In vivo an in vitro Antibody use Flashcards

1
Q

What is the FcRn?

A

neonatal Fc receptor, binding on the Fc region of the maternal Ab

Function: Transfer Ab into the fetus, and also cross the epithelial cells of the intestine to the blood (breastfeeding)

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2
Q

What is passive immunity?

A

Immunization by delivering preformed antibodies
from one person to the other

-no long-lived B-cells
-no memory cells -> inhibit memory cell formation
-Short term: IgG last for 2 weeks
-used for immune deficiency (children), Toxins or venoms (life-threatening), or pathogens that kill fast

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3
Q

Why is is the Rh factor dangerous?

A

1st pregnancy: Blood transfer during delivery or pregnancy -> exposure to fetus Rh antigen on RBC -> formation of maternal Ab and memory cells against Rh

2nd pregnancy: maternal Ab circulates into fetus bloodstream -> causes destruction of fetal RBC by Ab binding and complement

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4
Q

How can Hemolytic disease of Newborns due to the Rh factor be treated?

A

-intrauterine blood exchange transfusion
-UV light decreases toxic RBC fragments
-use anti-Rh Ab to prevent exposure to Rh-specific B-cells -> no Ab formation, no memory cells

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5
Q

Why are sometimes antibody fragments created in the lab, instead of the complete Ab?

A

Because the Fc region of the Ab binds to the Fc receptor of immune cells (macrophages, NK cells, neutrophils) and causes inflammation

-> sometimes we just want the Ab to bind a specific enzyme in its active site -> so the Ab is fragmented and only the Fab or F/ab)2 region is used

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6
Q

Difference between Fab and F(ab)2:

A

Fab consists of 2 different chains a and b (one heavy, one light)

Fab has 1x heavy and light chain binding site
F(ab)2 has 2x heavy and light chain binding sites -> Agglutination, collecting antigens with a “net”

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7
Q

How can Fab proteins be made more stable?

A

Genetically engineered (scFv) single chain Fv fragments: connecting the heavy and light chain together with binding regions within the same protein

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8
Q

How can engineered Ab fragments be used in diseases?

A

Chimeric Antigen receptors
create Ab fragments against tumor-specific antigens (f.e. CD19 on B-cell leukemia) on cancer cells to make it a target for T-cells -> activation of a killing cascade

-not really a T-cell receptor, no CD28 - CD80 involved, to alert T-cells to cancer cells

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9
Q

How are antibodies created in the lab?

A

With antigens given to mice (polyclonal or monoclonal)
adjuvant (f.e. PAMPs) together with Ag needed bc just the protein sometimes doesn’t cause a strong immune response (with cytokines, memory cells)

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10
Q

What are polyclonal Antibodies?

Pro and Cons

A

When exposing a mouse to an antigen, different B-cells bind to different epitopes of that same antigen -> formation of different Ab -> after a few weeks all the Ab are isolated and purified -> now you have polyclonal Ab

Pro: different Ab will be able to Agglutinate
Cons:
-not specific to inhibit an enzyme (Toxins) on the specific active site
-cross-reactivity

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11
Q

How are monoclonal Antibodies made?

A

Expose the mouse with antigens and adjuvant -> stimulate an immune response -> instead of isolating the Antibodies, get the B-cells i.e. from the spleen -> hybridize with myeloma cells to produce a high number of antibodies -> dilute in single wells to a single B-cell that produce one specific antibody -> test the single antibodies and find out which one actually inhibits your target

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12
Q

How can mouse-created antibodies be used in humans?

A

-Humanize the antibodies: replace the mouse Fc region with the human Fc region and keep the mouse Fab region or just the binding site in the Fab region

-Immunotoxin: replace the Fc region with a toxin molecule (how does that Ab bind to the target without Fc region??)

for detection: Conjugation
-with Biotin/enzymes (ELISA), Fluorescent dyes (immunofluorescence or flow cytometry), synthetic beads (immunoprecipitation)

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13
Q

How are modified Ab used in blocking anti-inflammation?

A

-Blocking of CTLA-4 (inhibits T-cell activation after a few days -> we want to keep the T-cell active in case of cancer)

-APC express inhibitory receptors -> cancer cells mimic that -> blocking of inhibitory receptors

-if you want to kill: conjugate the antibody with a toxin, the toxin will attack the cancer cell
or use the Fc region to bind NK-cells that bind to modified Ab which binds to the target cell -> NK cell kills the target

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14
Q

Modified Ab to target human cancer cells activate which type of innate immune cells?

A

NK-cells

6 ways how Ab kills:
-Neutralization (block)
-Agglutination
-Opsonization (Macrophages)
-Complement activation

for human cells (they are large)
-Antigen-dependent-cytotoxicity (cytotoxic with NK-cells)
-ADDG (Degranulation: Basophils, Mast cells, Neutrophiles -> worms)

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15
Q

Use of monoclonal Antibodies against tumor cells:

A

mAb against CD20 B-cell marker
OR
create anti-idiotype mAb binding to the Fab region of B-lymphoma Ab
1. take B-lymphoma and fuse it with Myeloma and select for secreted Antibodies from that B-lymphoma
2. Put the Ab into a mouse, which will form antibodies against that B-lymphoma-Ab in the spleen -> fuse with mouse Myeloma and get the specific Ab that inactivates the B-lymphoma
3. inject into a patient

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16
Q

How can the Ab be screened?

A

-Biotin/enzymes: stick Biton and the enzyme creating dye on the antibody that binds to the target

-Fluorescent dyes on anti-CD20 antibodies to see identify B-cells

-take a sample from the spleen and add magnetic beads which will bind the antibodies of interest

17
Q

What is immuno-precipitation?

A

-Removing from solution with antibodies
direct IP: can pull down the protein of interest (wash anything else away, and cleave away the Ab with salt to get the pure protein)

Co-IP co-immunoprecipitation: we know one protein, where we can create an Ab, we want to know what it binds to

Chromatin IP (ChIP): identify DNA binding sequences

18
Q

What is Hemagglutination?

A

QUANTITATIVE (not exact)
-Detection of antigens (A, B) on the surface of RBCs
-Detection of bacterial antibodies (Abs against a virus are too small)
-Detection of Influenza: Influenza has proteins that bind to RBCs = Hemaglutinin; when testing, the antibodies will prevent Agglutination bc it binds the Hemaglutinin, which will prevent Hemaglutinin from agglutinating RBCs -> so the opposite outcome for a positive test

19
Q

What is an Enzyme-Linked Immunoassay?

A

QUANTITATIVE (more precise)

-antigens are in the well -> antibody binds to it -> an enzyme is linked to the antibody -> add a substrate that will create a color, which can be measured -> colorimetric product

Enzyme: f.e. Biotin/Streptavidin
also possible with primary Ab and secondary Ab (binding to Fc region of primary) with the enzyme

20
Q

Indirect and Sandwich ELISA:

A

Indirect: to see if you have a specific Ab
bottom-known: Antigen
middle-unknown: Antibody (binds antigen when present)
top-known: in mouse-created antihuman Ab + enzyme-linked (expensive)

SANDWICH: to see if we have a specific antigen

bottom: Antibodies - known
middle: Antigens - unknown (often cytokines)
top: Antibody against the antigen + enzyme-linked to it

21
Q

Rapid Test Assays:

A

-Sandwich-ELISA working faster
COVID-Test, Pregnancy-Test, HIV-Test

-sample with Ag will bind on labeled Ab in the port
-> Ag bound to labeled Ab will bind to stationary Antibodies, if no antigens are present the labeled Ab will bind to control station and bind to antihuman-IgG there

22
Q

Western-Blotting:

A

-Identifying and roughly quantifying proteins -> separation by charge (charge them negatively) and size on Acrylamidgel

smallest at the bottom, biggest on the top

-cell exposes a lot of proteins -> so to find the specific protein of interest you link an antibody with an enzyme to the gel, to see how much of the protein is present -> it creates a band
-> INDIRECT ELISA APPROACH

23
Q

Explain Microscopy Analysis:

A

-Immunocytochemistry (isolated cells) and immunohistochemistry (tissues) use enzyme-conjugated antibodies to create images of fixed cells/tissues (different colors for different cells)

-Electron microscopy: antibodies conjugated to electron-dense gold beads (electrons don’t pass through beads) -> f.e. identify CD28 - CD80 interaction with different sized beads

24
Q

Immunofluorescence-Based Imaging

A

hit a molecule (bound to a dye) with a wavelength of light -> it will absorb the light and emit at a higher wavelength (lower energy) -> the emission is detectable with special microscopes and the filters

25
Q

Flow Cytometry:

A

-different cells with different colored tags (Ab-tags) in a fluid will run through a thin tube
-detection of different colors that represent different cells (even non-tagged cells are detectable)
-they can be sorted and you can see how much you have of a specific blood type

26
Q

Cell Cycle Analysis

A

-Bromodeoxyuridine (BrdU)-based assays (looks like Thymidine -> Br replaces Methyl -> to create an Ab against Br)

-phosphorylated BrdU is integrated into new synthesized DNA instead of Deoxythymidine -> create Ab with haptens against BrdU

-BrdU can be used in TUNEL-Assay -> to find out how much apoptosis a cell has been going through (the more apoptosis the more cut DNA),

Tdt (used to add BrdU to chopped ends) and BrdU are added to the chopped DNA pieces + Fluroescenated Ab -> compare to healthy cell DNA, it will have more BrdU -> they bind to loose ends,

27
Q

IN-CLASS QUIZ:

A

MATCHING:

IgG: Complement, Macrophages, NK, TH1
, IFN-gamma
IgE: Mast cells, TH2
IgA: Mucosal (IgA in MALT), Dimeric (mucosal), Macrophages, Monomeric (blood), NK,
IgM: Pentameric, Complement, Weakest binding (bc not hypermutation, but IgM has a higher number)