introduction Flashcards
Selective and Differential for Shigella spp. and Salmonella spp.
Xylose-Lysine-Deoxychocolate (XLD) Agar
Selective for Yersinia spp
• Indicators: Neutral red and crystal violet
Cefsulodin-irgasan novobiocin (CIN) agar
Isolation of C. diphtheriae
• Produces dark grey to black colonies
Cystine-tellurite blood agar
Isolation and growth of Corynebacterium
spp
Lowe Medium
For the selection and differentiation of
E. coli O157:H7 in stool specimens
McConkey Sorbitol Agar
Selective differentiation of staphylococci
• Inhibitor: 7.5% Salt
Mannitol Salt Agar
Enrichment and selective medium for
isolation of Bordetella pertussis and Bordetella parapertussis.
Regan Lowe
Enrichment and Isolation of Salmonella Spp.
Selenite Broth
Selective for Campylobacter spp.
Skirrow Agar
Selective for Campylobacter spp.
Skirrow Agar
Selective for Streptococcus pyogenes
and Streptococcus agalactiae
Streptococcal Selective agar
Selective and differential for Vibrio
cholerae and Vibrio parahaemolyticus
• Indicators: Bromothymol blue/ Thymol
blue
Thiosulfate Citrate Bile Salts agar
Selection and enrichment for
S. agalactiae in female genital specimens
Todd Newith Broth
Isolation medium for C. difficile
Cycloserine Cefoxitine Fructose Agar
single-cell prokaryotic microorganisms which multiply through Binary Fussion
Bacteria
single-cell prokaryotic microorganisms which multiply through Binary Fussion
Bacteria
Size of the Bacteria
0.5 - 1 in with
1 - 3 in length (but 0.4 - 2 in length in some books)
Ovoid Bacteria
Coccibacilli
Rod-Shape Bacteria
Bacilli
Spirochetes Bacteria
Spiral
The naming of microorganisms according to established rules and guidelines.
Nomenclature
Microorganisms are named based on:
o Scientist who discovered
o Disease they cause
o Where the organism was first isolated
The process by which a microorganism’s key features are delineated.
Identification
Microorganisms can be identified based on their:
Biochemical Activities
Protect against Mechanical Disruption of the Cell and offers barrier to the passage of larger substances
Cell Wall
Protect against Mechanical Disruption of the Cell and offers barrier to the passage of larger substances
Cell Wall
The thickness of Cell wall is the Basis of __________
Gram Stain
Technoic Acic & Lipoteichnoic Acid are:
Gram Positive
Technoic Acic & Lipoteichnoic Acid are:
Gram Positive
Lipoprotein & Lipopolysaccharide are:
Gram Negative
• Serves an anchorage for flagella
• Its synthesis and structure are often the primary target for the development and design of several antimicrobial agents.
Cell Wall
Bacterial with ni Cell Wall
- Mycoplasma
- Ureaplasma
Bacterial with ni Cell Wall
- Mycoplasma
- Ureaplasma
Complex structures, mostly composed of the protein FLAGELLIN, that are intricately embedded in the cell envelope
- It is also the responsible for the MOTILITY of Bacteria
Flagella
Absence of Flagella
Atrichous
Single flagella at one end
Monotrichous
single flagellum at both ends
Amphitrichous
Group of flagella at one End
lopotrichous
Group of flagella at one End
lopotrichous
Entire surface is covered with flagella
Peritrichous
entire surface is covered with flagella
Peritrichous
Hairlike, proteinaceous structures that extend from the cell membrane into the external environment; up to 2 μm long
Pili or Fimbriae
serve as adhesins that help bacteria
attach to the host cell
Common Pili
passage of DNA (conjugation)
Sex Pili
Example of Bacteria with PILI
- Neiserria
- Pseudomonas
Immediately exterior to the murein layer of gram-positive bacteria and the outer membrane of gram-negative bacteria
Capsule
Capsule is a Phagocytoc, Slimy are surrounding cell wall
TRUE OR FALSE?
False. It is Antiphagocytic & Slimy
Protects bacteria from attack by components of the human immune system
CAPSULE
The capsule also facilitates and maintains bacterial colonization of
biologic (e.g., teeth) and inanimate (e.g., prosthetic heart valves)
surfaces through the formation of ____________ or ___________
Slime Layers or Biofilm
The capsule also facilitates and maintains bacterial colonization of
biologic (e.g., teeth) and inanimate (e.g., prosthetic heart valves)
surfaces through the formation of ____________ or ___________
Slime Layers or Biofilm
Capsular Swelling Test:
Neufeld Queling Test
Bacterial structures that resist extreme environmental condition
Spores / Endospores
Spores has ________ which is the factor why it can resist heat
Calcium Dipicolinate
Bacteria that has CAPSULE which made of Polysaccharide
Kiebsiella Pneumonae
Haemophilus Influenzae
Neisseria Meningitis
Bacteria that has CAPSULE that is made with D-Glutamate
D. Anthracis
Target of Sterilization
Spores / Endospores
Spores are u adverse physical and chemical conditions or when nutrients are scarce, some bacterial genera (__________________) are able to form spores.
Bacillus (Aerobic)
Clostridium (Anaerobic)
• Also known as volutin granules or polyphosphate granules
• Intracellular storage inclusions found in certain bacteria and other microorganisms
Metachromic Granules
Much granules
M. tuberculosis
Babes Ernst Granules
C. Diptheriae
Sulfure Granules
- Actinomyces
- Nocardia
Bipolar Bodies
- Yersinia
- Pasteurella
- Brucella
Staining that used for Metachromic Granules which have safety pin appearance
Wayson’s Stain
• Circular double-stranded naked DNA
• Bacterial structure where the chromosome is located
Nucleoloid
• Antibiotic resistance structure
• Extrachromosomal double-stranded DNA
Plasmid
ACCORDING TO CARBON SOURCE:
they use CO2 as the sole source of carbon
Autotroph
ACCORDING TO CARBON SOURCE:
they used reduced, preformed organic
molecules from other bacteria
Heterotroph
AS TO ENERGY SOURCE:
uses light as energy source
Phototroph
AS TO ENERGY SOURCE:
uses the energy produced by the oxidation of
organic or inorganic compounds
CHEMOTROPH
ACCORDING TO ELECTRON SOURCE:
- from reduced inorganic molecules
LITHOTROPH
they require organix molecules (CHO, CHON, lipids) for growth and multiplication; all bacteria that inhabit the human body fall into this group.
ORGANOTROPH
most gram positive are:
chemoheterorganotrophs
most gram negative are:
photoautolitotrophs
require oxygen for growth
OBLIGATE AEROBE
Example of Obligate Aerobe
- Mycobacterium
- Pseudomonas
- Bacillus
cannot grow in the presence of oxygen
OBLIGATE ANAEROBE
Example of Obligate Anaerobe
- Actinomyces
- Bacteroides
- Clostridium
can live with presence or absence of
oxygen
FACULTATIVE ANAEROBE
example of Facultative Anaerobe
- Staphylococcus
- Streptococcus
- E. Coli
- Shigella
can grow in the presence of oxygen, but grow best in an anaerobic environment
AEROTOLERANT
Example of Aerotolerant
- Lactobacillus
- S. Pyogenes
grow in a reduced level of oxygen ( 2-10% O2)
MICROAEROPHILIC
Example of Microaerophilic
- Campylobacter
- Helicobacter
- T. pallidum
most bacteria grow well at pH 7.0 - 7.5
NEUTROPHILE
grows at an acidic pH
Ex. (Lactobacillus acidophilus)
Acidophile
grows at an alkaline pH
Ex. (Vibrio)
Alkalophile
grows well at 0—15ºC
Ex. Listeria monocytogenes
Yersinia enterocolitica
PSYCHROPHILIC (CRYOPHILIC)
grows 20—45ºC
Ex. Escherichia coli
Mesophilic
grows at 50—125ºC
Ex. Bacillus stearothermophilus
Thermus aquaticu
thermophilic
require concentrations of 5-10% CO2
for optimal growth
EX. Streptococcus pneumoniae
Haemophilus influenzae
Neisseria gonorrhea
CAPNOPHILIC
require increased concentration of NaCl (salt)
Enterococcus spp. - 6.5% NaCl
Staphylococcus aureus - 7.5% NaCl
Most of Vibrio spp.— 8% NaCl
HALOPHILIC
rejuvinance
initial phase
bacteria is adapting & adjusting
increase cell size
LAG PHASE
- rapid exponential growth
- increase growth rate
- increase bacterial cell number
- suceptible to antibiotics
- best phase to test anti suceptible testing
LOG PHASE
- no net growth
- the number of living and death cells are equal
- start to produce spores
- PLATEAU (Stationary Phase)
MEANING OF MALDITOF - MS in AUTOMATED INDENTIFICATION
Matrix assisted Laser Desorption/Ionization - Time of Flight Mass Spectrometry
movement of non-motile organisms caused by the movement of molecules surrounding them. This is not true motility
Brownian Motility
process of artificially coloring the organism with dyes/stains
Staining
SIMPLE STAINING
Methylene Blue
INDIRECT/ RELIEF/ NEGATIVE
Indin Ink, Nigrosin
Staining for Capsule
Hiss, Anthony’s
Staining for Endospores
Dorner’s, Schaeffer—Fulton, Wirtz—Conklin
Stain for Flagella
Gray’s, Fisher and Conn, Leifson
Stain for Metachromatic Granules
Albert’s, Neisser’s, Ljubinsky, Ponder,
LAMB (Loeffler’s Alkaline Methylene Blue)
Stain for Spirochetes
Levaditi, Silver impregnation, Warthin—Starry, Fontana Tribondeau
Stain for DNA
Acridine orange, Feulgen
Stain for DNA
Acridine orange, Feulgen
Stain for Bipolar bodies
Wyson
Stain for Ricketssia
Macchiavelo, Gimenez
Stain for B. Anthracis
Mcfayden
Stain for H. pylori
Toluidine blue
Stain for H. pylori
Toluidine blue
Stain for Mycoplasma
Dienes
Stain for Legionella
Dieter Silver Stain
Stain for Corynebacterium
bismark brown
Counterstain for Gram Stain
Safranin
Primary Stain for Ziehl-Neelsen Method
Carbol fuchsin
Mordant for Kinyoun Method
Tergitol
All spiral organism are ____________
Gram Negative
All yeasts are ____________
Gram Positive
Not gram stained:
Ricketssiae, Chlamydia, Mycoplasma, Ureaplasma
Staining Method used for Mycobacterium
Acid Fast Stain
To differentiate M. smegmatis/ M. lacticola (blue) from M. tuberculosis (red)
PAPPENHEIM’S
To differentiate M. leprae (blue) from M. tuberculosis (red)
BAUMGARTEN’S
For M. leprae: uses hematoxylin
as counterstain
Fite Faraco
Uses Auramine - Rhodamine Dye
• No mordant
• Uses 0.5% acid alcohol as Decolirization
• 0.5% Potassium permanganate (KMnO4) as Counterstain
• Result: Yellow against Black Background
FLUOROCHROME STAIN
medium that contains all nutritional requirements to support bacterial
growth
Culture Media
organisms which have grown on media
Culture
contain specific nutrients required for the growth of
particular bacterial pathogens;
—to support growth of fastidious organisms
Enrichment Media
contain nutrients that support growth of most non- fastidious organisms without giving any particular organism a growth
advantage
Nutritive Media
promotes the growth of the desired organism while inhibiting the growth of others; contains inhibitors (i.e., antibiotics, dyes, bile salts)
Selective Media
used to differentiate organisms growing together
Differential Media
used to maintain viability of organisms during specimen transport
Transport Media
What is Mueller-Hinton Agar
Media for Antibiotic Susceptibility Testing
Most bacteriology specimens are inoculated to ____________ plates, because this medium supports growth for all but the most fastidious clinically significant bacteria.
Blood Agar
Enriched agar that is essentially the same as BA except that during preparation the red blood cells are LYSED when added to molten agar base
Chocolate Agar
Nutritionally rich formula containing three peptone sources and 5% defibrinated sheep blood.
COLUMBIA COLISTIN-NALIDIXIC ACID
disrupts the cell membranes of GN organisms
CYSTINE
blocks DNA replication in susceptible
organisms
Nalidixic Acid
Used as a primary selective and differential agar.
Eosin Methylene Blue
contains bile salts and dyes (bromothymol and acid fuchsin) to selectively slow the growth of most nonpathogenic GN bacilli found in the gastrointestinal tract while allowing Salmonella spp. and Shigella spp. to grow.
Hektoen Enteric Agar
Indicator of Hektoen Enteric Agar
Ferric Ammonium Citrate
Frequently used as the primary selective and differential agar for the isolation and differentiation of GN bacilli.
MacConkey Agar
An enrichment and selective medium for the isolation of Neisseria
Modified Thayer Martin Agar
The enrichment portion of the MTMA includes peptone starch, amino acids, glucose, nucleotides, and the chocolatized blood, and the addition of ____________ provides a selective capacity.
Antibiotics
The glucose and agar concentrations are LOWER than the original
Thayer-Martin agar, which improves growth of the _____________ organisms.
Fastidious Organisms
Semi-solid media most frequently used in diagnostic bacteriology
THIOGLYCOLLATE BROTH
acts as a reducing agent to create an
anaerobic environment deeper in the tube, allowing anaerobic
bacteria to grow.
Thioglycolic Acid
acts as a reducing agent to create an
anaerobic environment deeper in the tube, allowing anaerobic
bacteria to grow.
Thioglycolic Acid
Thioglycollate Broth Contains _______________ to prevent convection currents from
carrying atmospheric oxygen throughout the broth.
0.075% Agar
As with HEA, _______________agar is selective and
differential for Shigella spp. and Salmonella spp.
• The salt, sodium deoxycholate, inhibits many GN bacilli that are not
enteric pathogens and inhibits gram
Xylose - Lysine - Deoxychocolate Agar
Inhibitor of XLD
Sodium Deoxychocolate
Inhibitor of XLD
Sodium Deoxychocolate