Imaging the Nervous System Flashcards

1
Q

Why do we visualise cells of the nervous system? (3)

A
  1. Cell Morphology
  2. Cell Projections and Connections
  3. Protein Expression
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2
Q

How does a fluorescent microscope work? (5)

A
  • Excitationlight is shoneonto thesample
  • Excitation filterdetermineswavelength of excitationlight
  • Excitation light isabsorbedby the fluorescent tag
  • Electronsareexcited
  • Emissionlight isreleasedas the electrons relax
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3
Q

How does a confocal microscope work? (6)

A
  • Excitationlight from a laser is shoneonto thesample
  • Excitation pinholecreates a verynarrow beam of the excitation lightonto the sample
  • Excitation light isabsorbedby thefluorescent tag in particularplane offield
  • Electronsareexcited
  • Emissionlight isreleasedas theelectrons relax
  • Emission filteris selective for the lightemitted from thespecific plane
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4
Q

What does SEM allow us to see? And Why?

A
  • 3D image of surface
  • Electronsbounceof the surface
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5
Q

What does TEM allow us to see? And why?

A
  • Internal structure
  • Electronspass throughsample
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6
Q

How is tissue prepared for viewing? (6)

A
  1. Tissue is harvested and preserved by being snap freezing (straight into liquid nitrogen, prevents ice crystals) or chemically fixed e.g. PFA.
  2. Tissue is cut whilst frozen (easily) or if chemically fixed it is then embedded in wax or resin. A Microtome or cryostat is used to cut the tissue. µm thick.
  3. Tissue is mounted onto a glass slide (Snap frozen tissue is chemically fixed e.g. PFA)
  4. Staining
  5. Coverslip
  6. Image
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7
Q

What colour is Hematoxylin?

A

Dark blue/Violet

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8
Q

What charge does Hematoxylin have?

A

Positively charged/basic

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9
Q

What does Hematoxylin bind to?

A
  • Binds tonegativelychargedDNAandRNAin thenucleus
  • Binds to negatively chargedRNAin theroughendoplasmic reticulum(RER)
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10
Q

What colour is Eosin?

A

Pink

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11
Q

What charge does Eosin have?

A

Negatively charged/acidic

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12
Q

What does Eosin bind to?

A

Binds topositivelychargedamino acid sidechainsin thecytoplasm

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13
Q

What are the other names for Nissl Stain?

A

aniline, thionine, orcresylviolet

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14
Q

What colour is Nissl Stain?

A

Dark blue/Violet

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15
Q

What charge does Nissl Stain have?

A

Positively charged/basic

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16
Q

What does Nissl Stain bind to?

A
  • Binds tonegativelychargedDNAandRNAin thenucleus
  • Binds to negatively chargedRNAin therough endoplasmic reticulum(RER)
17
Q

What colour is Golgi Stain?

A

Black

18
Q

How does the Golgi Stain stain tissue?

A

Impregnates tissue withpotassium dichromate andsilver nitrate

19
Q

What colour is Osmic Acid?

A

Black

20
Q

What does Osmic Acid bind to?

A

Binds to lipids, myelin is a fatty sheath.

21
Q

What is another use of Osmic Acid?

A

A fixative for tissue in Electron Microscopy.

22
Q

What is immunohistochemistry?

A

Uses Antibodies which are fluorescent as it can be tagged with an enzyme to form an enzyme complex which can produce a dye precipitate in the presence of its substrate as it binds to the protein\antigen of interest. Therefore antibodies can be used as cell markers and to view protein expression.

23
Q

How are antibodies produced for immunohistochemistry?

A
  • Antibody raised against antigenofinterest
  • Antigen introducedto animal
  • Stimulatesimmune responseandantibody production
  • Collectand purify antibodies
24
Q

What is direct immunohistochemistry?

A

Single antibody binds directly to the antigen and are tagged with fluorophore or an enzyme complex.

25
Q

What is Indirect immunohistochemistry?

A

Signal amplification.
Uses two antibodies - a primary and secondary.
- The primary antibody binds directly to the antigen.
- The secondary antibody binds to the primary antibody and is tagged with fluorophore or an enzyme complex

26
Q

How is the antigen named?

A

Name of antigen e.g., GFAP

27
Q

How is the primary antigen named?

A

Animal that produced it anti-antigen E.g., Rabbit anti-GFAP.

28
Q

How is the secondary antigen named?

A

Animal that produced it anti- animal that produced primary antibodies e.g., Donkey anti-rabbit.