Genomes Flashcards
What year was the Human Genome Project completed?
2003
What was the budget of the Human Genome Project?
$300 million
What were the three criteria of the HGP?
Accurate
Affordable
Accessible
What were the goals of the HGP?
Sequence human genome
Identify genes and their functions
Investigate association between genes and disease
How many genes are in the human genome?
~21,000
How much of the human genome consists of protein-coding sequences?
~1.6%
What are LINEs?
Long interspersed elements
~6000bp; 850,000 repeats
What are SINEs?
Short interspersed elements
~500bp; 500,000 repeats
What are LINEs and SINEs derived from?
Retrovirus genomes
What are mobile genetic elements?
Non-coding sequences derived from retrovirus genomes which can move around by transcription and reverse transcription
What is bioinformatics?
Use of computers to analyse and organise genome data
What characteristic sites can computers ‘spot’?
TATA box/promoters
Transcription regulatory elements
Translation initiation sites
Polyadenylation sites
5’/3’ splice sites
What is the transcriptome?
Set of all RNAs expressed in a cell/tissue type
What is the proteome?
Set of all proteins expressed in a cell/tissue type
How common are single nucleotide polymorphisms in humans?
~ every 1000bp