Glycogen Flashcards

1
Q

how is gluconeogensis regulated

A

by allosteric and substrate-level control mechanism

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2
Q

How is glycogen synthesized?

A
  • Glucose units are activated for transfer by formation of sugar nucleotides
  • UDP=glucose synthesis is driven by pyrophosphate hydrolysis..
  • glycogen synthase catalyzes formation of alpha(1–>4) glycosidic bonds in glycogen.
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3
Q

How is Glycogen Metabolism controlled?

A
  • Glycogen metabolism is highly regulated
  • Glycogen synthase is regulated by covalent modification
  • Hormones regulate glycogen synthesis and degradation.
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4
Q

when would we want to store glucose ?

A
  • we have high concentration of glucose

- high levels of ATP(high energy states)

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5
Q

glycogen synthase

A

forms those alpha (1-4) glycosidic linkages

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6
Q

Glycogen phosphorylase is regulated by covalent modification…

A

phosphorylation converts the enzyme from a form that is allosterically regulated, to a form that is persistently active.

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7
Q

in the Phosphorylase (alpha) side

A

the equilibrium is shifted towards the R state so that the phosphoryaled enzyme is more active, with no requirement for an allosteric activator
That is, phosphorylation reduces the value of L ([T0]/[R0]) in the MWC mechanism

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8
Q

what is phosphorylase kinase regulated by?

A

phosphorylation

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9
Q

when is glucagon made?

A

in response to low blood sugar, and stimulates mobilization of glycogen

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10
Q

what does epinephrine do?

A

it prepares the organism for mobilization of large amounts of energy (‘fight or flight’)

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11
Q

why Cyclic AMP is a second messenger?

A

because it is the intracellular agent of an extracellular hormone. The enzyme that makes cAMP is membrane associated

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12
Q

why this cascade mechanism amplifies hormonal signal ?

A

because one hormone-receptor complex can activate many G proteins, and many cAMP molecules can be synthesized before the G protein dissociates

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13
Q

how does cAMP activates cAMP-dependent protein kinase?

A

cAMP binding causes dissociation of the C subunit, which is the active kinase, which phosphorylates phosphorylase kinase

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14
Q

Phosphocreatine

A

provides a short-term source of ATP in muscle, because it can phosphorylate ADP to make ATP

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15
Q

what’s the source of ATP during intense workout?

A

free ATP, phosphocreatine and anaerobic glycolysis

phosphocreatine prolongs ATP availability for a few more seconds

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16
Q

why can’t ATP persist for long periods of time during workout?

A

because ATP and phosphocreatine are quickly used up, and anaerobic glycolysis would cause acidosis

17
Q

where do ATP come from in long term excise ?

A

glycogen breakdown and aerobic metabolism become important

18
Q

Which type of ATP synthesis is slower?

A

synthesis by oxidative phosphorylation is slower than by anaerobic glycolysis, which in part explains the reduced speeds of runners running longer distances

19
Q

what’s another source of ATP during LONG marathons ?

A

fat breakdown also becomes an important energy source. ATP synthesis from fat degradation is even slower than from glycogen breakdown, so speeds are slower. Elite runners consume ~equal amounts of fat and glycogen during marathon

20
Q

what are the types of Glycogen storage diseases?

A

von Gierke’s disease
Cori disease
McArdle disease

21
Q

von Gierke’s disease

A

(glucose-6-phosphatase). Glycogen is normal in structure but present in excess. Glucose-6-phosphate accumulates in liver (cannot be converted to glucose), stimulates glycolysis causing lactate acidosis

22
Q

Cori disease

A

(debranching enzyme), only outermost branches of glycogen can be degraded. Symptoms similar to von Gierke

23
Q

McArdle disease

A

(muscle glycogen phosphorylase). Limited ability to perform strenuous exercise, but gentle exercise is possible

24
Q

what are other names for pentose phosphate pathway?

A

hexose monophosphate shunt or the phosphogluconate pathway

25
where is a major site of the pentose phosphate pathway?
Liver
26
what does the pentose phosphate pathway provide for fatty acids synthesis in liver?
NADPH
27
what's the mission of PPP
providing NADPH that the cell require in the form of electrons from glucose and carbon compounds for biosynthetic reactions
28
what is NADPH needed for ?
reductive anabolic pathways
29
how is NADP+ reduced to NADPH?
Glucose-6-phosphate dehydrogenase oxidizes glucose-6-phosphate to 6-phosphogluconate ---> NADP+ is reduced to NADPH
30
Gluconolactonase
unfolds 6P-D-gluconate from ring to linear form. (occurs spontaneously)
31
where was 6- phospho-gluconate dehydrogenase mentioned?
Oxidative decarboxylation of 6-phospho-gluconate yields ribulose-5- phosphate (a pentose phosphate)... which generates NADPH
32
what do the subsequent Non-oxidative reactions of PPP produce?
ribose-5-phosphate for nucleic acid and coenzyme (NADH, NADPH, FAD) biosynthesis, and return some carbon to glycolysis or gluconeogenesis
33
When both ribose-5-P and NADPH are required
The oxidative reactions of the pathway predominate, ribose-5-P and NADPH are used for biosynthesis, no carbon is returned to glycolysis
34
When more ribose-5-P than NADPH is required
Fructose-6-P and glyceraldehyde-3-P from glycolysis are fed into the non-oxidative branch of the pentose phosphate pathway, which can run in reverse to make ribose-5-P with no generation of NADPH. No carbon is returned to glycolysis
35
When more NADPH than ribose-5-P is required
6 glucose-6-P 6 ---> ribose-5-P + 12 NADPH + 6 CO2 by the pentose phosphate pathway 6 ribose-5-P ---> 4 fructose-6-P + 2 glyceraldehyde-3-P 4 fructose-6-P + 2 glyceraldehyde-3-P ---> 5 glucose-6-P by gluconeogenesis
36
Net reaction is complete oxidation of glucose with production of NADPH:
Glucose-6-P + 12 NADP+ 6 CO2 + 12 NADPH
37
When both NADPH and ATP are needed, but ribose-5-P is not
As in the previous case, except that the fructose-6-P and glyceraldehyde-3-P are fed into glycolysis to generate ATP