I-Biochemistry-Basics Flashcards
biochem flashcards
Asymetrical distrubtion of electrical charges are classified as this.
Dipole (polar) molecule
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This is a bond that can be created between hydrogen atoms of amino acids and water molecules.
Hyrdogen bonds
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Why are Bicarbonate and other buffers labeled as Amphoteric molecules?
They can act as an acid or base
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Phospholipids and Bile salts share this similar characteristic.
Amphipathic
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True or False: If pH>pka, the predominant form of a weak acid is its Deprotonated form.
True. A pH>pKa a means lower H+ concentration; increases Weak acids to donate its H+, and decrease Weak bases to accept H+
biochem flashcards
True or False: If pH>pKa, the charged form of Weak bases are more numerous
False. A pH>pKa a means lower H+ concentration; increases Weak acids to donate its H+, and decrease Weak bases to accept H+
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True or False: If pH<pka, the predominant form of a weak base is its Charged form.
True. A pH<pKa a means higher H+ concentration; increases weak bases to accept H+ thus making them charged
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Ture or False: if pH<pka, the weak acids will have a tendency to be unprotonated
False. A pH<pKa a means higher H+ concentration; increases weak acids tend to accept H+ thus making them protonated.
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Why are drugs with High pKas are not well absorbed it the stomach?
The pH<pKa causing the drug to be in its charged.
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This is required by an enzyme to function properly?
Co-factors
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CO acts on O2 by increasing this property, hence the use of 100% O2
Km is increased
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What type of Inhibition cause Km to change but Vmax to remain the same
Competitive inhibition
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What type of Inhibition cause Km to remain unchanged but Vmax to decrease
Non-competitive Inhibition
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This refers to the heat produced by a reaction
Enthalpy or _H
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The amount of randomness of a reaction is measured as
Entropy or _S
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This parameter can predict whether a reaction is spontaneous or not
_G or Free Energy
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Substance A & Substance B readily interchange with each other. Thus its _G is?
_G = 0, or in a state of Equilibrium
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Substance A cannot change to Substance B unless given energy. Its _G must be?
_G > 0, or an Endergonic/Endotermic Reaction
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Substance A will always change to Substance B when left alone. Its _G must be?
_G < 0, or an Exergonic/Exothermic Reaction
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True or False: High Enthalpy and Low Entropy will proceed spontanously.
False. _G = __H-T__S will cause _G>0
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Phosphoglycerate Kinase, Pyruvate Kinase, & Succinate Thiokinase enzymes generate ATP by?
Substrate Level Phosphorylation
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NADH and FADH2 are utilized to generate ATP by?
Oxidative Phosphorylation
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The greatest quantitative source high energy phosphate in anaerobes?
Substrate Level Phosphorylation
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This produces more high energry phosphate from glucose because of the presence of O2?
Oxidative Phosphorylation
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The ETC is specifically found where?
Inner Membrane of the mitochondria
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Ribloflavin is to FAD as _________ is to NAD
Niacin (Vit. B3)
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Part of the ETC that dehydrogenates NADH?
Complex I (NADH Dehydrogenase)
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Part of the ETC that is an enzyme more associated to the Kreb’s Cycle?
Complex II (Succinate Dehydrogenaes)
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Coenzyme Q is unique because?
It’s the only NON-PROTEIN part of the ETC
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True or False: Cytochrome is c is the only FIXED part of the ETC
False, It is the ONLY MOVABLE part of the ETC
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The heme part of this ETC structure contains Fe like the heme found in RBC.
Complex III (Ubiquinol)
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Cytochrome oxidase differs from Complex III in that it contains this mineral instead of mineral
Complex IV (cytochrome oxidase) contains Copper (Cu) in its heme
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Also known as Ubiquinone
Complex Q
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How does NADH produce 3 ATP?
Its high energy electron drives the H-pumps at Complex I, III, IV
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O2 is need by this Complex in order to function properly
Complex V (ATP synthase Complex)
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Cyanide poisoning inhibits which complex
Complex IV (cytochrome oxidase)
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Barbiturates affects ETC by inhibiting?
Complex I (NADH Dehydrogenase)
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Dimercaprol, used in heavy metal poisoning, can also inhibit this ETC complex
Complex III (Ubiquinol)
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Mitochondrial disease associated with the lose of ALL ETC complexes
Fatal Infantile Mitochondrial Myopathy
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Mitochondrial Encephalopathy, Lactic Acidosis, Stroke-like episodes are associated with which complex?
Complex I (NADH Dehydrogenase)
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Leigh’s Disease
Complex IV deficiency
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Kearn’s-Sayre Syndrome
Complex II (Succinate Dehydrogenaes) deficiency
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Leber’s Hereditary Optic Neuropathy
Complex III (Ubiquinol) deficiency
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Should a father afftect with Kearn’s Sayre Syndrome be worried about passing his illness on to his children?
No, ALL Mitochondrial inherited disease are ONLY passed on through the maternal mitochondria
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Prinicple effects caused by Uncouplers on the ETC
Inc. Permeability of Inner memberane to H+, Loss of Proton Gradient to drive ATP synthase complex
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These uncoupling proteins are created by neonates to prevent Hypothermia
Thermogenins
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Apsirin is a notorius uncoupler of the ETC leading to this dreaded toxic side effect
Hyperpyrexia
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These are by-products of ETC that are toxic cells but also utilized to protect the body
Reactive Oxygen Species
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The presence of this enzyme is used to differentiate Gram (+) cocci
Catalase
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This is the result of sudden ETC activity after a prolonged hypoxic effect leading to further tissue injury
Reperfusion Injury