Immuno Flashcards
What do sebaceous glands produce that has antibacterial effects?
Hydrophobic oils – repels water and microorganisms
Lysozyme – destroys the structural integrity of the bacterial cell wall
Ammonia and defensins – anti-bacterial properties
List the cells of the innate immune system.
Polymorphonuclear cells
Monocytes/macrophages
NK cells
Dendritic cells
List the soluble components of the innate immune system.
Complement
Acute phase proteins
Cytokines and chemokines
List some key features of cells of the innate immune system.
Identical responses in all individuals
Cells express genetically-encoded receptors (PRRs) that allow them to detect pathogens at the site of infection
Cells have phagocytic capacity
Cells secrete mediators (e.g. cytokines/chemokines) that regulate the immune response
Name the resident macrophage in the liver
Kupffer cells
Name the resident macrophage in the kidney
Mesangial cells
Name the resident macrophage in the bone
Osteoclasts
Name the resident macrophage in the spleen
Sinusoidal lining cells
Name the resident macrophage in the neural tissue
Microglia
Name the resident macrophage in the connective tissue
Histiocytes
Name the resident macrophage in the skin
Langerhans cells
How do macrophages differ from polymorphonuclear cells?
They can process antigens and present them to T cells
Describe how cells of the innate immune system recognise pathogens.
Pattern-recognition receptors (e.g. TLR) recognise generic motifs called PAMPs (e.g. bacterial sugars, DNA and RNA)
Fc receptors on these cells allows binding to the Fc portion of immunoglobulins thereby allowing phagocytosis of immune complexes
Which other factors can bind to phagocytes to facilitate phagocytosis?
Complement components (e.g. by binding to CR1)
Acute phase proteins (e.g. CRP)
Antibodies
Why do neutrophils die after phagocytosis? What does this form?
Phagocytosis depletes the glycogen stores of the neutrophil resulting in neutrophil death
The accumulation of dying neutrophils forms pus
How do NK cells determine whether to lyse cells or not?
They have inhibitory receptors which recognise self HLA and they have activating receptors that recognise heparan sulphate proteoglycans
The balance of these signals determines the response
They kill ‘altered self’ cells (e.g. malignancy or virus-infected cells)
Describe the main features of dendritic cells.
Reside in peripheral tissues
Express receptors for cytokines/chemokines
Express pathogen recognition receptors
Express Fc receptors for immunoglobulin
Capable of phagocytosis
Present processed antigens to T cells in lymph nodes to prime the adaptive immune response
Which receptor is involved in the migration of dendritic cells to lymph nodes?
CCR7
What are the key features of cells of the adaptive immune response?
Wide repertoire of antigen receptors (NOTE: not entirely genetically encoded because of VDJ recombination)
Highly specific
Clonal expansion
Immunological memory
Outline the selection of T cells in the thymus.
Cells with low and high affinity for HLA are deleted
Cells with intermediate affinity will survive (10%)
Which class of HLA do CD4 and CD8 cell recognise?
CD4: HLA-II
CD8: HLA-I
Outline the functions of CD4+ T helper cells.
Recognise peptides derived from extracellular proteins
These peptides are presented on HLA-II (HLA-DP, DQ, DR)
Provide help for the development of a full B cell response
Provide help for the development of some CD8+ T cell responses
List the subsets of CD4+ T cell.
Th1
Th2
Th17
Follicular T cell
Treg
Describe the function of CD8+ T cells.
Specialised cytotoxic cells
Recognise peptides derived from intracellular proteins presented on HLA class I (A, B and C)
Kills cell directly via perforin and granzyme or expression of Fas ligand
NOTE: particularly important against viral infections and tumours
In what form are B cells found in the periphery?
IgM B cells
What is the early IgM response of B cells?
If the B cell in the periphery engages an antigen it can cause an early IgM response where the cell differentiates into an IgM secreting plasma cell
What is a germinal centre reaction?
Dendritic cells present an antigen, thereby priming the CD4+ T helper cells
CD4+ T helper cells provide help for B cell differentiation via CD40L: CD40 interaction
This causes B cell proliferation
They undergo somatic hypermutation and isotype switching (from IgM to IgG/A/E)
They will become plasma cells and produce antibodies
NOTE: this process is dependent on CD4+ T helper cells
Which part of an antibody detects antigen and which part is responsible for its effector function?
Antigen is recognised by the antigen binding region (Fab) which is made up of the variable region of both heavy and light chains
Effector function is determined by the constant region (Fc) of the heavy chain
How is a secondary response to T-dependent antigens different from the primary response?
Lag time between antigen-exposure and antibody production is decreased (to 2-3 days)
Titres of antibody produced is increased
Response is dominated by IgG antibodies with high affinity
The response is independent of help from CD4+ cells
Where are pre-B cells found and what do they develop into?
Found in the bone marrow and develop into haematopoietic stem cells
In what form are complement proteins present in the circulation?
Inactive molecules
Outline the classical pathway of complement activation.
Activated by immune complexes
Formation of antibody-antigen complexes results in a conformational change exposing a binding site for C1 on the antibody
This binding results in activation of the cascade
NOTE: this is dependent on antibodies, therefore it requires prior activation of the adaptive immune response (i.e. it does NOT occur very early in the immune response)
Outline the mannose binding lectin pathway of complement activation.
Activated by the direct binding of MBL to microbial cell surface carbohydrates
This directly stimulates the classical pathway involving C4 and C2 (but NOT C1)
NOTE: this is NOT dependent on the adaptive immune response
Outline the alternative pathway of complement activation.
Directly triggered by the binding of C3 to bacterial cell wall components
This is NOT dependent on the adaptive immune response
Involves factors B, I and P
State an example of bacterial cell wall components that can activate complement in Gram-positive and Gram-negative organisms.
Gram-negative: lipopolysaccharide
Gram-positive: teichoic acid
What is the major amplification step of the complement cascade?
C3 convertase
What are the effects of complement fragments that are released during complement activation?
Increase vascular permeability
Opsonisation of immune complexes
Opsonisation of pathogens
Activation of phagocytes
Promotes mast cell/basophil degranulation
Punches holes in bacterial membranes
Give three examples of failure of neutrophil production and outline their mechanism.
Reticular dysgenesis
- Autosomal recessive severe SCID with no production of lymphoid or myeloid cells
- Caused by failure of stem cells to differentiate along lymphoid or myeloid lineage
Kostmann syndrome
- Autosomal recessive congenital neutropaenia
Cyclic neutropaenia
- Autosomal dominant episodic neutropaenia
- Occurs every 4-6 weeks
Name a phagocyte deficiency caused by failure of phagocyte migration.
Leucocyte adhesion deficiency
Describe the pathophysiology of leucocyte adhesion deficiency.
Caused by deficiency of CD18
CD18 normally combined with CD11a to produce LFA-1
LFA-1 normally binds to ICAM-1 on endothelial cells to mediate neutrophil adhesions and transmigration
A lack of CD18 means a lack of LFA-1, so neutrophils cannot enter tissues
During an infection, neutrophils will be mobilised from the bone marrow (HIGH neutrophils in the blood) but they will not be able to cross into the site of infection (NO pus formation)
Name a phagocyte deficiency caused by failure of oxidative killing mechanisms.
Chronic granulomatous disease
Outline the pathophysiology of chronic granulomatous disease.
Absent respiratory burst (deficiency of components of NADPH oxidase leads to inability to generate oxygen free radicals)
Excessive inflammation (persistent neutrophils and macrophage accumulation with failure to degrade antigens)
Granuloma formation
Lymphadenopathy and hepatosplenomegaly
What type of infection do patients with IL12/IL12R or IFN-gamma/IFN-gamma receptor deficiencies tend to present with?
Organisms that infect macrophages (usually atypical mycobacteria)
Name and describe the colour changes of two tests used to investigate chronic granulomatous disease.
Nitroblue Tetrazolium (NBT) – yellow to blue
Dihydrorhodamine (DHR) – fluorescent
NOTE: both of these tests are looking at the ability of neutrophils to produce hydrogen peroxide and oxidative stress
Which types of infection tend to occur in patients with phagocyte deficiency?
Recurrent skin and mouth infections
- Bacteria – Staphylococcus aureus, enteric bacteria
- Fungi – Candida albicans, Aspergillus fumigatus
Mycobacterial infections (particularly with IL12 deficiency)
- TB, atypical mycobacteria
state the expected neutrophil count, leucocyte adhesion markers, NBT/DHR test and presence of pus in Kostmann syndrome
Absent neutrophil count
Normal leucocyte adhesion markers
No neutrophils for NBT/DHR
No pus
state the expected neutrophil count, leucocyte adhesion markers, NBT/DHR test and presence of pus in leukocyte adhesion deficiency
High neutrophil count
Absent CD18
Normal NBT/DHR
No pus
state the expected neutrophil count, leucocyte adhesion markers, NBT/DHR test and presence of pus chronic granulomatous disease
Normal neutrophil count
Normal leucocyte adhesion markers
Abnormal NBT/DHR
Pus present
state the expected neutrophil count, leucocyte adhesion markers, NBT/DHR test and presence of pus in IL12/IFN-gamma deficiency
Normal neutrophil count
Normal leucocyte adhesion markers
Normal NBT/DHR
Pus present
Outline the treatment of phagocyte deficiencies.
Aggressive management of infection (infection prophylaxis and oral/IV antibiotics when needed)
Haematopoietic stem cell transplantation
Specific treatment for chronic granulomatous disease (e.g. IFN-gamma therapy
What is the main risk associated with NK cell deficiency?
Increased risk of viral infections (e.g. HSV, CMV, EBV, VZV)
Outline the treatment of NK cell deficiency.
Prophylactic antiviral drugs (e.g. aciclovir)
Cytokines (e.g. IFN-alpha to stimulate NK cytotoxic function)
Haematopoietic stem cell transplantation
What is the main clinical consequence of complement deficiency?
Increased susceptibility to infection by encapsulated bacteria
Which encapsulated bacteria are particularly problematic in patients with complement deficiency?
Neisseria meningitidis
Haemophilus influenzae
Streptococcus pneumoniae
NOTE: susceptibility to N. meningitidis is particularly common in properidin and C5-9 deficiency
What are the consequences of MBL deficiency?
Common but NOT associated with immunodeficiency
List some different complement deficiencies and state which is most common.
C1q
C1r
C1s
C2 – MOST COMMON
C4
Outline the clinical phenotype of complement deficiency.
Almost all patients with C2 deficiency have SLE
Usually have severe skin disease
Increased risk of infection
How does SLE lead to a functional complement deficiency?
Active lupus causes persistent production of immune complexes
This leads to consumption of complement components leading to a functional complement deficiency
C3 and C4 will be low
What are nephritic factors?
Autoantibodies that are directed against components of the complement pathway
They stabilise C3 convertases (break down C3) resulting in C3 activation and consumption
What disease is associated with the presence of nephritic factors?
Glomerulonephritis (usually membranoproliferative)
It may also be associated with partial lipodystrophy
Which complement components may be measured in assays and why?
C3 and C4 are measured routinely to monitor SLE (low in active lupus)
C1 esterase inhibitor – decreased in hereditary angio-oedema
Name two functional complement assays and describe what they are testing.
CH50 – test of classical pathway (C1, 2, 4, 3, 5-9)
AP50 – test of the alternative pathway (B, D, Properidin, C3, C5-9)
Outline the management of complement deficiencies.
Vaccination (especially against encapsulated organisms)
Prophylactic antibiotics
Treat infection aggressively
Screen family members
Describe the stereotypical presentation of C1q deficiency
Severe childhood-onset SLE with normal levels of C3 and C4
Describe the stereotypical presentation of C3 deficiency with nephritic factor
Membranoproliferative nephritis with abnormal fat distribution (partial lipodystrophy)
Describe the stereotypical presentation of C7 deficency
Meningococcus meningitis with a family history of a sibling dying aged 6
Describe the stereotypical presentation of MBL deficiency
Recurrent infections when neutropaenic following chemotherapy, but previously well
What is anisopoikilocytosis and which type of anaemia is it associated with?
Variations in size and shape of cells
Associated with iron deficiency anaemia (and thalassemia trait to a lesser degree)
What is basophilic stippling? List some causes.
Basophilic appearance of red blood cells caused by the presence of aggregated ribosomal material
Causes: beta-thalassemia trait, lead poisoning, alcoholism, sideroblastic anaemia
Which condition do hypersegmented neutrophils tend to be present in?
Megaloblastic anaemia
In which conditions might you see target cells (codocytes)?
Iron deficiency
Thalassemia
Hyposplenism
Liver disease
NOTE: target cells have a high SA: V ratio
What are Howell-Jolly bodies? Which condition are they associated with?
Nuclear remnants present within red blood cells
Present in hyposplenism
Why might a patient with coeliac disease have a low calcium and high ALP?
Reduced absorption of vitamin D leads to vitamin D deficiency which causes a secondary hyperparathyroidism
Which investigations are typically performed in Coeliac disease?
CRP and ESR
Serological tests
Upper GI endoscopy and distal duodenal biopsy (GOLD STANDARD)
Which HLA alleles are particularly common in patients with coeliac disease?
HLA-DQ2 (80%) – DQA10501 and DQB102 alleles
HLA-DQ8
Which type of anti-gliadin antibodies may be tested when investigating coeliac disease?
IgA antibodies
NOTE: it is not a very sensitive test and is outdated
What important test should be performed before checking anti-tTG and anti-endomysial antibody levels?
gA levels
IgA deficiency can produce false-negative results
What are the characteristic histological features of coeliac disease?
Subtotal villous atrophy with crypt hyperplasia
Intra-epithelial lymphocytes
List some other causes of villous atrophy.
Giardiasis
Tropical sprue
Crohn’s disease
Radiation/chemotherapy
Nutritional deficiencies
Graft-versus-host disease
Microvillous inclusion disease
Common variable immunodeficiency
How many intraepithelial lymphocytes would you expect to see in coeliac disease?
More than 20 IELs/100 epithelial cells
NOTE: normal would be < 20
List some other causes of high intraepithelial lymphocytes.
Dermatitis herpetiformis
Giardiasis
Cows’ milk protein sensitivity
IgA deficiency
Tropical sprue
Post-infective malabsorption
Drugs (NSAIDs)
Lymphoma
List some complications of coeliac disease.
Malabsorption
Osteomalacia and osteoporosis
Neurological disease (epilepsy and cerebral calcification)
Lymphoma (causes multi-focal T cell lymphoma)
Hyposplenism
How often should a DEXA scan be performed in coeliac patients?
Every 3-5 years
List some conditions that are frequently associated with coeliac disease.
Dermatitis herpetiformis
Type 1 diabetes mellitus
Autoimmune thyroid disease
Down syndrome
SLE
Autoimmune hepatitis
Name a defect in stem cells that causes SCID and name the gene that is mutated.
Reticular dysgenesis – adenylate kinase 2 (AK2)
NOTE: this is a mitochondrial energy metabolism enzyme
What is the most common type of SCID?
X-linked SCID
Describe the typical cell counts you would expect to see in X-linked SCID.
Very low T cells
Very low NK cells
Normal or increased B cells
Low immunoglobulin
Describe the pathophysiology of ADA deficiency.
ADA – adenosine deaminase
This is an enzyme required by lymphocytes for cell metabolism
ADA deficiency leads to failure of maturation along any lineage
Describe the typical cell counts you would expect to see in ADA deficiency.
Very low T cells
Very low B cells
Very low NK cells
Describe the clinical phenotype of SCID.
Unwell by 3 months age (once protection by maternal IgG dissipates)
Infections of all types
Failure to thrive
Persistent diarrhoea
Unusual skin disease (colonisation of infant’s empty bone marrow by maternal lymphocytes can cause a graft-versus-host disease-like condition)
Family history of early death
Which cellular insults are CD8+ T cells particularly important in protecting against?
Viral infections
Tumour
Outline the immunoregulatory functions of CD4+ T cells.
Provide help to mount a full B cell response
Provide help for some CD8+ T cell responses
In which group of syndromes does the thymus gland fail to develop properly?
22q11.2 deletion syndromes (e.g. Di George syndrome)
This is characterised by failure of development of the pharyngeal pouch
What are the main clinical features of 22q11.2 deletion syndromes?
Facial abnormalities (high forehead, low set ears, cleft palate, small mouth and jaw)
Underdeveloped parathyroid gland (resulting in hypocalcaemia)
Oesophageal atresia
Underdeveloped thymus
Complex congenital heart disease
What are the immunological consequences of an underdeveloped thymus gland?
Normal B cell count
Low T cell count
Homeostatic proliferation with age (T cell numbers increase with age)
Immune function is mildly impaired and tends to improve with age
What condition is caused by a deficiency of MHC Class II? Briefly outline its pathophysiology.
Bare lymphocyte syndrome (BLS) type 2
Deficiency of MHC Class II means that CD4+ T cells cannot be selected in the thymus leading to CD4+ T cell deficiency
Describe the typical cell counts that you would expect to see in Bare Lymphocyte syndrome type 2.
Normal CD8+
Very low CD4+
Normal B cell count
Low IgG
NOTE: BLS Type 1 is a similar condition caused by failure of expression of HLA Class I
Outline the clinical phenotype of bare lymphocyte syndrome.
Unwell by 3 months of age
Infections of all types
Failure to thrive
Family history of early death
What are the common clinical features of T lymphocyte deficiencies?
Viral infections (e.g. CMV)
Fungal infections (e.g. PCP)
Some bacterial infections (e.g. TB, salmonella)
Early malignancy
NOTE: disorders of T cell effector function include defects in cytokine production, cytokine receptors and T-B cell communicatio
List some investigations that may be used for suspected T cell deficiencies.
Total white cell count and differentials
Lymphocyte subsets
Immunoglobulins
Functional tests of T cell activation and proliferation
HIV test
How are lymphocyte counts different in children compared to adults?
Higher in children compared to adults
Outline some management approaches for immunodeficiency involving T cells.
Aggressive prophylaxis/treatment of infection
Haematopoietic stem cell transplantation
Enzyme replacement therapy (e.g. PEG-ADA for ADA deficiency)
Gene therapy
Thymic transplantation (in Di George syndrome)
What determines the class of immunoglobulin?
Heavy chain
What determines the effector function of immunoglobulin?
Constant region of the heavy chain
Outline the pathophysiology of Bruton’s X-linked hypogammaglobulinaemia.
Prevents the maturation of B cells at that point at which they emerge from the bone marrow
Caused by an abnormal B cell tyrosine kinase (BTK) gene
This results in the absence of mature B cells and, hence, an absence of antibodies
Outline the clinical phenotype of Bruton’s X-linked hypogammaglobulinaemia.
Boys present in the first few years of life
Recurrent bacterial infections (e.g. otitis media, pneumonia)
Viral, fungal and parasitic infections
Failure to thrive
Outline the pathophysiology of X-linked hyper IgM syndrome.
Blocks the maturation of IgM B cells through germinal centres into B cells that produce other classes of immunoglobulin (i.e. prevents germinal centre reactions)
Caused by a mutation in the CD40 ligand gene
This is technically a T cell problem, however, it means that CD4+ T helper cells cannot provide help to B cells so they cannot undergo germinal centre reactions
NOTE: CD40 ligand is encoded on Xq26
Describe the typical biochemical results you would expect to see in X-linked hyper IgM syndrome.
Normal B cells
Normal T cells
No germinal centre reactions
High IgM
Absent IgG, IgA and IgE (failure of isotype switching)
Outline the clinical phenotype of X-linked hyper IgM syndrome.
Boys present in the first few years of life
Recurrent infections (mainly bacterial)
Subtle abnormality in T cell function (predisposes to PCP, autoimmunity and malignancy)
Failure to thrive
What is common variable immunodeficiency and what are the main features?
A group of disorders caused by some form of failure of differentiation of B lymphocytes
Defined by:
· Marked reduction in IgG, IgA and IgE
· Poor/absent response to immunisation
· Absence of other defined immunodeficiency
Outline the clinical phenotype of common variable immunodeficiency.
May present in adults or children
Recurrent bacterial infection (often severe)
Pulmonary disease (e.g. interstitial lung disease)
GI disease (e.g. IBD-like disease)
Autoimmune disease (e.g. AIHA)
Malignancy (e.g. NHL)
What are the clinical features of antibody deficiency?
Bacterial infections (e.g. Staphylococcus)
Toxins (e.g. tetanus)
Some viral infections (e.g. enterovirus)
List some investigations that may be used for suspected B cell deficiencies.
Total white cell count and differential
Lymphocyte subsets
Serum immunoglobulins and protein electrophoresis
Functional tests of B cell function (e.g. measure IgG antibody against a specific pathogen (e.g. S. pneumoniae), if this is low, vaccinate using a killed vaccine and check levels again in 6-8 weeks)
NOTE: IgG production is a surrogate marker for CD4+ T helper cell function
Which peak represents immunoglobulin in protein electrophoresis?
Gamma peak
What is the difference between autoinflammatory and autoimmune diseases?
Autoinflammatory – driven by components of the innate immune system
Autoimmune – driven by components of the adaptive immune system
Mutations in which pathways are implicated in monogenic autoinflammatory disease?
Innate immune cell function – abnormal signalling via key cytokine pathways involving TNF-alpha or IL-1