head start (pg 4 - 30) ALSO DO HEART REVISION Flashcards
what is metabolism?
in a living cell thousands of biochemical reactions take place every single second. The sum of these reactions is called metabolisms
what is a metabolic pathway?
a single chain of biochemical reactions that take place in a living cell
what would happen to the biochemical reactions inside a body if they didn’t have enzymes?
these reactions would take place very slowly at normal body temperature
what are enzymes?
enzymes are biological catalysts that increase the rate of reactions
how do enzymes act as catalysts?
a reaction that needs a high activation energy can’t start at a low temperature of 37 degrees (i.e. body temperature). Enzymes reduce the activation energy
what type of proteins are enzymes?
globular proteins (because they’re roughly spherical)
what does the order of amino acids in an enzyme determine?
its structure, and so how it works
give 2 examples of what enzymes help with
enzymes can be involved in breaking down molecules or building molecules. For example:
- Digestive enzymes are important in the digestive system, where they help to break down food into smaller molecules, e.g. carbohydrases break down carbohydrates
- enzymes involved in DNA replication help to build molecules, e.g. DNA polymerase
what is the substance that’s acted upon by an enzyme called?
the substrate
what is the active site?
the region on the surface of the enzyme molecule where a substrate molecule can attach itself. It’s where the catalysed reaction takes place
how quickly do enzymes break down substrate molecules?
almost as soon as the enzyme-substrate complex has formed, the products of the reaction are released and the enzyme is ready to accept another substrate molecule
describe the effect of temperature on enzyme activity
as temperature increases, enzyme reactions become faster, because the molecules have more energy. However, at high temperatures the atoms of the enzyme molecule vibrate more rapidly and break the weak bonds that hold the tertiary structure together. The shape of the active site changes and the substrate can no longer fit in. The enzyme is said to be denatured
describe the effect of pH on enzyme activity
acids and alkalis can denature enzymes. Hydrogen ions (H+) in acids and hydroxyl ions (OH-) in alkalis disrupt the weak bonds and change the shape of the active site
what is the name of the OH- alkali ion?
hydroxyl
what is the function of the cytoplasm of the cell?
it contains enzymes that speed up biochemical reactions
what does the vacuole contain?
cell sap, a weak solution of sugar and salts
how big are prokaryotic cells compared to eukaryotic cells?
prokaryotes like bacteria are roughly a tenth the size of eukaryotic cells
name 3 organelles that prokaryotic cells don’t have
- nucleus
- mitochondria
- chloroplasts
what is the largest magnification a light microscope can reach? what does this allow you to see?
1500x (this allows you to see individual animal and plant cells along with the organelles inside them)
which parts of a cell can you see with a light microscope?
- If the cells have been stained you can see the dark-coloured nucleus surrounded by lighter-coloured cytoplasm
- tiny mitochondria and the black line of the cell membrane are also visible
- in plant cells, the cell wall, chloroplasts and the vacuole can be seen
give a different name for a light microscope
an optical microscope
what is the part of the microscope you look down called?
the eyepiece
what are the names of the two different knobs on the microscope, and how are they different?
the larger knob (the coarse adjustment knob) is to bring the specimen roughly into focus. The smaller knob (usually lower down than the coarse adjustment knob) is called the fine adjustment knob and is to finely tune the focus.
what is the name of the area where you put your microscope slide?
the stage
what do the high and low power objective lenses do?
they magnify the specimen
how many times can electron microscopes magnify objects?
more than 500 000 times
what does an electron microscope allow you to see that you can’t see with a light microscope?
electron microscopes allow greater detail to be seen than a light microscope. For example, it allows you to see the detailed structures inside organelles such as mitochondria and chloroplasts
what is the image that’s recorded on an electron microscope called?
an electron micrograph
when was the detailed ultrastructure of cells revealed and how?
the detailed ultrastructure of cells was revealed in the 1950s when the electron microscope was invented
when can you see chromosomes with a light microscope, and why?
during cell division the chromosomes carrying the long DNA molecules coil up, becoming shorter and thicker and visible with a light microscope
what have electron micrographs shown us about the nucleus?
that there’s a double membrane around it
how many membranes are there around the nucleus?
two
which microscope do you need to study mitochondria?
mitochondria are about the size of bacteria, so they can be seen with a light microscope, but you need an electron microscope to see any of the detail
describe a mitochondrion’s membrane(s)
each mitochondrion has a smooth outer membrane and a folded inner membrane
what is the job of mitochondria? How do they carry out this job?
to capture energy in glucose in a form that the cell can use. To do this aerobic respiration takes place inside the mitochondria
what is the word equation for aerobic respiration?
glucose + oxygen -> carbon dioxide + water (+ energy)
what happens to the energy released by respiration?
the energy released by respiration ends up in molecules of ATP (adenosine triphosphate). ATP is used in the cell to provide the energy for muscle contraction, active transport and building large molecules from small ones, as well as many other processes
describe the cell wall of plant cells
- the plant cell wall is relatively rigid and provides support for the cell
- It mainly consists of bundles of long, straight cellulose molecules
- the cellulose molecules lay side by side to form microfibrils
what is a cell surface membrane?
the very thin structure around an individual cell
describe the structure of the cell-surface membrane
- electron micrographs show that the cell-surface membrane consists of a double layer of phospholipid molecules tightly packed together
- bigger protein molecules are embedded in the phospholipid molecules. Some proteins go all the way through the membrane and some only go half way
- membranes surrounding the organelles inside cells have the same structure
give another name for cell surface membranes
plasma membranes
why are cell surface membranes described as being partially permeable?
because the membrane only allows certain substances to pass through it
name the 4 methods by which substances pass through membranes
- diffusion
- osmosis
- facilitated diffusion
- active transport
give 3 molecules that are small enough to be able to diffuse through the very small gaps between the phospholipid molecules in the cell membrane
water, oxygen and carbon dioxide molecules
why can water, oxygen and carbon dioxide molecules diffuse into cells?
because they are small enough to pass through the very small gaps between the phospholipid molecules
what is the name for the concentration of water molecules during osmosis?
the water potential
what is osmosis?
the diffusion of water molecules across a partially permeable membrane from a region of higher water potential to a region of lower water potential
how does facilitated diffusion work?
- Glucose and many other water soluble molecules are too big to diffuse across the membrane by themselves. They must be helped across by carrier proteins
- each substance has its own specific carrier protein
- for example, a molecule of glucose fits into the outside end of a glucose carrier protein
- this causes the protein to change shape, allowing the glucose molecule to diffuse through the cytoplasm of the cell. The cell doesn’t need to provide any energy
how can mineral ions like sodium (Na+) and potassium (K+) cross the cell membrane?
mineral ions like sodium and potassium have electrical charges on them, so they also need help to cross the membrane. Specific channel proteins in the membrane allow them to diffuse through.
how does active transport work?
- when a cell needs to move substances across the membrane from a region of low concentration to a region of higher concentration, it must provide energy
- the substance fits into a specific carrier protein, then molecules of ATP provide the energy to change the shape of the protein
- as it changes shape the protein actively transports the substance across the membrane
- these special carrier proteins are sometimes called “pumps” because they’re moving substances against a concentration gradient
DNA is a double helix (a double-stranded spiral). What are each of the two DNA strands made up of?
small molecules called nucleotides
what does each nucleotide contain?
a part called a base
how many different bases does DNA have?
4
name DNA’s four bases
- Adenine
- Cytosine
- Guanine
- Thymine
what keeps the two DNA strands tightly wound together?
each base forms hydrogen bonds to a base on the other strand. This keeps the two DNA strands tightly wound together
which DNA bases always pair up with which?
Adenine (A) always joins up with thymine (T), and cytosine (C) always joins up with guanine (G)
what are the pairs of DNA bases called?
complementary bases
why do complementary bases join together?
because they complement each other in shape - this is called complementary base pairing
what does DNA control?
the production of proteins (protein synthesis) in a cell
how are proteins made?
by reading the code in DNA:
- proteins are made up of chains of amino acids. Each different protein has its own particular number and order of amino acids.
- this gives each protein a different shape, which means each protein can have a different function
- it’s the order of the bases in a gene that decides the order of amino acids in a protein
- each gene contains a different sequence of bases - which is what allows it to code for a unique protein
what is a section of DNA that codes for a particular protein called?
a gene
what is RNA needed for?
to make proteins
describe how RNA is used to make proteins
- DNA molecules (and so genes) are found in the nucleus of a cell, but they can’t move out of the nucleus because they’re very large.
- Protein synthesis happens in the cytoplasm at organelles called ribosomes
- so when a cell needs a particular protein, a copy of the gene that codes for it is made in the nucleus. This copy is smaller than DNA so it can move in to the cytoplasm, where it can be used to make the protein
- the copy of the gene is made from a molecule called messenger RNA (mRNA)
how is the RNA copy of the DNA gene made?
- the DNA in the gene acts as a template
- RNA, like DNA, is made up of nucleotides, which each have a base
- the bases on RNA nucleotides line up next to their complementary bases on the DNA template
- once the bases on the RNA nucleotides have paired up with the bases on the DNA strand, the RNA nucleotides join together to make an mRNA molecule
- eventually, a whole copy of the gene is made and the sequence (order) of bases in the mRNA copy is complementary to the sequence of bases in the DNA template
Which base does RNA not have? What does it have instead?
in RNA there’s no thymine (T), so the base uracil (U) binds to any adenine (A) in the DNA instead
how many bases code for 1 amino acid? what is this called?
three bases in a row code for 1 amino acid - this is called the genetic code
which amino acid does TAT code for?
tyrosine
which amino acid does AGT code for?
serine