Growth factors Flashcards

1
Q

What are growth factors?

A

signalling molecules that regulate cellular processes such as proliferation, differentiation, and maturation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What are cytokines?

A

growth factors of blood cells that are involved in hematopoiesis and immune cell differentiation. (can affect cells other than blood cells and can also induce apoptosis)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Where does EGF come from?

A

GPCR receiving a signal, goes onto a membrane protein, either ADAM or MMP, then there’s a protein with domain on exterior, signal that activates CPGR, activates ADAM/MMP, and causes cleavage of EGFR from membrane, so then can bind to receptor and activate MAPK cascade

Matrix metalloproteinases can mature / release EGF from membrane proteins

Example: ADAMs

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is Surface Plasmon Resonance?

A

Surface Plasmon Resonance (SPR) is a technique used to study drug binding and determine the rate at which ligands fall off. It involves using a gold film to excite surface plasmons, generating an evanescent electric field that interacts with a solution of prey molecules.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What are surface plasmons?

A

Surface plasmons are waves of electrons that occur on the surface of a metal, in this case, gold. When light is directed at the gold film at a specific resonance angle, it excites these surface plasmons which in turn generate an evanescent electric field that extends beyond the gold film.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

How is SPR used to study drug binding?

A

SPR involves coupling a receptor or bait molecule onto a flexible tether on top of the gold film. A solution of prey molecules is added to the system and allowed to associate with the bait molecule for a specified period of time. After this association period, the system is washed with a buffer solution to remove any unbound prey molecules and the rate at which the ligands fall off is measured during the dissociation period.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What does the MAP kinase cascade lead to?

A

leads to immediate early gene expression which produces Myc that controls cyclins and CDKs. this leads to a delated response gene expression that is importnat in cell cycle regulation. After the delayed response, G1-CDK can become active.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What does Wee1 do to the CDK?

A

deactivates it by phosphorylation on tyrosine 15

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

what does CAK do the CDK?

A

activates the CDK by phophroylation of the threoninine 161( needs CDC25 for this to happen however. wihtout it will remain inactive)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What does CDC25 do?

A

activates CDK by dephorpylation on tyrosine 15

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What does mitogen activation do?

A

triggers a signaling cascade known as the MAP cascade, leading to the activation of Myc, a transcription factor that promotes cell proliferation.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what are CDKs and how are they activated?

A

Cyclin-dependent kinases are enzymes that regulate the progression of the cell cycle. They are activated by cyclins, which bind to and activate the CDKs.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what is Rb phosprylation?

A

Retinoblastoma protein is a tumor suppressor protein that inhibits cell cycle progression. Rb phosphorylation inactivates Rb, allowing E2f, a transcription factor, to be activated.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what is E2f and what does it activation lead to?

A

Stimulates the transcription of genes that promote cell cycle progression. Auto-stimulation occurs when E2f activates the transcription of its own gene, leading to a positive feedback loop that further promotes cell cycle progression.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what cyclins are produced during s phase gene transcription?

A

E and A. proteins needed for cell division.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What occurs at DNA checkpoint control? what kinases and pathways are regulated here

A

Detects DNA damage during the cell cycle. ATM/ATR kinase is activated in response to DNA damage, which in turn activates the Chk1/Chk2 kinase pathway.

17
Q

what happens to P53 in response to DNA damage?

A

In response to DNA damage, p53 is phosphorylated and activated. Active p53 binds to the regulatory region of the p21 gene, leading to the expression of the p21 protein, a cyclin/CDK inhibitor that prevents further cell cycle progression.

18
Q

Chk1/Chk2 kinase pathway activation leads to the phosprylation of what?

A

phosphorylates p53.

19
Q

What gene is p53 attached to and then what occurs when phosprulated?

A

first attached to the Mdm2 protein and its phosprylation causes it to seperate, become active and attach to P21.

20
Q

what does P21 regulate?

A

regulates CDKs. it is an inhibitor of them. it is like a clamp that can stop cell cycle progression by clamping over the Cylcin/CDK kianse. acts as a negative feedback

21
Q

What are the experimental steps in SPR

A

Immobilisation: the ligand attached to the surface chip

Interaction analysis: the analyte is injected over the sensor surface and binds to the immobilized ligand (the association phase) and then the analyte is washed off the surface (the dissociation phase).

Regeneration: Any attached analyte or ligand is removed and restoration of the surface occurs.