisation
1mm
Name two angiogenesis promoters
Vascular endothelial growth factors
Basic fibroblast growth factor
Name 3 types of angiogenesis inhibitors
Angiostatin, endostatin, vasculostatin
What is Haematogenous metastsis
The route of metastasis by the blood stream – forms secondary tumours in organs perfused by blood that has drained from a tumour
What is lymphatic metastasis
the route of metastasis by lymph channels – form secondary tumours in the regional lymph nodes
What is Trans-coelomic metastasis
rputeof tumour metastasis across cavities such as pericardial and peritoneal cavities
Which tumours commonly metastasise to the lung
sarcomas and any common cancers
Which tumours commonly metastasise to the liver
colon, stomach, pancreas, and carcinoid tumours of intestine
which tumours commonly metastasise to bone
prostate, breast, thyroid, lung and kidney
Name two treatment options for breast cancer
Anti-oestrogen drugs
Herceptin
Why and when to use anti-oestrogen drugs for breast cancer
Giving drugs that block the oestrogen receptors on the cancer cells which inhibits their growth. The tumours are stained in the lab for oestrogen receptors so that oncologists can decide whether a breast cancer is likely to respond to anti-oestrogen therapy.
why use herceptin for breast cancer
Herceptin is a drug that binds to the Her2 protein on the outside of the cell membrane.
Tumours overexpress a growth factor receptor on their cell surface called Her2 protein. This is coded for by the HER2 gene.
This drug binding to the protein on the surface of the cancer cells reduces their rate of growth
What is the main requirement of the immune system
to discriminate self from non-self
What are the 2 categories of immunity
Innate immunity
Adaptive immunity
What is innate immunity
non-specific, instinctive, does not depend on lymphocytes
What is adaptive immunity
specific ‘acquired’ immunity, requires lymphocytes, antibodies
Is made up of cells and soluble proteins (humoral)
What is the stem cell that every blood cell in the body originates from
Haematopoietic pluripotent stem cell (haemocytoblast)
What are Polymorphonuclear leukocytes
Cells with multi-lobed nuclei-
neutrophils, eosinophils and basophils
What are Mononuclear leukocytes
Cells with single-lobed nuclei-
monocytes (kidney shaped nuclei), T-cells and B-cells (lymphocytes)
What is the role of Neutrophils in immunity
Plays an important role in innate immunity (phagocytosis)
2 main intracellular granules
Primary lysosomes – can kill microbes by secreting toxic substances
Secondary granules- may have regulatory functions outside the cell
Role of Monocytes in immunity
Plays an important role in innate AND adaptive immunity (phagocytosis and Ag presentation)
Differentiate into macrophages in the tissues
Main role – remove anything foreign (microbes) or dead
Role of Macrophages in immunity
Play important role in innate and adaptive immunity (phagocytosis and Ag presentation)
Reside in tissues, lifespan – months/years e.g. Kupffer cells – liver, microglia – brain
Most often first line of non-self recognition
Main role – remove foreign (microbes) and self (dead/tumour cells)
Present Ag to T-cells
Role of Eosinophil in immunity
Mainly associated with parasitic infections and allergic reactions
Lifespan 8-12 days
Granules stain for acidic dyes (eosin)
Activates neutrophils, induces histamine release from mast cells and provokes bronchospasm
Role of basophil in immunity
Mainly involved in immunity to parasitic infections and allergic reactions
Lifespan 2 days
Granules stain for basic dyes
Very similar to mast cells
Binding of IgE to receptor causes de-granulation releasing histamine – main cause of allergic reactions
role of mast cells in immunity
Only in tissues (precursor in blood)
Very similar to basophils
Binding to IgE to receptor causes de-granulation releasing histamine – main cause of allergic reactions
role of T-lymphocytes in immunity
Play major role in adaptive immunity
Lifespan hours-years
Mature in thymus
Found in blood, lymph nodes and spleen
Recognise peptide Ag displayed presenting cells (APC)
What are the 4 types of T-cell and their roles
T helper 1 (CD4 – help immune response intracellular pathogens)
T helper 2 (CD4 – help produce antibodies extracellular pathogens)
Cytotoxic T cell (CD8 – can kill cells directly)
T regulator – regulate immune responses
Role of B lymphocytes in immunity
Play major role in adaptive immunity
Lifespan hours – years
Mature in bone marrow
Recognise Ag displayed by antigen presenting cells (APC)
Differentiate into plasma cells that make antibodies
Found in blood, lymph nodes and spleen
Role of Natural killer cells
Part of innate immune response
Account for 15% of lymphocytes
Found in spleen, tissues
They recognise and kill by apoptosis;
Virus infected cells
Tumours cells
What are the 4 soluble factors involved in immunity
Complement, antibodies, cytokines and chemokines
What are complement factors and how do they work
Classical – Ab bound to microbe
Alternative – C binds to microbe
Mode of action
Direct lysis
Attract more leukocytes to site of infection (chemotaxis)
Coat invading organisms (opsonisation)
What is an antibody
protein produced in response to an antigen. It can only bind with the antigen that induced its formation – i.e. specificity.
What are immunoglobulins (antibodies) and what are the 5 classes
Ig’s are soluble glycoproteins, with distinct classes : G, A, M, D, E
What is IgG
Predominant in human serum, 70-75% of total Ig in serum
Crosses placenta
What is IgA
Accounts for 15% of Ig in serum
Predominant Ig in mucous secretions such as saliva, milk and bronchiolar secretions.
What is IgM
Accounts for 10% of Ig in serum
Mainly found in blood (they’re big so they can’t cross the endothelium)
Mainly primary response, initial contact with Ag
What is IgD
Accounts for 1% of Ig in serum
A transmembrane monomeric form is present on mature B cells
What is IgE
Accounts for ~0.05% of Ig in serum
Basophils and mast cells express an IgE-specific receptor that has high affinity for IgE – binding triggers release of histamine
Associated with allergic response and defence against parasitic infections
Define Antigen
a molecule that reacts with preformed antibody and specific receptors on T and B cells.
Define Epitope
the part of the antigen that binds to the antibody/ receptor binding site
Define Affinity
measure of binding strength between an epitope and an antibody binding site. The higher the affinity the better.
define cytokines
proteins secreted by immune and non-immune cells. Substances produced by one cell that influence the behaviour of another, thus effecting intercellular communication.
What are the 4 types of Cytokines
Interferons (IFN)
Interleukins (IL)
Colony stimulating factors (CSF)
Tumour necrosis factors
What is the role of interferons
induce a state of antiviral resistance in uninfected cells and limit the spread of viral infection
What is the role of interleukins
produced by many cells, over 30 types.
Can cause cells to divide, to differentiate and to secrete factors
What is the role of colony stimulating factors
Involved in directing the division and differentiation on bone marrow stem cells – precursors of leukocytes
What is the role of tumour necrosis factors
Mediate inflammation and cytotoxic reactions
What are Chemokines
Group of approx. 40 proteins that direct movement of leukocytes from the blood stream into the tissues or lymph organs by binding to specific receptors on cells.
They attract leukocytes to sites of infection/inflammation – like magnets
What is the role of the Skin in innate immunity
is an anatomical barrier
Sebum (skin secretions)
Intact skin – prevents penetration, prevents growth
What is the role of mucous membranes in innate immunity
physical barrier
Saliva
Tears – lysozyme in tears and other secretions
Low pH and commensals of vagina
Mucous secretions
Mucous – entrapment
Cilia – beating removes microbes
Commensal colonies – attachment, nutrients
Define commensals
those type of microbes that reside on either surface of the body or at mucosa without harming human health.
Physiological barrier
High body temperature
Fever response inhibits micro-organism growth
pH changes
Gastric acidity
Define Extravasation
a discharge or escape, as of blood, from a vessel into the tissues. Usually lymph from blood into tissues
Define opsonisation
the coating of pathogens with antibodies in order to increase their susceptibility to ingestion by phagocytes.
What is C3b
Part of Complement component 3, is an important molecule in opsonisation
What is the major histocompatibility (MHC)
a group of genes that encode proteins on the cell surface that have an important role in immune response. they display self or non-self proteins.
What are the three MHC classes
MHC I- glycoproteins on all nucleated cells
MHC II- glycoproteins only on APC
MHC III- code for secreted proteins- not fully understood
What is an APC
Antigen presenting cell works in conjugation with MHC II to present antigens to T cells
Role of MHC I
Intrinsic (intracellular) – present intracellular proteins on surface to alert immune system, interacts with cytotoxic T (CD8) cells
Role of MHC II
Presents extracellular proteins to T helper (CD4) cells, initiates antigen specific immune response
What is T cell selections
T cells that recognise self are killed in the foetal thymus as they mature
Summarise B cell activation
B cells become activated upon binding with an antigen. These then go to the lymph nodes where clonal expansion takes place with the cells differentiating into plasma cells. These secrete Ab (usually IgM) which later turn into IgG. B cells divide – clonal expansion and differentiate into plasma cells and memory B cells. Re-stimulation of memory B cells lead to secondary response.
What do T helper (CD4) cells do
help coordinate the immune response by stimulating other immune cells, such as macrophages, B lymphocytes (B cells), and CD8 T lymphocytes (CD8 cells), to fight infection.
What do cytotoxic T (CD8) cells do
kill virus-infected cells and produce antiviral cytokines such as interferon gamma.
What are Pattern Recognition Receptors (PRRs)
proteins capable of recognizing molecules frequently found in pathogens. these are :
Pathogen-Associated Molecular Patterns-PAMPs
or Damage-Associated Molecular Patterns-DAMPs which are molecules released by damaged cells
What are the 2 types of PRRs
Secreted and circulating PRRs
Cell-associated PRRs (more traditional receptors)
What are Secreted and circulating PRRs
Antimicrobial peptides secreted in lining fluids from epithelia
Lectins and collectins (carbohydrate-containing proteins that bind carbohydrates or lipids in microbe walls. Activate complement, improve phagocytosis.