Immune system Flashcards
Why have an immune system?
- ubiquitous microbes
- the body has approximately 10 trillion cells, 1 trillion of these are dermal bacteria on our skin which we cannot wash off, and many intestinal bacteria
- many of these are harmless
- many are helpful (the microbiome for example)
- some are pathogenic (opportunistic - acquire the ability to cause a disease, ex: e-coli; most of them are benign but some can cause a lot of harm)
microbiome
ecosystem of bacteria in our intestinal tract
- has a huge impact on intestinal life and life long health
- birth canal in delivery
what are the good characteristics of having an immune system?
when the appropriate response is taken:
- can combat infection
- immune clearance (removing parasite or infection)
- tissue healing (to normal or almost normal)
- can prevent future infections
what are the bad characteristics of our immune system?
when an inappropriate response is made:
- the infection wins
- can be because of an overactive immune response (allergies - overactive response to something benign, in severe cases can cause extreme vasodilation, making blood pressure too low = death)
- or can be cause if immune system does not respond at all - immunodeficiency (when we get older this happens)
- can cause collateral damage (ex: getting a cut, becomes swollen, red, hot)
- system can be exploited by pathogens or parasites
which organ system is involved in our immune system
lymphatic system
which organs are involve din our immune system?
1) thymus - in chest, gets smaller as we get older (stops growing at puberty)
2) lymph nodes - scattered throughout the body where lymph moves through and where immune cells congregate
3) spleen - which we can live without, immune cell gathering place
4) bone marrow - source of all immune cells
5) appendix? - meeting point for cells, can live without
which two tissues are involved in our immune system?
1) MALT - mucosa associated lymphoid tissue
- this is not an organ, it is a tissue within an organ, part of the mucosa
2) GALT - gut associated lymphoid tissue
- where the immune system learns what’s outside the body
which two areas are said to be “immune privileged”?
1) the brain
2) the cornea
immune privileged refers to the fact that the immune system does not reach here
pathogen
“organism” that causes disease (we consider a virus a pathogen but it is not an organism
-patho = disease, gen = to create
immunogen
something that causes an immune response
-can be a whole organism or part of an organism
antigen
- always part of an organism, majority are proteins
- type of immunogen
- something that causes antibodies to be made - specific immune response (antigen and immunogen are used interchangeably)
antibody
molecule specific to an antigen
-molecule that we make that binds to a single antigen (to the epitope specifically)
epitope
one part of an antigen
- could be very small (15-25 AAs)
- this is the exact spot where the antibody binds
innate immunity is the ____ line of defence
1st
innate immunity
- 1st line of defence which is constantly active and exhibits a rapid response (almost immediate)
- a lot of the measures taken are preventative
- non-specific, antigen independent and reaches a broad range - ingests any bacteria, responds to all equally
- this system is not improved upon repeated exposure (no memory)
what 2 physical barriers are included in the innate immunity?
1) physical prevention - skin
- single layer epithelial cells in gut, prevents bacteria form coming in unless damaged
2) mucous membranes - keeps bacteria out
what are the 4 physiological barriers to infection
1) temperature
- increase in temperature makes environment less hospitable for bacteria - inflammatory reactions are warm
2) pH
- low pH of stomach, pH of sweat
3) enzymes
- in our tears and in mucus of nasal cavity, we secrete lysozyme - breaks down bacteria cell walls
4) compement
- proteins in our blood, prevents bacteria from reaching blood
what are the primary functions of complement
- lysis of foreign cells and bacteria (break down membrane and making them explode)
- a cascade of 30+ proteins
- pore (MAC) formation
MAC: a ring of proteins that forms a hole
-[] of solutes higher in cytoplasma than in ISF, without MAC, controls water rushing in
what are the secondary functions of complement?
- activation of inflammation
- opsonization of bacteria (covering them with something so they’re easier for immune cells to eat)
- immune clearance (getting rid of parasites)
what are the two ways in which complement can be “activated”?
1) having some of C1 proteins bind to foreign cell (recognize it) - this makes the pathway begin
2) can have a specific antigen on the cell surface, with an antibody which binds to pathogen and triggers the pathway (very specific)
regardless of mechanism, the end result is the same (MAC)
what does MAC stand for?
membrane attack complex, this is the end result of complement activation
what are the 4 granulocytes
1) basophils
2) mast cells
3) eosiniophils (stains blood)
4) neutrophils
which is the most common WBC?
neutrophils
what are the 5 phagocytes?
1) eosinophils
2) neutrophils
3) monocytes
4) macrophages
5) dendritic cells
what are the 5 antigen presenting cells?
1) monocytes
2) macrophages
3) dendritic cells
4) lymphocytes
5) plasma cells
name the lymphocytes
T cells, B cells, Plasma cells, and NK cells
I am a WBC that has lots of granule and many vesicles containing things such as enzymes, histamines, etc.
What am I ?
granulocytes
I am a WBC that ingests things and I am never found in the blood but you will find me in tissue
what am I ?
phagocytes
I am a WBC that helps the acquired immune system see pathogens/parasites
Who am I?
antigen presenting cell
neutrophils
- 50-70% of WBCs
- polymorphonuclear cells (another word for neutrophil)
- irregularly shaped nucleus, between 3-5 lobes
- short lived, highly effective phagocytes (1 or 2 days)
- early recruits during infection
eosinophils
- 1-3% of WBC
- most hang out near epithelia - see them in gut and lungs, these are areas we tend to get infected with larger parasites
- defence against large parasite
- phagocytotic cells - forms pocket on parasite and kills it
basophils and mast cells
- rare
- these are non-phagocytic - do not ingest anything
- release compounds such as histamine or chemotaxins
- histamine causes vasodilation, more blood = more neutrophils to infection site
- chemotaxins are attractive molecule - neutrophils or other WBCs detect it and move towards it
what are the two ways in which a cell can die
1) apoptosis
2) necrosis
apoptosis
- programmed cell death
- all content of the cell remain in little compartments after the cell dies, this makes it easier to clean up by other cells (who eat them)
- energy is required
necrosis
- cell death
- cell swells and pops - the severity of the disease is greater when cells die from necrosis
- no energy required to die this way
- pneumonia is an example of necrosis, all the stuff that was inside the cell goes into body once it explodes
macrophages
- these come from monocytes (which are 1-6% of WBCs)
- residential cells
- very long lived - up to months, keep tissue clean
dendritic cells
residential cells
-long membrane processes
_____ immunity is not a specific response whereas ____ immunity is very specific
innate, acquired
what are PAMPs?
pathogen associated molecular patterns
-these allow us to recognize which cells are foreign so we don’t kill our own cells
what are the 4 PAMPs?
1) Gram+ bacteria - make peptidoglycan
2) Gram- bacteria - make lipopolysaccharides (LPS)
3) fungi - make zymosan (yeast cell)
4) viruses - make dsDNA, ssRNA
these associated compouds are then recognized by TLRs, activating their associated macrophage
Toll-like receptors (TLRs)
a class of proteins that play a key role in the innate immune system. They are single, membrane-spanning, non-catalytic receptors usually expressed on sentinel cells such as macrophages and dendritic cells, that recognize structurally conserved molecules derived from microbes
- these activate their associated macrophage
- PAMPs activate these
which has a second outer membrane? Gram+ or Gram-?
gram -, gram+ has a thicker cell wall
briefly explain bacterial reocognition
PAMPs bind to TLRs on macrophages or mast cells which activates them, leading to phagocytosis
phagocytosis
- ingesting a foreign particle - into a phagosome (body/compartment within the cell)
- there is a lisosome inside the cell that contains enzymes that can break down/damage DNA
- vessicles fuse together (phagolysosome) and kill bacteria by O2-independent mechanisms or O2 dependent mechanisms
- degraded material can be used by the cell, or dumped out and removed by kidneys - presented to T cells
phagocytosis: O2 independent mechanisms
- a way of killing bacteria that does not require O2
- lysosome and other hydrolytic enzymes (breaks down pepsidoglycan)
phagocytosis: O2 dependent mechanisms
- a way of killing bacteria that is O2 dependent
- reactive species - cells consume O2 and convert it inro molecules, bacteria gets chopped up into pieces
O2 dependent killing
- reactive oxygen species (ROS)
- reactive nitrogen species (RNS)
- respiratory burst - rapid increase in oxygen consumption
- oxygen is converted into super-oxide, creating hypochlorous acid
- can make reactive nitrogen species as well
-this can make very dangerous substances (ex: peroxynitrie)
lymphocytes mainly play a role in acquired immunity, but what is the one INNATE lymphocyte?
the natural killer (NK) cell
explain the death by NK cell
- these are innate lymphocytes (the only ones)
- they kill altered self cells (virus infected, cancerous)
- examine every cell they see to see if it’s healthy
- if a cell gives a positive signal AND a negative signal, it is not killed
- if a cell ONLY gives a positive signal, it will be targeted by the NK cell
when talking about death by NK cells, why don’t unhealthy cells give off a negative signal?
- unhealthy cells release interferon alpha - which stops the negative signal
- PERFORIN punches a hole in the cell membrane and GRANZYME B goes through the opening and induces apoptosis
chemotaxins - def
molecules that attract phagocytes to a site of infection
cytokines - def
proteins released by one cell that affect the growth or activity of another
opsonins - def
proteins that coat pathogens so that phagocytes recognize and ingest them
antibodies - def
proteins secreted by B cells that fight specific invaders