HIV structuture Flashcards

1
Q

What genes are present in the HIV genome?

A

The HIV genome contains the typical retroviral genes gag, pol, and env flanked by long terminal repeats (LTRs).

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2
Q

What does the gag gene code for?

A

The gag gene codes for the structural proteins capsid (CA), matrix (MA), and nucleocapsid (NC).

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3
Q

What enzymes are encoded by the pol gene?

A

The pol gene encodes the enzymes reverse transcriptase (RT), protease (PR), and integrase (IN).

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4
Q

Which glycoproteins are encoded by the env gene?

A

The env gene encodes the glycoproteins gp120 and gp41.

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5
Q

How many regulatory genes does HIV have and what are they?
A

A

: HIV has six regulatory genes: tat, rev, nef, vif, vpr, and vpu.

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6
Q

What is the function of the Tat protein in HIV?

A

Tat enhances proviral transcription.

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7
Q

What role does the Rev protein play in HIV?

A

Rev is essential for the export of incompletely or unspliced viral mRNAs into the cytoplasm.

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8
Q

Why are the remaining regulatory genes called “accessory” genes?

A

They are called “accessory” because they are not absolutely required for replication in some cell culture systems but are essential for viral spread in vivo.

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9
Q

To which genus and family does HIV-1 belong?

A

HIV-1 belongs to the Lentivirus genus of the Retroviridae family

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10
Q

Describe the shape and size of the HIV virion.

A

The HIV virion has a spherical shape and a diameter of about 100–130 nm.

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11
Q

What composes the viral envelope of HIV?

A

The viral envelope is composed of a lipid membrane derived from the host cell and contains cellular proteins and about 7–12 trimeric complexes of viral envelope (Env) protein.

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12
Q

What are the components of the Env protein in HIV?

A

Env consists of the external glycoprotein 120 (gp120) and the transmembrane glycoprotein 41 (gp41).

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13
Q

What is the role of gp120 in HIV?

A

Gp120 mediates viral attachment.

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14
Q

What is the function of gp41 in HIV?

A

Gp41 is critical for viral fusion.

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15
Q

With which protein is gp41 associated in HIV?

A

Gp41 is associated with the viral p17 matrix protein.

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16
Q

What does the HIV capsid consist of?

A

The HIV capsid consists of the viral Gag protein, p24.

17
Q

Describe the RNA contained within the HIV capsid.

A

The HIV capsid contains two single strands of viral RNA with positive polarity and a length of close to 10,000 nucleotides.

18
Q

What proteins and factors are associated with the viral RNA in HIV?

A

The RNA is associated with nucleocapsid proteins, RT, IN, some copies of the viral protease, the accessory Vif, Vpr, and Nef proteins, and cellular factors like tRNAlys3.

19
Q

What is the role of tRNAlys3 in HIV?

A

tRNAlys3 is used as a primer for reverse transcription.