host genetics and infectious disease Flashcards

1
Q

how is blood group associated with malaria vivax?

A

malaria vivax can only infect duffy positive patients

these are patients with DARC expressed on their surface

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2
Q

what are some genes associated with malaria that affect the RBC?

A

genes associated with the structure of RBC:

  • alpha globulin
  • beta globuln
  • erythrocyte band 3
  • glycophorin A
  • glycophorin B
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3
Q

what gene mutation do people who are immune to HIV have?

A
  • homozygous for 32 bp deletion in the CCR5 gene
  • Frameshift mutation and premature stop codon
  • Protein is not expressed at cell surface
  • CCR5 is a co-receptor for HIV
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4
Q

what happens to your tuberculin test if you have a poor immune response to primary TB infection?

A

it will be negative

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5
Q

what are evolutionary considerations for host genetics an infectious disease?

A
  • infectious diseases are a force for human evolution
  • host defence genes are more diverse than other genes
  • human immune response genes are more polymorphic than any other species
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6
Q

how are host genes seen to be related to infectious disease?

A
  • many can be exposed to an infection but only a few will develop the disease
  • there is familial clustering of genetic diseases
  • there is interpolation difference in the prevalence of infectious diseases
  • adoption studies show that adoptees are 5.8 times more at risk of ID if their parents died from it
  • there is high concordance in ID among monozygotic twins compared to dizygotic
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7
Q

why do we identify genes that predispose/protect from disease?

A
  • to understand disease pathogenesis

- to identify the pathways important for immunity when designing therapies against ID

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8
Q

what are the different ways we can identify human ID susceptibility genes?

A
  • animal models
  • mendelian disease in humans
  • analysys through gene sequencing
  • family linkage studies vs population based association studies
  • quantative trait analysis
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9
Q

what type of polymorphism is sickle cell?

A

b-globulin

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10
Q

which binding site is mutated in Duffy negative individuals?

A
  • GATA1

- the transcription factor GATA-1 activates DARC gene

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11
Q

why do duffy individuals express DARC on heir leucocytes?

A

because GATA1 binding is only required for expression of DARC on erythrocytes

DARC can still be expressed on leukocytes without GATA1 binding

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12
Q

how does maraviroc work against HIV?

A

blocks the CCR5 receptor for HIV

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13
Q

why is TB a complex trait?

A

infection is influenced by…

  • pathogen
  • host immune response
  • environment
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14
Q

what are some mutations in immune response molecules associated with malaria?

A
HLA-B 
HLA-DRB1 
TNF 
iNOS 
ABO blood group 
ICAM-1
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15
Q

what are some groups of people that are at risk of TB?

A
  • Extremes of age
  • co infection with HIV
  • post measles
  • diabetes
  • renal disease
  • steroid therapy
  • anti-TNF treatment
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16
Q

what mutations are associated with susceptibility to TB?

A
  • INFGR1 - a premature stop codon leads to absence of transmembrane or intracellular membrane signalling proteins
  • IL12
17
Q

What is the role of INFGR1?

A
  • it is expressed on macrophages

- it allows T cell activation of macrophages via INFG release

18
Q

what is the inheritance pattern of INFGR1 mutation?

A
  • recessive, which is more severe as has no signalling function
  • dominant which is less severe and leads to partial signalling of INFGR1