How are cells studied? Flashcards

1
Q

where are unicellular eukaryote cultures grown

A

in YEPD liquid media or YEPD agar plates

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2
Q

YEPD

A

Yeast Extract + Peptone (amino acids) + Dextrose (sugar)

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3
Q

what can plant and animal cells do in vitro?

A

live, grow, and multiply

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4
Q

in vitro

A

outside the body

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5
Q

what are multicellular eukaryotes fed in vitro

A

Eagle’s minimal essential media (MEM)

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6
Q

what is MEM composed of?

A
  1. amino acids (some essential)
  2. vitamins
  3. salts
  4. glucose
  5. penicillin (antibiotic)
  6. serum (growth factor proteins)
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7
Q

serum

A

growth factor proteins that give cells permission to reproduce

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8
Q

essential amino acids

A

AAs not produced in the body

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9
Q

3 popular cell lines

A
  1. PTK1 from kangaroo rat kidney in 1961
  2. MDCK from cocker spaniel kidney in 1958
  3. HeLa from Henrietta Lacks cancer cells in 1951
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10
Q

subcellular fractionation

A

the isolation and purification of cellular organelles and macromolecules using centrifugation

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11
Q

3 steps of subcellular fractionation

A
  1. homogenization
  2. isolation
  3. purification
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12
Q

ultracentrifuge

A

machine that spins things

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13
Q

what is the max spin speed and max force of an ultracentrifuge

A

100 000 rpm generating 600 000 Gs

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14
Q

2 safety precautions of an ultracentrifuge

A
  1. must be refrigerated or it will melt

2. armored chambers contain the rotor in case it breaks

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15
Q

homogenization

A

breaks plasma membrane to release cell contents

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16
Q

what does homogenization turn cells into

A

cell homogenate

17
Q

cell homogenate

A

the inner contents of a cell

18
Q

4 methods of homogenization

A
  1. break cell with high-frequency sound
  2. force cells through a small hole using high pressure
  3. use mild detergent to make holes in the membrane
  4. shear cells between close-fitting rotating plunger and thick walls of glass
19
Q

how is isolation achieved

A

differential centrifugation

20
Q

differential centrifugation

A

method of separating cell components according to whether they sediment or not

21
Q

what do larger and more dense components do in differential centrifugation?

A

form a pellet

22
Q

what do smaller and less dense components do in differential centrifugation?

A

form a supernatant

23
Q

low speed centrifugation

A

1000 Gs for 10 min

24
Q

what does low speed pellet

A

whole cells, nuclei, cytoskeletons

25
medium speed centrifugation
20 000 Gs for 20 mins
26
what does medium pellet
mitochondria, lysosomes, peroxisomes
27
high speed centrifugation
80 000 Gs for 60 mins
28
what does high speed pellet
microsomes, other small vesicles
29
microsomes
pieces of ER
30
very high speed centrifugation
200 000 Gs for 120 mins
31
what does very high speed centrifugation pellet
ribosomes, viruses, large macromolecules
32
2 different methods of purification
1. velocity centrifugation | 2. equilibrium centrifugation
33
2 other names for velocity centrifugation
1. density gradient centrifugation | 2. rate zonal centrifugation
34
velocity centrifugation
purifies cell components according to sedimentation rate
35
velocity centrifugation procedure
- fill tube with concentration gradient of sucrose - fast sedimenting components will fall to the bottom - collect bands by puncturing the bottom of the tube
36
equilibrium centrifugation procedure
- fill tube with concentration gradient of sucrose | - at equilibrium, components migrate to regions of their own density
37
equilibrium centrifugation
purifies cell components according to buoyant density