GET IN YOUR BRAIN Flashcards
Increased Leucine on PAA
MSUD
Defects in biotin metabolism cause
biotinidase deficiency and propionic acidemia
Primary lactic acidosis
Electron Transport Chain (ETC) - mito defects.
Pyruvate dehydrogenase deficiency
Hiccuping and apnea
Nonketotic hyperglycinemia
Hyperammonemia
Urea cycle disorders
Severe acidosis
Organic acidemias
Lethargy and seizures
MSUD
Jaundice, hypoglycemia, liver failure, hepatomegaly, vomiting
Galactosemia
Hypoglycemia, weakness, cardiac
FAOD
Hypoglycemia and circulatory collapse
CAH
Respiratory alkalosis (Tacypnea), vomiting and lethargy, NOT ACIDOTIC
Urea cycle disorders
Elevated C3 acylcarnitine measured in NBS
Propionic acidemia and methylmalonic acidemia
Elevated C5 acylcarnitine measured on NBS
Isovaleric acidemia
Liver failure, E. coli sepsis
Galactosemia
Dysostosis Multiplex
LSD’s - typically MPS
Erlenmeyer flask defomity
Gaucher
Sphingomyelinase deficiency
Types A and B of Niemann Pick
Cholesterol trafficking defect
Type C of Niemann Pick
Palsy of upward gaze
Type C of Niemann Pick
Spinal “gibbus” - kink in spine
MPS
Earliest onset and most severe MPS
MPS I - Hurler Scheie
No corneal clouding and X-linked MPS
Hunter
More neurologic symptoms (frequently have behavioral problems with progression to severe neurologic disease) - mildest somatic symptoms of the MPS
MPS III - Sanfilippo
Most severe skeletal disease, normal intelligence (MPS)
MPS IV - Morquio
Usually normal intelligence, Arylsulfatase B deficiency (MPS)
MPS VI - Maroteaux-Lamy
Most severe cases characterized by hydrops fetalis (MPS)
MPS VII - Sly
Glycogen debrancher deficiency; progressive hypertrophic cardiomyopathy
GSD III: Forbes, Cori disease
Phosphorylase kinase deficiency (GSD IX) inheritance
X-LINKED
Hepatosplenomegaly, FTT, progressive cirrhosis, liver failure, myopathy/cardiomyopathy
Anderson disease (GSD IV): different phenotype from other hepatic glycogenoses
Hepatomegaly, hypoglycemia, lactic acidemia, hyperlipidemia, hyperuricemia, poor growth, +/- myopathy
Clinical presentation of Hepatic GSD
Vitamin B6 therapy
Homocystinuria
Vitamin B12 therapy
Methylmalonic aciduria
Thiamin therapy
MSUD
Tetrahydrobiopterin therapy
PKU and tetrahydrobiopterin deficiency (also provide DOPA for this one - not for PKU)
Fragile X inheritance
FMR1 - X-Linked Dominant
CGG repeats in 5’ untranslated region
200+ repeats = disorder (at this number FMR1 gene becomes methylated and fails to produce Fragile X MR protein [FMRP])
Normal number of repeats in FMR1
<45 = unaffected, make all the protein needed
Chance that a premutation 69 or lower would expand to a full mutation
<6%
Chance that a premutation 100 or higher would expand to a full mutation
94-100%
Lack of CFTR leads to
abnormal epithelial ion and fluid transport
Class I CFTR mutation
Null production - frame shifts, premature term (G542X, R553X, W1282X) [Worst]
Class II CFTR mutations
Trafficking - missense deltaF508, N1303K
Class III CFTR mutations
Regulation - Missense G551D
Class IV CFTR mutations
Conduction - Conservative Missense R117H [Best]
Chronic respiratory infections, exocrine pancreatic insufficiency, Intestinal obstruction/meconium ileus, male sterility, diabetes, progressive obstructive liver disease
Cystic fibrosis
Class I, II, and III mutations vs. Class IV and V mutations
Class I, II, and III mutations have essentially absent CFTR function and are associated with a more severe phenotype with pancreatic insufficiency
Class IV and V mutations retain partial CFTR function and are associated with a more mild phenotype with pancreatic sufficiency
CBAVD (Congenital bilateral absence of the vas deferens)
Otherwise healthy male presents for evaluation of infertility
Normally have normal lung function, BMI, negative sweat test
Male with CBAVD should be screened for CFTR mutations, especially uncommon mutations
Mannose binding lectin and TGFB
modifiers of pulmonary disease in CF
Increased incidence of CFTR mutations in general population with
- Asthma
- Chronic Rhinosinusitis
- Idiopathic pancreatitis
- Primary sclerosing cholangitis
Basic tenets of taking care of a patient with CF
- CF is a nutritional disease (before enzymes, most kids with CF died of malnutrition)
- CF is a disease of airway clearance
- CF is a disease of epithelial ion transplant (too much salt in sweat, respiratory glandular obstruction, intestinal obstruction, biliary cholestasis, exocrine pancreatic insufficiency)
- CF is a disease of inflammation
- CF-related diabetes
Neonatal hypoparathyroidism and immunodeficiency
22q
Immunodeficiency, CHD, palate defects, hypocalcemia, GU anomalies, GI problems, DD, psychiatric illness
22q
Conotruncal heart defects
22q (TOF, VSD, IAA typeB)
In frame deletions of FBN1 usually have a _
more severe phenotype
Brushfield spots
T21
hypertonia, prenatal growth deficiency, fists clenched, rocker-bottom feet, severe heart malformations, feeding difficulties
T18
Microcephaly, sloping forhead, fist clenching, rocker-bottom feet, severe CNS malformations, CHD
T13
Repeat expansion in Huntington
CAG in HTT; Coding region in exon 1
26 or less is normal
27-35 is intermediate
36-39 repeats is reduced penetrance
40+ is full mutation
Anticipation seen in HD
more commonly when paternally inherited
Agents to avoid in HD
L-dopa-containing compounds, alcohol consumption, and smoking
Sickle cell disease = homozygous
HbSS
Anterior horn cells
SMA - loss of anterior horn cells in the spinal cord
SMN1 deletions
cause SMA (usually deletion of exon 7)
SMN2 determines
prognosis (dosage: # copies 0-5; 3+ = milder)
Why should you avoid prolonged fasting in SMA
unexplained metabolic acidosis is a potential complication of SMA
Why is the lifespan shortened in SMA
progressive ventilatory insufficiency resulting from chest muscle involvment
UBA1
gene associated with X-linked SMA
Female heterozygote carriers for DMD at an increased risk for
DCM
In frame deletions of DMD
Becker
Out of frame deletions of DMD
Duchenne
Testing used for immunohistochemistry of dystrophin
Western blot
DMD associated DCM is characterized by
left ventricular dilation and congestive heart failure
_ complications are common causes of death in DMD and BMD
Respiratory and cardiomyopathy complications
Myxomas
Carney Complex
Psammamatous, melanotic schwannomas, thyroid cancer, skin tags, lipomas, blue nevi, cafe au lait spots, thyroid nodules, cardiomyopathy, primary pigmented nodular adrenocortical disease, spotty skin pigmentation
Carney Complex
Used when only first degree female relatives had breast cancer
Gail
Used when first and second degree relatives had breast cancer
Claus
Takes into account current age, age at first menses, and age a first live birth
Gail
Considers previous biopsy and if atypical cells were seen
Gail
For breast cancer risk AND mutation risk
BRCAPro, Tyrer-Cuzick, BOADICEA
Considers risk for “lower penetrance” gene in addition to BRCA
Tyrer-Cuzick
FAP plus osteomas and soft tissue tumors (desmoids, epidermoids, fibromas)
Gardner syndrome
FAP plus CNS tumors, specifically medulloblastoma
Turcot syndrome
Cancers that Amsterdam II takes into consideration
CRC, uterine, small bowel, ureter, renal pelvis
Absence of MLH1 and PMS2 could be
MLH1 germline mutation
MLH1 promoter hypermethylation (rule out through BRAF testing)
Absence of just PMS2 could be
MLH1 or PMS2 germline mutations
Most Lynch CRC tumors are _ on microsatellite testing
MSI-high (high instability)
Absence of MSH2 and MSH6 could be
MSH2 germline mutation
EPCAM germline mutation (EPCAM is just upstream of MSH2, 3’ EPCAM deletions can lead to absence of MSH2 expression)
Absence of just MSH6 could be
MSH6 germline mutation
Adrenocortical carcinoma
Li-Fraumeni
Choroid plexus carcinoma
Li-Fraumeni
Cancer syndrome may manifest as primary hyperparathyroidism
MEN1
MEN2A and 2B associated with _ mutations
gain of function
RET associated Hirschsprung’s disease
Associated with LOF mutations
Megacolon
Constipation
Bilateral vestibular schwannomas
NF2
Conductive HL by age 30
Tinnitus
Balance dysfunction “death by drowning” is key pedigree note
Decreased visual acuity
Cardiac rhabdomyoma
Tuberous Sclerosis Complex (TSC)
Angiofibromas, cortical dysplasias, hypomelanotic macules, lymphangioleiomyomatosis, multiple retinal nodular hamartomas, renal angiomyolipoma, subependymal giant cell astrocytoma, subependymal nodules, ungual fibromas, neuroendocrine tumors
Tuberous Sclerosis Complex
Shagreen Patches
Tuberous Sclerosis Complex
Neuroendocrine tumors seen in TSC
Pituitary adenoma, parathyroid adenoma, pancreatic adenoma, gastrinoma, pheochromocytoma, carcinoids
Penile freckline
PTEN
Subependymal nodules
Tuberous Sclerosis Complex
Subependymal giant cell astrocytoma (brain tumor)
Tuberous Sclerosis Complex
“confetti” hypopigmented skin lesinos, dental pits, intraoral fibromas, multiple renal cysts, retinal achromic patch
Tuberous Sclerosis Complex
Cancer syndrome with seizures, ASD, ADHD, DD/ID
Tuberous Sclerosis Complex
Endolymphatic sac tumors
VHL
Clear cell renal carcinoma, spinal or cerebellar hemangioblastoma, pancreatic neuroendocrine tumors, pheochromocytoma, paraganglioma, retinal angioma, multiple renal and pancreatic cysts
VHL
Spinal or cerebellar hemangioblastoma
VHL
Coved type ST segment
Brugada
SCN5A is the main gene in
Brugada
Sudden death, negative T wave, Coved type ST segment, V fib, self-terminating polymorphic ventricular tachycardia, episodes of syncope, nocturnal agonal respiration (gasping)
Brugada
Type of arrhythmia associated wtih normal baseline/resting ECG and abnormal ECG only after andrenergic event. Suden death or syncope with exercise/excitement, major cause of sudden death in childhoos
Catecholaminergic Polymorphic entricular Tachycardia (CPVT)
Migraines with aura, strokes, mood disturbances, progression to subcortical dementia, pseudobulbar palsy, leukoencephalopathy
CADASIL (Cerebral Autosomal Dominant Arteriopathy with Subcortical Infarcts and Leukoencephalopathy)
Gene: NOTCH3
Xanthomas, elevated cholesterol, premature atherosclerosis, coronary artery disease, increased risk for MI
Familial Hypercholesterolemia
Genes: LDLR, APOB, PCSK9, LDLRAP1
Telangiectasias, nose bleeds, AVMs (occur in large organs)
HHT
Genes: ACVRL (ALK1), ENG, SMAD4, GDF2
Torsades de pointes
Long QT
LQTS with congenital deafness
Jervell and Lange-Nielsen Syndrome (Autosomal Recessive)
Genes: KCNE1 and KCNQ1
LQTS with autism
Timothy syndrome
Timothy syndrome
- Autosomal dominant
- LQTS, type 8
- syndactyly
- autism
- structural cardiac malformations
- ID
- dental anomalies
Thickening, usually of the left ventricle which leads to reduced cardiac output
Hypertrophic Cardiomyopathy (HCM)
Caused by mutations in sarcomere genes
HCM
HCM is seen in
Noonan syndrome and Fabry
Stretching of muscle fibers, often in the left ventricle, leads to dilation of the chamber and reduced cardiac output
Dilated Cardiomyopathy (DCM)
Caused by mutations in cytoskeletal genes
DCM
DCM is seen in
DMD, mito disease, Bardet-Biedl Syndrome, Alstrom sydnrome
Caused by fibrofatty replacement of the right ventricular heart tissue (myocardium)
Arrhythmogenic right-ventricular Dysplasia/Cardiomyopathy (ARVD/ARVC)
Associated arrhythmia generated from the right ventricle
ARVD/ARVC
Naxos/Carvajal disease
Recessive ARVD/ARVC with palmoplantar keratoderma and “wooly hair”
Caused by mutations in desmosomal genes
ARVD/ARVC
During embryogenesis, the heart is made up of spongy layers of blood vessels, which should normally compact. Failure to compact leads to
Left-Ventricular Non-compaction (LVNC)
Excessive, prominent, persistent trabeculations are major feature (congenital but typically manifests later in life)
LVNC
Heart walls become rigid, reducing ability to pump blood/cardiac output
LVNC
Most cardiac arrhythmias are
Channelopathies
NBS for CF uses
Immunoreactive trypsinogen (IRT) - will be elevated in CF, then check common mutations
CF and Brugada are
Channelopathies
Chromosomal Breakage Disorders
Ataxia-Telangiectasia
Bloom
Cockayne
Fanconi Anemia
Nijmegen Breakage syndrome
Werner Syndrome
Xeroderma Pigmentosum
Dysarthria (slurred speech)
Ataxia-Telangiectasia
Ataxia, oculomotor apraxia, involuntary movements, recurrent infections, delayed puberty, premature menopause, growth delay, drooling, dysarthria, premature aging, type 2 diabetes at young age, increased risk for lymphomas and leukemias
Ataxia-Telangiectasia
Extreme growth deficiency and characteristic high-pitched voice
Bloom syndrome
IUGR, short stature, feeding dificulties, immune deficiency, premature menopause, azoospermia/oligospermia, learning problems (most intellectually normal), butterfly shaped skin lesion/rashes after sun exposure
Bloom syndrome
Biggest cancer risk for bloom syndrome
Colon followed by breast, liver, respiratory tract, lymphatic, sarcoma, germ cell, CNS, retinoblastoma
Postnatal growth failure, progressive microcephaly, leukodystrophy, neurologic dysfunction, DD, behavior problems, Intellectual deterioration, photosensitivity, Demyelinating peripheral neuropathy, pigmentary retinopathy, cataracts, SNHL, dental anomalies, premature aging
Cockayne Syndrome
Cachectic dwarfism
Cockayne syndrome
Worst type of Cockayne Syndrome
Type 2
Chromosome breakage syndrome not predisposed to cancer or infection
Cockayne Syndrome