Immunology Flashcards
The Immune system
The immune system is an organised system of organs, cells and molecules which interact together to defend the body against disease.
Microbes
- Viruses
- Bacteria
- Fungi
- Protozoa
(in order of increasing size nm - mm)
We encounter many of these on a daily basis, many are good, most do no harm leaving only a very small number of pathogens (disease causing microbe).
Organs of the immune system
Primary lymphoid organs - Production of white blood cells.
Bone marrow - Source of stem cells which develop into the innate and adaptive immune responses.
Thymus - ‘School’ for T cells. Where developing T cells learn not to react to self (autoimmunity).
Secondary lymphoid organs - Sites where the immune responses are initiated.
Lymph nodes - Located along the lymphatic vessels. Lymph fluid from blood and tissue is filtered. Site of initiation of immune responses.
Spleen - Site of initiation for immune responses against blood-borne pathogens.
Tonsils
3 Layers of defense
- Chemical and physical barriers - stop pathogenic or disease causing organisms from getting into our body.
- Innate ‘arm’ - React very quickly to try and destroy invading microbe.
- Adaptive ‘arm’ - Largely orchestrated by T cells and B cells. Can make antibodies and form memory cells.
Physical barrier - Skin
Epidermis - Outer layer. Dead cells, keratin and phagocytic immune cells. Largely made up of layers of dead cells.
Dermis - Inner layer. Thick layer of connective tissue, collagen and blood vessels and phagocytic immune cells.
Skin is constantly shedding meaning there is constant renewal. This helps to get rid of and fight microbes which get o our skin.
Phagocytic immune cells
Engulf microbes to destroy them.
Dendritic cells are an important phagocytic cell which links the innate and adaptive ‘arms’ together.
Many myeloid cells are phagocytic - neutrophils, macrophages, dendritic cells.
Chemical defences of the skin
- Antimicrobial peptides - eg skin defensins
Form pores in microbial cell membranes causing it to leach out its nutrients and die. - Lysozyme - breaks down bacterial cell walls
- Sebum - Low pH, antimicrobial as microbes don’t like acidic environments produced by sebaceous glands at the base of hair on our skin.
- Salt - hypertonic environment can desiccate (dry out) microbes. Produced in sweat in the sweat glands.
Mucous Membranes
Line parts of our body that are inside our body but come in contact with air and lead to the outside. eg urinary tract, respiratory tract, eyes, nasal passage, gastrointestinal tract etc.
Epithelium layer is composed of tightly packed live cells, constantly renewing. Also contains mucus-producing goblet cells which produce a mucus layer across the top surface of the mucous membrane for protection.
Mucociliary escalator
Functions to get things which we’ve inhaled but shouldn’t have out of our lungs and back up (so we can swallow it or cough it out).
Cilia located on the surface of some cells which line the respiratory tract. Cilia will move the mucus which contains particles like dust, bacteria etc up.
Other chemical defenses on mucosal surfaces
Tears - Flush away microbes in our eyes
Stomach - Low pH - too acidic for microbes
Gall bladder - Bile which is antimicrobial
Intestine - Digestive enzymes which break down most bacteria.
Mucus
Defensins
Lysozyme (in tears and urine)
Skin vs Mucous membrane
- Number of cells layers - Skin = many, Mucous = 1 - a few
- Tightly packed cells? - Both = Yes
- Cells dead or alive? - Skin = outer layer is dead, inner layer is alive, Mucous = Alive
- Mucus present? - Skin = No, Mucous = Yes
- Lysozyme and defensins? - Skin = Yes, Mucous = some cases
- Sebum? - Skin = Yes, Mucous = No
- Cilia present ? - Skin = no, Mucous = In trachea and uterine tracts
Note - Constant flow of fluids through the gut is another mechanism which is antimicrobial.
Innate
Rapid response (almost immediate = mins to hours)
Already in place (waiting and ready to act when microbe invades)
Fixed (same response for every microbe)
Limited specificities (not able to recognise many differences between different microbes)
Has no specific memory
Innate responses include:
Surface barriers = skin, mucous membranes
Internal Defences = phagocytes, natural killer cells, inflammation, antimicrobial proteins, fever.
Adaptive
Slow (days to weeks)
Improves during the response
Variable
Highly specific (can tell 1 strain of a virus from another strain)
Has long term specific memory
Essential for fighting against intracellular pathogens such as viruses.
Adaptive response includes:
Humoral (antibody) immunity = B cells
Cellular immunity = T cells
Blood
Composed of plasma and cells.
Plasma (55%) = proteins, other solutes and water
Formed elements (45%) = Platelets, white and red blood cells
Bone marrow
Bone marrow stem cells = source of blood cells (stem cells differentiate into all different kinds of cells).
This process is called hematopiesis.
3 blood cell lineages:
- Erythroid = red blood cells
- Myeloid = granulocytes, monocytes, dendritic cells, platelets (innate immune cells)
- Lymphoid = B and T lymphocytes (adaptive immune cells)
Note - white blood cells (leukocytes) = myeloid + lymphoid.
Granulocytes
In blood:
Granulocytes circulate in the blood and can move into tissue during inflammation.
Neutrophils - 75 % of all leukocytes. Highly phagocytic “eat and kill”, numbers in blood will increase during infection.
In tissue:
Mast cells - Line mucosal surfaces. Release granules - (performed chemicals stored in the cytoplasm) ie degranulate to send chemical signal to other cells and attract white blood cells to areas of tissue damage (inflammation / infection).
Phagocytic cells
Monocytes = present in blood (prominent nucleus). Low phagocytosis, when they leave the blood they develop into macrophages in the tissues, such as spleen and liver.
Macrophages = quite large. High phagocytosis. Can either be migratory (move from blood to tissue and then leave again) or they will stay in the tissue and become resident (sessile).
3 functions:
1. Phagocytosis
2. Communicate with other cells through the release of chemical messengers (messenger released by an immune cell and bind to another immune cell on the surface to warn the cell theres danger or tell that cell to change so its ready for the infective agent).
3. Show information about pathogenic microbes to T cells.
Dendritic cells
Linking innate and adaptive immune responses.
Found in low numbers in blood and in all cell tissues in contact with the environment, as their potent (don’t need many to do what they do).
Phagocytic
Most important cell in triggering the adaptive immune responses.
Movement of cells in the immune system
Cells are carried in the blood and lymph, they can leave the blood to enter tissues. Lymph in tissues collects into lymphatic vessels which drain lymph into lymph nodes.
For example, if we had an infection in our big toe, dendritic cells in the big toes would move into lymphatic vessels and drain into a local lymph node where they an interact with other immune cells like T cells
How do our innate cells recognise pathogens
Different types of microbes have the same building blocks. There are common molecular patterns that recur with certain pathogens. These are known as PAMPS - pathogen-associated molecular patterns, these are not very specific.
Common building blocks of viruses
- Nucleic acid = single or double stranded RNA.
When viruses go into cells they will remove their nucleocapsid and envelope leaving naked nucleic acid.
Thus our immune system can recognise nucleic acid.
Common building blocks of bacteria
- Cell Wall = lipopolysaccharide (LPS), endotoxins, lipoteichoic acid
- Flagella = flagellin (protein)
- Nucleic acid = unmethylated CpG DNA. Bacteria DNA has lots of C and G bases together and are unmethylated compared to our DNA which is methylated.
Thus our immune system can recognise unmethylated CpG in the DNA
Pattern Recognition Receptors (PMR)
PMR are expressed on the surface or on the inside of the cell and are able to recognise PAMPS.
If a PAMP binds with a receptor, a signal will be sent down to the nucleus telling it to up-regulate gene transcription and start making proteins needed to fight the infection.
Receptors on the surface of the cell can recognise bacterial cell wall components whilst receptors internally in phagolysosomes which bacterial and viral nucleic acids can bind to, sending the same signal to the nucleus.
Fever / Pyrexia
Will encounter a fever if you have an infection.
Signs of fevers = abnormally high temperature > 37 degrees.
Arises when signals to the hypothalamus to set the thermostat, tell it to reset and that the body needs to be hotter, this causes the body to feel cold.
This is caused by pyrogens - cells released by the immune system.
Pyrogens include chemical messengers such as the cytokine interleukin 1 (IL-1) which are produced by cells that are highly phagocytic.
When the phagocytes stop engulfing things, IL-1 decreases, causing the temperature to decrease back down to its normal level.
Why does our body need to be hotter?
Hotter temperatures can inhibit some microbes from growing.
Can also cause our immune system to improve its function
Thus a slight temperature can be beneficial in fighting infections but a temperature too high can be dangerous.
The inflammatory response
A nail goes into our foot:
- Mast cells will release chemical signals sending out messages from resident cells to attract more cells to the site of injury / infection.
- Neutrophils generated in the bone marrow will enter the blood (leukocytosis). If they receive signals from these chemoattractant chemicals being released by mast cells they will begin to move from the blood to the tissue. This happens because :
- Neutrophils will slow down and cling to the capillary wall (Margination).
- The signals also tell the blood vessels to dilate, making them bigger resulting in more cells in that are and slower movement of the cells.
- Signals also tell the blood vessels to become ‘leakier’ which enables the neutrophils to squeeze out through the vessels walls (diapedesis).
- They will then follow the chemical trail to the site of injury (chemotaxis)
Phagocytosis Stage 1
inflammatory response continued
Phagocyte adheres to pathogen or debris:
Happens through receptors on the phagocytes membrane which are able to recognise bacteria thats been opsonized (like a sticky note on its head saying ‘eat me’).
Things which can opsonise bacteria:
- complement
- antibody
Phagocyte receptors can bind to these and if they have labelled bacteria, then they’re effectively binding to the bacteria.
Phagocytosis Stage 2
Phagocytic cell is triggered to form a pseudopod, that eventually engulfs the particles forming a vesicle called a phagosome.
Phagocytosis Stage 3
The phagocytic vesicle can fuse together with a lysosome forming a phagolysosome.
Phagocytosis Stage 4
Lysosomes are filled with toxic compounds and enzymes as well as a very acidic environment that will degrade and destroy the pathogens.