Genetics, Evolution, Development and Plasticity Flashcards
• Does human behavior depend on genetics, environmental influences, or both?
- The Nature-Nuture Issue
- A review of genetics provides a springboard for evaluating this controversial question
- Conclusion: BOTH genes and environment affect us, question really is to what degree they do so separately (e.g. sexual orientation and intelligence, is it nature or nurture, and how much?).
Genetic Contribution to Facial Expression
Consider facial expressions. A contribution
of the environment is obvious: You smile more when the world
is treating you well and frown when things are going badly.
Does heredity influence your facial expressions? Researchers
examined facial expressions of people who were born blind
and therefore could not have learned to imitate facial expressions.
The facial expressions of the people born blind were
remarkably similar to those of their sighted relatives
Mendelian Genetics
- Mendel demonstrated that inheritance occurs through discrete units of heredity, called genes (19th century munk Mendel)
- Prior to mendel, thought that inheritance was blending process of egg and sperm (blending process), like mixing paint.
- Mendel demonstrated that inheritance occurs through genes, and Genes come in pairs, called alleles (one from each parent, e.g. one for blue and one for brown eyes from mom and dad, and are aligned along chromosomes (46, form 23 pairs)
DNA, RNA, Proteins
Classically, a gene has been defined as part of a chromosome composed of the double-stranded molecule deoxyribonucleic acid (DNA). However, many genes do not have the discrete locations we once imagined (Bird, 2007). Sometimes several genes overlap on a stretch of chromosome.
Sometimes a genetic outcome depends on parts of two or more chromosomes.
- Often, part of a chromosome alters the expression of another part without coding for any protein of its own.
• A gene is defined as a portion of a chromosome and is composed of deoxyribonucleic acid (DNA)
• DNA serves as a model for the synthesis of ribonucleic acid (RNA)
• RNA is a single strand chemical that can serve as a template/model for the synthesis of proteins (messenger RNA)
DNA contains four “bases”—adenine, guanine, cytosine, and
thymine. The order of those bases determines the order of corresponding
bases along an RNA molecule—adenine, guanine,
cytosine, and uracil. The order of bases along an RNA molecule
in turn determines the order of amino acids that compose
a protein. For example, if three RNA bases are in the order cytosine,
adenine, and guanine, then the protein adds the amino
acid glutamine. If the next three RNA bases are uracil, guanine,
and guanine, the next amino acid on the protein is tryptophan.
- Any protein consists of some combination of 20 amino acids.
- Proteins determine the development of the body by:
- Forming part of the structure of the body
- Serving as enzymes, biological catalysts that regulate chemical reactions in the body
Not all RNA molecules code for proteins. Many RNA molecules perform regulatory functions
• Homozygous gene
- identical pair of genes on the two chromosomes
• Heterozygous gene
unmatched pair of genes on the two chromosomes (e.g. one for blue eyes, and one for brown)
• Genes are either dominant, recessive, or intermediate
- A dominant gene shows a strong effect in either the homozygous or heterozygous condition
- A recessive gene shows its effect only in the homozygous condition
- The gene for high sensitivity to the taste of phenylthiocarbamide (PTC) is dominant, and the gene for low sensitivity is recessive.
- An intermediate gene occurs in a phenotype where there is incomplete dominance in the heterozygous condition
• Autosomal genes:
all other genes except for sex-linked genes. The autosomal genes are found on autosomal chromosomes (which are all chromosomes except the sex chromosomes)
• Sex-linked genes
genes located on the sex chromosomes
• In mammals, the sex chromosomes are designated X & Y
• Females have two X chromosomes (XX)
• Males have an X and a Y chromosome (XY) (contributes either with an X or a Y determines sex of child)
When biologists speak of sex-linked genes, they usually
mean X-linked genes. The Y chromosome is small, with relatively
few genes of its own, but it also has sites that influence the functioning of genes on other chromosomes.
One sex-linked gene (recessive version) controls red-green color vision deficiency – found on X chromosome – if man has gene = he has deficiency (since he only has one X chromosome) = why more males than females have the deficiency (men have 0.08 probability, but women have 0.08*0.08 probability = very low).
different from sex LIMITED genes (mainly active in one sex, but present in both)
sex-limited genes
present in both sexes but active mainly in one sex. Examples
include the genes that control the amount of chest hair in
men, breast size in women, amount of crowing in roosters,
and rate of egg production in hens. Both sexes have the genes,
but sex hormones activate them in one sex and not the other,
or one sex much more than the other. Many sex-limited genes
show their effects at puberty
Genetic Changes
- Genes change in several ways:
- Mutation: a heritable change in a DNA molecule
- Microduplication/microdeletion: (During the process of reproduction) part of a chromosome that might appear once might appear twice or not at all
- Researchers think schizophrenia might be due to microduplication/microdeletion in brain-relevant genes.
Mutation
a heritable change in a DNA molecule
Changing just one base in
DNA to any of the other three types means that the mutant
gene will code for a protein with a different amino acid at one
location in the molecule. Given that evolution has already
had eons to select the best makeup of each gene, a mutation
is rarely advantageous. Still, those rare exceptions are important.
The human FOXP2 gene differs from the chimpanzee
version of that gene in just two bases, but those two mutations
modified the human brain and vocal apparatus in several ways
that facilitate language development
Microduplication/microdeletion:
(During the process of reproduction) part of a chromosome that might appear once might appear twice or not at all
• Researchers think schizophrenia might be due to microduplication/microdeletion in brain-relevant genes.
When this process happens to just a tiny portion
of a chromosome, we call it a microduplication or microdeletion.
Although it is possible for a microduplication to be helpful,
most are not. Microduplications and microdeletions of
brain-relevant genes are responsible for several psychological
or neurological disorders, probably including some cases of
schizophrenia.
Epigenetics
Changes in gene expression can occur without changes in our DNA – what you do any moment affect you now, but also produces epigenetic effects that affect your gene expression for a longer period of time.
A gene may be active in one person and not another. After all, monozygotic (“identical”) twins sometimes differ in handedness, mental health, or other aspects.
Examples:
- Mice not used to fat food higher probability of heart disease if exposed to fatty food later.
- Fear of odor in parent mice higher sensitivity to odor in offspring.
- Father mice stress offspring weakened hormonal response to stresses and altered gene expression in part of the brain.
Epigenetic mechanisms:
e.g. most widely studied: DNA methylation + histone remodelling
chromosomes are found in nucleus – we need to unravel chromosome into chromatim fibers. – chromtin is made up of DNA, which is wrapped around histones (which are proteins).
DNA methylation is the action that occurs when a methyl molecule attaches to a DNA strand. (usually at adenine nucleotide bases I think) – DNA methylation tends to decrease the expressions of adjacent genes on the DNA
Histone remodelling occurs at level of histones. = it is the action that occurs when histones change their shape, and in doing so, changes the shape of adjacent DNA. – histone remodelling can decrease or increase gene expression. (when histone “loosens” = more gene expression)
DNA methylation
is the action that occurs when a methyl molecule attaches to a DNA strand. (usually at adenine nucleotide bases I think) – DNA methylation tends to decrease the expressions of adjacent genes on the DNA
Histone remodelling
Histone remodelling occurs at level of histones. = it is the action that occurs when histones change their shape, and in doing so, changes the shape of adjacent DNA. – histone remodelling can decrease or increase gene expression. (when histone “loosens” = more gene expression)
An acetyl group loosens histone’s grip and increases gene activation
Heretability
• Refers to how much characteristics depend on genetic differences (between 0 (no contribution of genes) to 1 (all contribution of genes))
• Researchers have found evidence for heritability in almost every behavior they have tested
• Almost all behaviors have both a genetic and an environmental component
• Study monozygotic and dizygotic twins
• Study adopted children and their resemblance to their biological parents and adoptive parents (genes vs environment influence) – but beware, biological mother’s prenatal environment can also be of influence, which is still environment, not genetic.
• examine “virtual twins”—children of the same age, adopted at the same time into a single family. They grow up in the same environment from infancy, but without any genetic similarity. Any similarities in behavior imply environmental influences.
• In twin and adoption studies researchers have found evidence for some amount of heritability in basically any characteristic besides religion.
Any estimate of heritability applies only to a particular population at a particular time. (e.g. alcohol abuse may have high heritability in US, but in country with strict norms/prohibited alcohol consumption, heritability might not be expressed much)
Candidate gene approach:
researchers test a hypothesis, such as “a gene that increases the activity of the serotonin transporter may be linked to an increased risk of depression.”
genome wide association study:
examines all the genes while comparing two
groups, such as people with and without schizophrenia. The
problem with that approach is that it tests thousands of hypotheses
at once (one for each gene) and therefore has a risk
of seeing an apparent effect by accident – especially problematic in small samples, but also ethnic groups (some ethnic groups might have higher prevalence of a behavior, and also a gene, possible tagging that gene as a risk factor, without it actually being so)
genome wide association study:
examines all the genes while comparing two
groups, such as people with and without schizophrenia. The
problem with that approach is that it tests thousands of hypotheses
at once (one for each gene) and therefore has a risk
of seeing an apparent effect by accident – especially problematic in small samples, but also ethnic groups (some ethnic groups might have higher prevalence of a behavior, and also a gene, possible tagging that gene as a risk factor, without it actually being so)
Environmental Modification
- Traits with a strong hereditary influence can be modified by environmental intervention
- e.g., PKU: a genetic inability to metabolize the amino acid phenylalanine
- Environmental interventions can modify PKU by diet (and diet alone) important to show, even if there are hereditary influences, it can be modified through environment.
How Genes Affect Behavior
- Genes do not directly produce behaviors
- They produce proteins that increase the probability that a behavior will develop under certain circumstances
- Genes can also have an indirect affect, e.g. altering your environment, by producing behaviors that alter how people in your environment react to you. (e.g. making you attractive = more people contact you your genes affected you, by affecting your environment)
The evolution of behavior
Evolution is a change over generations in the frequencies of various genes in a population.
We distinguish between two questions: How did some species evolve, and how do species evolve?
Did = from what to what
Do = the process
• Principles: offspring resemble parents,
• Mutations, recombinations, and microduplications of genes introduce new heritable variations
• Certain individuals reproduce more than others do, thus passing on their genes to the next generation. Any gene that is associated with greater reproductive success will become more prevalent in later generations
Breeders choose individuals with a desired trait and make
them the parents of the next generation through a process
called artificial selection. Over many generations, breeders
have produced exceptional e.g. racehorses.
Darwin original idea: nature selects individuals/genes that are more successful (e.g. good at finding food)
Common Misunderstandings about Evolution
Does the use or disuse of some structure or behavior cause an evolutionary increase or decrease in that feature?
• Lamarckian evolution: According to this idea, if you exercise your arm muscles, your children will be born with bigger arm muscles no evidence for this!
Have humans stopped evolving?
• Because modern medicine and welfare can keep almost anyone alive Flaw: evolution depends on reproduction, not just survival. If people with certain genes have more than the average number of children, their genes will spread in the population.
Does “evolution” mean “improvement”?
• Evolution improves fitness, which is operationally defined as the number of copies of one’s genes that endure in later generations. if you reproduce and your children survive, then you increase your fitness. – does not directly mean improvement (example: colorful peacock atracs females (adaptive), but in face of a new predator, it becomes maladaptive)
Does evolution benefit the individual or the species?
• Neither, it benefits the genes (e.g. a gene that makes you sacrife yourself for your children benefits the genes, as your children carry them on and reproduce)
Does evolution benefit the individual or the species?
Neither, it benefits the genes (e.g. a gene that makes you sacrife yourself for your children benefits the genes, as your children carry them on and reproduce)
Does “evolution” mean “improvement”?
• Evolution improves fitness, which is operationally defined as the number of copies of one’s genes that endure in later generations. if you reproduce and your children survive, then you increase your fitness. – does not directly mean improvement (example: colorful peacock atracs females (adaptive), but in face of a new predator, it becomes maladaptive)
Have humans stopped evolving?
• idea: Because modern medicine and welfare can keep almost anyone alive Flaw: evolution depends on reproduction, not just survival. If people with certain genes have more than the average number of children, their genes will spread in the population.