GI tract Flashcards
How is the stomach lining protected against autodigestion?
gastric lining is protected by:
- mucus secreted by surface epithelial and mucous neck cells
- bicarbonate secreted by epithelial cells under mucous layer
these processes are prostaglandin-dependent so using NSAIDs inhibits them and increases risk of gastritis and ulcers
what are the phases of regulation of gastric acid secretion and stomach emptying?
cephalic phase
gastric phase
intestinal phase
what stimulates the cephalic phase?
sight, smell, taste and thoughts of food activates the parasympathetic nervous system
what happens in the cephalic phase?
stimulus activates the submucosal plexus which causes the secretion of mucus from mucus cells, pepsinogen and HCl from parietal cells
Gherlin is also released from stomach when it is empty and acts on hypothalamus to stimulate appetite, gastric secretions and motility
16SrRNA sequencing
for identifying bacteria - new species
what stimulates the gastric phase?
process of food entering the stimulates stretch receptors in the stomach
what happens in the gastric phase?
stretch receptors activate the submucosal plexus, myenteric plexus and parasympathetic nervous system - vagus nerve
submucosal plexus = causes the release of mucus, pepsinogen, HCl and gastrin
myenteric plexus increases the contractions of stomach
presence of gastrin and vagus nerve causes release of histamine
what does histamine do?
stimulates the parietal cells to release more HCl
where is mucus produced?
mucous cells of stomach
where is pepsinogen produced?
chief cells of stomach
where is gastrin produced?
G cells of stomach
where is somatostatin produced?
D cells of stomach
where is HCl produced?
parietal cells of stomach
where is intrinsic factor produced?
parietal cells of stomach
what stimulates the intestinal phase?
process of chyme being in duodenum activating duodenal stretch receptors and chemoreceptors
what happens in the intestinal phase?
stretch receptors and chemoreceptors stimulate myenteric plexus and release of inhibitory hormones
myenteric plexus is inhibited by this process, reducing contraction and motility
small intestine releases secretin, somatostatin, leptin and CCK
secretin
released from S cells in response to low pH which stimulates pancreatic and bile secretions
somatostatin
released from D cells
inhibits chief cells, reducing the concentration of pepsinogen and inhibits parietal cells, reducing secretion of HCl
leptin
released by adipose tissue, acts on hypothalamus to suppress appetite and regulate adipose tissue mass
CCK
released from I cells which causes the gallbladder to contract to release bile from gallbladder and stimulates pancreatic secretions
stomach motility
- pacemaker cells initiate weak peristaltic waves that move towards antrum and last 15-20 seconds
- peristaltic wave reaches antrum and intensity of contraction increases, causing contents within antrum to become under higher pressure
wave continues towards the pylorus, digging deep into the food
wave continues to pylorus, which contracts preventing the majority of contents from entering duodenum so only a few ml of chyme enter duodenum with each mixing wave
forces contents of antrum back up to main body of stomach - retropulsion
retropulsion
important for mixing of stomach contents
takes around 1-3 hours to empty stomach
what factors inhibit the stomach emptying?
factors that inhibit stomach motility and secretions are caused by food entering duodenum:
- duodenal distension
- irritation of duodenal mucosa
- lipids, fatty acids, proteins and CHO
- acidity - pH>3.5-4
- increase in osmolarity
myenteric reflex - stretching of stomach promotes and increases pyloric pump and inhibits pylorus tone
CCK, GIP and secretin are released to inhibit
GIP
gastric inhibitory polypeptide
what mediates the vomiting centre?
histamine - H1 and serotonin 5-HT3
what are the vomiting trigger zones?
chemoreceptor trigger zone in medulla oblongata
cortex
labyrinth - vestibular nuclei
GI receptors to nucleus tractus solitarius to vomiting centre
chemoreceptor trigger zone in medulla oblongata
mediated by dopamine - D2 and histamine - H1
triggered by chemotherapy, opioids and anaesthetics
cortex
triggered by smell, sight and anxiety
Labyrinth
vestibular nuclei
mediated by ACh M1 and histamine H1
triggered by motion and anaesthetics
GI receptors
to nucleus tractus solitarius to vomiting centre
mediated by serotonin - 5-HT3
triggered by distension and toxins
how does emesis occur?
held inspiration/ breath held which increases abdominal pressure
glottis closes preventing aspiration
duodenum contracts, blocking transit of contents in the stomach
gastro-oesophageal sphincter relaxes
abdominal wall contracts abruptly
causing gastric contents to be ejected forcefully
what is the function of the small intestine?
continued digestion and absorption of nutrients
90% of nutrient absorption occurs here
most occurs in first 1/4 of small intestine - duodenum and jejunum
what are the sections of the small intestine?
3:
- duodenum
- jejunum
- ileum
what does the duodenum receive and from what?
receives secretions from the liver, gallbladder and pancreas
what breaks down sucrose?
sucrase-isomultase - brush border enzyme
what are the types of lipases?
lingual lipase
gastric lipase
pancreatic lipase
lipoprotein lipase
what does lipoprotein lipase do?
breaks down chylomicrons into free fatty acids in blood vessels and lymphatic vessels
Lipoproteins
involved in transport of lipids:
- chylomicrons
- very low density lipoproteins
- intermediate density lipoproteins
- low density lipoproteins
- high density lipoproteins
chylomicrons
transports dietary triglycerides to peripheral tissues
very low density lipoproteins
transports endogenous to peripheral tissues
low density lipoproteins
transports cholesterol to peripheral tissues and can cause atherosclerosis
high density lipoproteins
transports cholesterol from peripheral tissues to liver
what is the function of the pancreas?
involved with secreting substances for digestion
what exocrine substances does the pancreas secrete?
bicarbonate enzymes in response to secretin and CCK: - trypsin - chromotrypsin - carboxypeptidase lipase - amylase - ribonuclease
bicarbonate
released by ductular cells to provide optimum pH for enzyme activity
trypsin
released by acinar cells
activated by enteropeptidase
chromotrypsin
released by acinar cells
carboxypeptidase
breaks down proteins and released by acinar cells
what cells produce lipase, ribonuclease, deoxyribonuclease and amylase
acinar cells of pancreas
ribonuclease and deoxyribonuclease
break down nucleic acids
endocrine pancreas
secretes: insulin somatostatin glucagon pancreatic polypeptide ghrelin
insulin
beta cells
somatostatin
D cells
glucagon
Alpha cells
pancreatic polypeptide
F cells
what is bile made up of?
bile salts, lecithin - phospholipids, bicarbonate ions and cholesterol
how much bile is produced daily?
3-4g
what does the liver and gallbladder secrete?
bile
cholesterol
bile pigments - including metabolic end products
trace metals
what are the main functions of the liver?
carbohydrate, amino acid and lipid metabolism drug/ toxin metabolism synthesis of proteins - albumin and coagulation factors synthesis and secretion of bile storage of vitamins and minerals immune regulation glycogenolysis and glyconeogenesis involved in metabolism of LDL and HDL
role of liver in clotting cascade
makes clotting factors
vitamin K dependent factors - 10,9,7,2
bilirubin metabolism
RBCs broken down into free haemoglobin in kidneys
free heamoglobin is broken down at liver, kidneys and bone marrow into haem and globin
globin broken down into amino acids and recycled
haem is broken down into biliverdin and iron
iron is recycled
biliverdin converted to unconjugated bilirubin > conjugated bilirubin in liver
bilirubin secreted into bile and into duodenum via biliary tree
bilirubin reabsorbed from GI tract and enters enterohepatic circulation back to liver, it is filterd from kidneys into urobilin and some bilirubin remains in GI tract
forms sterocobilin - faeces
liver role in drug metabolism
principle site of drug metabolism:
•Drugs (orally taken) are absorbed in the gut and pass to the liver via the portal vein.
•The drugs undergo ‘first pass metabolism’ before entering the systemic circulation.
-Cytochrome P450 enzymes are abundant in the liver, they are involved in drug metabolism. Such reactions include oxidation, hydrolysis and hydroxylation.
role of liver in vitamins and minerals
stores vitamin B12, A, D in large amounts
stores vitamin K and folate in small amounts
stores minerals like iron and copper
parts of the large intestine
cecum ascending colon transverse colon haustra descending colon sigmoid colon rectum
functions of the large intestine
reabsorption of water and some nutrients
•Storage and compaction of faecal material prior to defacation
defecation reflex
the mass movement of faeces, which has been caused by the stretch of the rectum which causes the internal anal sphincter to relax and the rectum and sigmoid colon to contract. If the external anal sphincter is relaxed, defecation occurs.
what are the functions of the gut microbiome?
- Metabolise, digest, ferment CHOs and lipids which aid absorption.
- Synthesis vitamins such as vitamin B and vitamin K.
- Protect the gut from pathogens and are involved with developing the immune system.
main cause of stomach ulcers
helicobacter pylori
what is the microbiome?
all the microorganisms in an environment
what is the microbiota?
microorganisms themselves in a microbiome
what is species richness?
how many species
what is species eveness
measure of evenness
how can microbiome affect change of developing health conditions?
- C-section leads to increased asthma and obesity (diff microbes break down sugars, gut handling of sugar and appetite) (diff microbiome).
- Bacteria can affect immunity.
- Autism.
- Cancer.
- Bacterial vaginosis.
- Liver disease.
- MS.
- Depression/stress.
- Rheumatoid arthritis.
what factors affect the microbiome?
- Diet.
- Antibiotics.
- Animals.
- Human genetics.
- Sleep deprivation.
- Stress.
- Occupation.
- Local environment.
- Physical interaction.
what are the functions of the liver?
metabolism of drugs produces bile glycogen storage synthesis of clotting factors deamination of amino acids production of proteins, such as albumin storage of vitamins and minerals carbohydrate, amino acid and lipid metabolism
what makes up the liver?
liver lobules
liver lobules
make up liver segments
6 acinus make up one lobule
contain portal triad
what makes up the portal triad?
hepatic artery
hepatic portal vein
bile duct
how many acinus zones are there?
3 zones, relative to the portal tract and have different metabolic functions
what are the acinus
zone 1
zone 2
zone 3
acinus zone 1
closest to oxygenated blood supply, nutrients and toxins
these cells are more metabolically active
acinus zone 3
furthers from the portal tracts and closest to the central vein
deal with hypoxia and have lower concentration of nutrients and toxins
liver cells
hepatocytes, carry out the major functions of the liver
what are the different types of liver cells?
sinusoidal epithelial cells
kupffer cells
stellate cells
sinusoidal epithelial cells
line sinuses between hepatocytes
kupffer cells
macrophages
remove bacteria from blood
remove haemoglobin from the blood
stellate cells
store vitamin A
produce collagen and extracellular matrix
flow of bile through the liver
bile synthesised by hepatocytes
secreted into bile canaliculi
canaliculi merge and drain into bile ductile and then larger ducts
bile goes from right and left hepatic duct
enters common hepatic duct and joins with cystic duct to form the common bile duct which enters the duodenum
fatty acids as an alternative fuel
used by heart and skeletal muscle
converted by beta oxidation to acetyl coenzyme A and used by krebs cycle
ketone bodies
produced from fatty acids in liver
starvation
lack of fuel rather than a water/ electrolyte deprivation
responses to starvation
production of more glucose by glycogenolysis and gluconeogenesis
or other sources:
- lactate
- amino acids - ketone bodies which can then be used by the brain to maintain consciousness without glucose
glycerol and fatty acids
what hormones regulate starvation?
glucagon
cortisol
adrenaline
what are the main sources of glycogen?
fat
muscle
liver
body’s response to high glucose
insulin released from beta cells in islets of langerhands in pancreas
what does insulin do?
glycogenesis
lipogenesis
protein synthesis
anabolism
use of ketone bodies
used mostly by brain tissues as they can cross the BBB and then be converted back to acetyl coenzyme A and enter krebs cycle
what are the 4 quadrants of the abdomen?
right and left upper quadrants
right and left lower quadrants
what are the 9 sections of the abdomen?
right and left hypochondrium epigastric right and left flank/ lumbar umbilical right and left groin/ inguinal pubic
what does glucagon do?
released from alpha cells
causes glycogenolysis - only occurs fully in liver as muscles lack glucose-6-phosphatase
only occurs for 24 hours
what does adrenaline do?
lipolysis
what does cortisol do?
gluconeogenesis in liver using:
- lactate
- amino acids
- triglycerides
liver function tests
ALT - alanine aminotransferase AST - aspartame aminotransferase Alk P - alkaline phosphatase Gamma-GT - gamma glutamyltransferase albumin bilirubin
ALT liver function test
liver cell damage
could indicate cardiac or skeletal damage
AST liver function test
liver cell damage
could indicate cardiac or skeletal damage
AST>ALT
cirrhosis
Alk P
biliary tree blockage
may be due to bone disease or from placenta
Gamma-GT
biliary tree blockage, may be due to chronic drug exposure - alcohol or anticonvulsants
albumin
impaired synthetic function
may be decreased in malnutrition, sepsis or major trauma
bilirubin
disturbance of bilirubin handling
may be from myoglobin break down - muscle damage
grouping of liver function tests
liver injury - ALT, AST, Alk P and Gamma-GT
liver synthesis - albumin
liver excretion - bilirubin
cori cycle
lactate created by anaerobic respiration is transported from muscles to liver
converted to pyruvate
which is converted to glucose - requiring ATP
glucose can then be used by other tissues
lipolysis
triglycerides are broken down into fatty acids, used directly, broken down further to form ketone bodies
glycerol used in gluconeogenesis
chronic liver disease - blood tests
liver function tests
hepatitis B and C screen
fasting glucose, cholesterol and triglyceride
autoimmune liver screen
immunoglobulins
ferritin, transferrin saturation and iron studies
alpha 1 trypsin
TSH
anti-TTG - coeliac screen
caeruloplasma/ serum copper screen in young
autoimmune liver screen
ANA
SMA
LKMA
AMA
immunoglobulins in chronic liver disease testing
IgG
IgM
IgA
chronic liver disease imaging
liver ultrasound
liver CT triple phase
fibroscan
liver ultrasound
texture
focal lesions, assess portal vein for thrombus
flow rate - portal hypertensions
splenomegaly
liver CT triple phase
looks for liver masses
fibroscan
measures stiffness of liver
diagnosis of chronic liver disease
blood tests
imaging
liver biopsy
liver biopsy
used to determine cause of cirrhosis/ degree of liver damage if uncertain
conducted by percutaneous methods or transjugular methods
how to manage chronic liver disease acutely
treat cause of decompensation - alcohol, infection or bleed
ascitic tap if ascites present to rule out spontaneous bacterial peritonitis
diuretics
ascitic drain
check INR - vitamin K >1.4
UGI endoscopy if bleeding/ varices
give banding/ beta blockers
lactulose / enemas to prevent encephalopathy
if acute kidney injury give terlipressin
terlipressin
human albumin solution
long term management of chronic liver disease
- treat underlying cause of liver disease and liver biopsy if unsure
- alcohol cessation
- lactulose and rifaximin to excrete ammonia
- nutrition
- diuretics
- beta blockers if varices
- liver transplant
- prophylaxis for spontaneous bacterial peritonitis
causes of jaundice
pre-hepatic haemolysis
hepatic
post-hepatic
pre-hepatic haemolysis
when RBCs are broken down in kidney
hepatic
hepatocytes impairment when the liver cannot convert unconjugated bilirubin into conjugated bilirubin
post-hepatic
biliary stasis - when the bilirubin cannot get into GI tract via biliary tree and goes into blood instead
causes of liver disease
alcohol
obesity
hepatitis B and C
risk factors of liver disease
alcohol
blood transfusions - hepatitis
high BMI
signs and symptoms of liver disease
Ascites - fluid in the abdomen and increased oedema.
•Anaemia.
•Haemotemesis.
•Itchy.
•Confusion.
•Chest - gynaecomastia and spider naevae.
•Hands - palmar erythema, leukonychia (white nails) and clubbing.
•Abdomen - hepatomegaly. Splenomegaly and caput medusae (bobbly looking swollen veins).
•Legs - oedema.
•Eyes/skin - jaundiced, loss of hair and bruising.
HELLP syndrome
severe variant of advanced pre-eclampsia with 3 features
3 features of HELLP syndrome
haemolysis
elevated liver enzymes
low platelet count
signs and symptoms of HELLP syndrome
Raised blood pressure. •Oedema. •Proteinuria. •Headache. •Epigastric pain. •Poor fetal growth. •Massively raised AST and ALT. •Raised mixed bilirubin. •Lowered haemoglobin. •Lowered platelets. •Raised creatinine.
treatment for HELLP syndrome
- Magnesium to prevent maternal seizures.
* Blood or platelet transfusion depending on severity.
mortality in HELLP syndrome
high
up to 30% for mother
up to 60% for baby
hereditary spherocytosis with haemolysis
t is an inherited condition (autosomal dominant) where red cell wall proteins are abnormal, resulting in an inability to adjust their shape to pass through capillaries.
signs and symptoms of hereditary spherocytosis with haemolysis
- LUQ pain (spleen).
- Mild anaemia.
- Jaundice.
- Splenomegaly (Use to fragile red cells being destroyed by the spleen).
- Raised unconjugated bilirubin.
- Lowered haemoglobin.
- Raised reticulocytes
treatment for hereditary spherocytosis
transfusion
splenectomy
alcohol cirrhosis with GI bleed cause
excessive alcohol consumption
signs and symptoms of alcohol cirrhosis with GI bleed
- History of vomiting blood.
- Increased heart rate.
- Decreased blood pressure.
- Ascites.
- Massively raised Gamma-GT.
- AST > ALT.
- Decreased haemoglobin
- Raised INR.
management of alcohol cirrhosis with GI bleed
Fluid resuscitation so give fluids.
•Then correct coagulopathy and endoscopy to try to band or sclerose any Varices.
•Restrict sodium and give diuretics to manage ascites.
•If drastic, abdominal paracentesis may be required, portal vein decompression or liver transplant.
•Abstinence from alcohol is essential.
What are the signs and symptoms of a carcinoma of the head of the pancreas?
Patient age. •Weight loss. •Abdominal pain. •Palpable gallbladder. •Deep jaundice. •Dark urine due to bilirubin being majorly conjugated so urine is dark. •Light faeces as pigments do not reach the intestine. •Raised ALT •Raised Gamma-GT. •Raised conjugated bilirubin. •Raised INR. •Dilated biliary system.
Anatomy of
who is chronic hep C common in?
homeless and poor people
what are the signs and symptoms of chronic hep C?
AST > ALT.
•Raised gamma-GT.
•Anti-HCV positive.
-Can lead to cirrhosis (20-30%) or hepatocellular carcinoma (up to 4%).
causes of chronic hep C
blood to blood contact
usually from needle sharing
what is the management of chronic hep C?
antivirals
abstinence from alcohol
what is gilbert’s syndrome?
It is an inherited (autosomal recessive) condition where UDP-glucuronosyltransferase is defective (Involved in the glucuronidation pathway).
what are the signs and symptoms of gilbert’s syndrome?
few and may be unnoticed for years
- mild jaundice
- exacerbated by illness, fasting or extreme exercise
- raised unconjugated bilirubin
- enzymes normal