Immunology Flashcards
What is the function of the immune system?
To protect the host from pathogenic microbes by distinguishing self from non-self, and recognising danger signals.
What general balance does the immune system need to negotiate?
A balance between clearing the pathogen and collateral damage to the host (immunopathology)
How does the immune system keep up with the evolutionary arms race?
It is flexible and has a rapid immune response. Our most polymorphic genes control the immune system (HLA and KIR).
What is the primary response against a virus? What purpose does this serve?
Spike of type-1 interferon, followed by a peak of NK cells. It works to bring down virus titre.
What are the two TYPES of immune response?
Innate and Acquired
What are the anatomical and physiological barriers of the innate immune system?
Anatomical: Skin, Mucus, Cilia
Physiological: pH, lysozyme, interferons, antimicrobial peptides, complement
What are the components of the innate immune system?
Cellular: Neutrophils, NK Cells, Macrophages (and monocytes), Dendritic cells, Mast cells and the Granulocytes
Humoral: Anti-microbial peptides, complement and cytokines
What are the components of the adaptive/acquired immune system?
Cellular: Macrophages (and monocytes), Dendritic cells, Mast cells and Lymphocytes
Humoral: Complement, Cytokines and Antibodies
How is the innate response triggered?
PAMPs (pattern-associated molecular patterns) and DAMPs (danger-associated molecular patterns)
What are the pattern-recognition receptors?
Extracellular: Toll-like receptors
Intracellular: Nod-like receptors, AIM2, RGI-I like receptors
What are the functions of the innate immune system?
- destroy invading nucleic acids
- activates interleukins to activate inflammatory pathways
- elicits type-1 interferons
What does the acute phase inflammatory response involve?
- Production of acute phase proteins by the liver. These include C-reactive protein and serum amyloid protein to bind to molecules on cell walls, and mannan-binding lectin, binding to mannase sugar. These molecules direct phagocytes to identify and ingest the infectious agent.
- fever response caused by interleukin-1
- increased production of white blood cells
What are cytokines?
Large family of small proteins that carry messages from one cell to another.
What are the Granulocytes and their functions?
Basophils: release histamines, serotonin and prostaglandins
Neutrophils: phagocytic
Eosinophils: work against parasites
What is an antigen?
A molecule that reacts with antibodies or a T-cell
What is an immunogen?
An antigen that can initiate and immune response
What is an antibody?
An immunoglobulin molecule in blood and bodily fluids which binds specifically to an antigen.
What are the different classes of immunoglobulins and their relative percentages in serum?
IgG (75%) IgM (10%) IgA (?) IgE (?) IgD (?)
How dies an antibody recognise an antigen?
The antibody’s binding site makes a perfect fit with an epitope on the antigen.
How can an antibody help eliminate a virus?
- Neutralisation (binds to virus, preventing attachment to cell)
- Opsonisation (virus-antibody complex is phagocytosed)
- Complement mediated lysis of enveloped virus
- Antibody-dependent cell-mediated cytotoxicity (ADCC)
What are the granular and agranular leukocytes?
Granular: NK, monocytes and granulocytes
Agranular: lymphocytes
What is the difference between active and passive immunity?
Active immunity is acquired immunity after infection. Passive immunity is acquired without needing to activate the immune system.
What antigens do BCR and TCR recognise?
BCR recognises intact antigens
TCR recognises processed antigens presented on MHC molecules.
Where (genetically) do lymphocyte genetic recombinations occur?
On immunoglobulin gene segments (for B-cell) and TCR gene segments (for T-cell)
Where do T-lymphocytes meet antigens?
Antigen-presneting cells transport antigens to the secondary lymphoid tissues.
What are the professional antigen-presenting cells?
- Dendritic cells
- Macrophages
- B lymphocytes
What are lymphoid organs?
Organised tissue in which lymphocytes interact with non-lymphoid cells.
What are the primary lymphoid organs?
Where lymphocytes are produced: Thymus and Bone marrow
What are the secondary lymphoid organs?
Where lymphocytes can interact with antigens: Lymph nodes, Spleen and MALT
What are the lymphatic vessels?
Venules, Veins and Ducts
What are the lymphatic tissues?
Nodules, Nodes and Tonsils and Peyer’s patches
How does the thymus change during infections and through ageing?
No obvious change during infections. Thymus output declines with age, but total number of lymphocytes do not.
How does bone marrow change during infections and through ageing?
Increased white cell production during infections. As we age, the bone marrow becomes less cellular but more fatty.
What are the different compartments in lymph nodes?
Lymphoid follicles are cortical to the T-cell areas. Germinal centers can exist on the lymphoid follicles during B-cell proliferation.
How is the organisation and segregation of lymphocytes in secondary lymphoid tissue achieved?
Through chemokine gradients.
What is the immunological role of the spleen?
Filters the blood for antigens.
What are the different compartments of the spleen?
Red pulp.
White pulp, made of periarterial lymphatic sheath (T-cell area), primary folicle (B-cell area) and germinal centers.
What are people without a spleen particularly susceptible to?
Infections with encapsulated bacteria.
How is the epithelium immunologically guarded?
Cutaneous immune system and Mucousal Associated Lymphoid Tissue (MALT).
What are the lymphoid tissues in the gut called?
Peyer’s patches.
What makes up MALT?
Peyer’s patches and M cells (dendritic cells of the gut).
How are antigens surveyed in the gut?
M cells sample the contents of the guts for antigens and uptake any antigens, traveling to lymphocytes in Peyer’s patches.
What makes up the cutaneous immune system?
Keratinocytes (physical barrier), Intraepidermal lymphocytes and Epidermal langerhan cells (similar function to M cells)
How does the body ensure the antigen meets with the specific lymphocyte?
- Anatomical structure of the immune system
- Lymphocyte re-circulation
When do naive lymphocytes stop circulating?
When they are activated or die.
What is the name of the process by which cells extravasate?
Diapedesis
How do leukocytes extravasate into tissue?
1) Rolling: lymphocytes roll across the endothelial wall. Selecting binds the cell to the endothelium. The selections can be expressed on the endothelium or the cell.
2) Activation: cytokines attract the cell closer to the endothelium, allowing integrins to be activated.
3) Adhesion: Integrins change from a low-affinity state to a high-affinity conformation, allowing the cell to migrate into the tissue.
What does CD stand for?
Cluster of Differentiation
What are the features of lymphocytes under a microscope?
Large nucleus and granular cytoplasm
What receptors are found on T-cells?
All T-cells have CD3. There are two type of TCR: 90% are (alpha)(beta), 10% are (gamma)(delta).
2/3 of (alpha)(beta) are CD4, 1/3 are CD8
What receptors are found on B-cells? (excluding BCR)
CD19 and CD20
Can also express MHC Class II
What do follicular dendritic cells do?
Capture antigens to develop B-cells in germinal enters in lymph nodes.
How can the innate immune system recognise pathogens?
1) Detecting PAMPs
2) Detecting DAMPs
3) Detecting missing self (NK cells) using MHC Class I
Give examples of bacterial, viral, fungal and parasitic PAMPs
Bacterial: Flagellin, LPS, Peptidoglycans, Lipoteichoic Acid, Formyl peptides, DNA, Glycolypids
Viral: Envelope glycoprotein, ssRNA, dsRNA, Unmethylated CpG motifs.
Fungal: Mannoproteins, beta-glucans, Unmethylated CpG motifs, popspholipomannan
Parasite: Profilin, Glycolipids, DNA
Give examples of DAMPs from necrosis and injury
Necrosis: High ATP and DNA outside cells, Interleukin-1alpha, Interleukin 18, HSPs, S100 proteins
Injury: fragments from ECM such as Heparin sulphate, Hyaluronan, Aggrecan, Fibronectin, Collagens and Fibromodulin.
What are the properties of neutrophils?
They are polymorphonuclear leukocytes.
Short-lived
Migrate into tissue
First cells to be recruited to a site of tissue damage/infection
Have a multi-libed nucleus
Have primary azurophilic granules and secondary granules
How do neutrophils fight infection?
1) Move into tissue
2) Bind to pathogens. More effective after opsonisation as they have receptor proteins for opsonins.
3) Kill pathogen after phagocytosis.
4) Form NETs (neutrophil extracellular traps) by releasing granule proteins and chromatin to form extracellular fibres.
What are the two main types of opsonins?
Antibodies and complement
How do neutrophils kill phagocytosed bacteria?
Oxygen-independent:
- enzymes
- lysozyme
- defensins (antimicrobial peptides)
Oxygen-dependent:
- respiratory burst (toxic metabolites such as superoxide anion, hydrogen peroxide, hydroxyl radical, singlet oxygen)
- reactive nitrogen intermediates (nitric oxide)
How are monocytes and macrophages different?
Macrophages are larger, contain lysozyme and phagolysosomes.
What are the types of cytokines?
Interleukins
Inteferons
Chemokines
Growth factors (development of immune system)
Cytotoxic (such as Tumour Necrosis Factor)
What are the important interleukins?
IL-1: alarm cytokine causing fever
IL-6: acute phase protein
IL-8: chemotactic function for neutrophils
IL-12: directs adaptive immunity and activated NK cells
How can cytokines cause septic shock?
Macrophages release massive amounts of TNF-alpha and IL-1. This causes increased vascular permeability and a severe drop in blood pressure.
What is the complement system?
A system of glycoproteins and proteins forming a triggered enzyme cascade system.
Where are complements mainly produced?
In the liver, and also by monocytes and macrophages.
What are the ways the complement system can be activated?
- Classical pathway (antigen-antibody complexes)
- Alternate pathway (direct activation by pathogen surface)
- Lectin pathway (antibody-dependent activation of classical pathway by lectins binding to carbohydrates on pathogens)
What is the Y of complement?
How the classical and alternate pathways converge at C3, which leads to the formation of Membrane Attack Complex (MAC).
How is the complement system regulated?
- half-life of components
- complement is diluted
- membrane bound and circulating regulatory proteins such as CD59 (which prevents complement related lysis of own cells)
What are the functions of the complement system?
- Lysis
- Opsonisation
- Activation of inflammatory response (by fragments)
- Clearance of immune complexes